RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
SNHG3-202ENST00000437681 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
SNHG3-202ENST00000437681 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.21
SNHG3-202ENST00000437681 TOM1O60784 492 aa16.33■□□□□ 0.2
SNHG3-202ENST00000437681 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
SNHG3-202ENST00000437681 FBXO41Q8TF61 875 aa16.31■□□□□ 0.2
SNHG3-202ENST00000437681 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
SNHG3-202ENST00000437681 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
SNHG3-202ENST00000437681 MST1RQ04912 1400 aa16.29■□□□□ 0.2
SNHG3-202ENST00000437681 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
SNHG3-202ENST00000437681 TOPAZ1Q8N9V7 1692 aa16.29■□□□□ 0.2
SNHG3-202ENST00000437681 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
SNHG3-202ENST00000437681 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
SNHG3-202ENST00000437681 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
SNHG3-202ENST00000437681 ATF3P18847 181 aa16.27■□□□□ 0.19
SNHG3-202ENST00000437681 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.19
SNHG3-202ENST00000437681 POGKQ9P215 609 aa16.26■□□□□ 0.19
SNHG3-202ENST00000437681 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
SNHG3-202ENST00000437681 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
SNHG3-202ENST00000437681 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
SNHG3-202ENST00000437681 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
SNHG3-202ENST00000437681 ROBO1Q9Y6N7 1651 aa16.25■□□□□ 0.19
SNHG3-202ENST00000437681 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
SNHG3-202ENST00000437681 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
SNHG3-202ENST00000437681 STK26Q9P289 416 aa16.23■□□□□ 0.19
SNHG3-202ENST00000437681 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
SNHG3-202ENST00000437681 NINLQ9Y2I6 1382 aa16.22■□□□□ 0.19
SNHG3-202ENST00000437681 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.19
SNHG3-202ENST00000437681 SLAIN2Q9P270 581 aa16.21■□□□□ 0.19
SNHG3-202ENST00000437681 USP47Q96K76 1375 aa16.21■□□□□ 0.18
SNHG3-202ENST00000437681 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
SNHG3-202ENST00000437681 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
SNHG3-202ENST00000437681 UBAP1LF5GYI3 381 aa16.19■□□□□ 0.18
SNHG3-202ENST00000437681 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
SNHG3-202ENST00000437681 ATP7BP35670 1465 aa16.19■□□□□ 0.18
SNHG3-202ENST00000437681 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
SNHG3-202ENST00000437681 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
SNHG3-202ENST00000437681 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
SNHG3-202ENST00000437681 PHLPP1O60346 1717 aa16.17■□□□□ 0.18
SNHG3-202ENST00000437681 SHPRHQ149N8 1683 aa16.17■□□□□ 0.18
SNHG3-202ENST00000437681 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
SNHG3-202ENST00000437681 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
SNHG3-202ENST00000437681 AKAP12Q02952 1782 aa16.15■□□□□ 0.18
SNHG3-202ENST00000437681 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
SNHG3-202ENST00000437681 POLR3AO14802 1390 aaPredicted RBP16.15■□□□□ 0.18
SNHG3-202ENST00000437681 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNHG3-202ENST00000437681 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
SNHG3-202ENST00000437681 TESK2Q96S53 571 aa16.14■□□□□ 0.17
SNHG3-202ENST00000437681 USP54Q70EL1 1684 aa16.13■□□□□ 0.17
SNHG3-202ENST00000437681 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
SNHG3-202ENST00000437681 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
SNHG3-202ENST00000437681 PXDNQ92626 1479 aa16.12■□□□□ 0.17
SNHG3-202ENST00000437681 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
SNHG3-202ENST00000437681 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
SNHG3-202ENST00000437681 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
SNHG3-202ENST00000437681 NPHP3Q7Z494 1330 aa16.12■□□□□ 0.17
SNHG3-202ENST00000437681 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
SNHG3-202ENST00000437681 TMF1P82094 1093 aa16.11■□□□□ 0.17
SNHG3-202ENST00000437681 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
SNHG3-202ENST00000437681 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
SNHG3-202ENST00000437681 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
SNHG3-202ENST00000437681 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
SNHG3-202ENST00000437681 NUDT16Q96DE0 195 aaKnown RBP16.09■□□□□ 0.17
SNHG3-202ENST00000437681 ALS2Q96Q42 1657 aa16.08■□□□□ 0.17
SNHG3-202ENST00000437681 NRKQ7Z2Y5 1582 aa16.08■□□□□ 0.16
SNHG3-202ENST00000437681 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
SNHG3-202ENST00000437681 PSME1Q06323 249 aa16.08■□□□□ 0.16
SNHG3-202ENST00000437681 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
SNHG3-202ENST00000437681 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
SNHG3-202ENST00000437681 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
SNHG3-202ENST00000437681 CPSF1Q10570 1443 aaKnown RBP16.07■□□□□ 0.16
SNHG3-202ENST00000437681 PPIP5K1Q6PFW1 1433 aa16.06■□□□□ 0.16
SNHG3-202ENST00000437681 MYOM1P52179 1685 aa16.06■□□□□ 0.16
SNHG3-202ENST00000437681 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
SNHG3-202ENST00000437681 JCADQ9P266 1359 aa16.05■□□□□ 0.16
SNHG3-202ENST00000437681 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
SNHG3-202ENST00000437681 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
SNHG3-202ENST00000437681 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
SNHG3-202ENST00000437681 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
SNHG3-202ENST00000437681 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
SNHG3-202ENST00000437681 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
SNHG3-202ENST00000437681 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
SNHG3-202ENST00000437681 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
SNHG3-202ENST00000437681 CRYBG1Q9Y4K1 1723 aa16.03■□□□□ 0.16
SNHG3-202ENST00000437681 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
SNHG3-202ENST00000437681 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNHG3-202ENST00000437681 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
SNHG3-202ENST00000437681 USP6P35125 1406 aa16.01■□□□□ 0.15
SNHG3-202ENST00000437681 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SNHG3-202ENST00000437681 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 ABCA3Q99758 1704 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 PIP4K2BP78356 416 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 ORAI2Q96SN7 254 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
SNHG3-202ENST00000437681 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
SNHG3-202ENST00000437681 ABCC6O95255 1503 aa16■□□□□ 0.15
SNHG3-202ENST00000437681 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
SNHG3-202ENST00000437681 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms