RNA–Protein interactions for RNA: ENST00000436883.5

PTPA-220, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4 BASIC

Gene PTPA, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-220ENST00000436883 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
PTPA-220ENST00000436883 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
PTPA-220ENST00000436883 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
PTPA-220ENST00000436883 WAPLQ7Z5K2 1190 aa23.19■■□□□ 1.3
PTPA-220ENST00000436883 NUTM2FA1L443 756 aa23.18■■□□□ 1.3
PTPA-220ENST00000436883 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
PTPA-220ENST00000436883 USP21Q9UK80 565 aa23.17■■□□□ 1.3
PTPA-220ENST00000436883 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
PTPA-220ENST00000436883 FOXO3O43524 673 aa23.16■■□□□ 1.3
PTPA-220ENST00000436883 XPCQ01831 940 aaPredicted RBP23.16■■□□□ 1.3
PTPA-220ENST00000436883 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
PTPA-220ENST00000436883 LAMC1P11047 1609 aa23.15■■□□□ 1.3
PTPA-220ENST00000436883 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
PTPA-220ENST00000436883 RGS12O14924 1447 aa23.13■■□□□ 1.29
PTPA-220ENST00000436883 TRPC5Q9UL62 973 aaPredicted RBP23.11■■□□□ 1.29
PTPA-220ENST00000436883 ABCC11Q96J66 1382 aa23.11■■□□□ 1.29
PTPA-220ENST00000436883 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
PTPA-220ENST00000436883 PLEKHH1Q9ULM0 1364 aa23.1■■□□□ 1.29
PTPA-220ENST00000436883 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
PTPA-220ENST00000436883 TECPR2O15040 1411 aa23.08■■□□□ 1.28
PTPA-220ENST00000436883 PIK3C2GO75747 1445 aa23.07■■□□□ 1.28
PTPA-220ENST00000436883 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
PTPA-220ENST00000436883 YTHDC2Q9H6S0 1430 aaKnown RBP23.06■■□□□ 1.28
PTPA-220ENST00000436883 PXDNQ92626 1479 aa23.05■■□□□ 1.28
PTPA-220ENST00000436883 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
PTPA-220ENST00000436883 C14orf93Q9H972 538 aaKnown RBP23.05■■□□□ 1.28
PTPA-220ENST00000436883 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
PTPA-220ENST00000436883 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
PTPA-220ENST00000436883 MYOM2P54296 1465 aa23.03■■□□□ 1.28
PTPA-220ENST00000436883 SAFB2Q14151 953 aaKnown RBP eCLIP23.02■■□□□ 1.28
PTPA-220ENST00000436883 KRT28Q7Z3Y7 464 aa23.02■■□□□ 1.28
PTPA-220ENST00000436883 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
PTPA-220ENST00000436883 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
PTPA-220ENST00000436883 ATAD2Q6PL18 1390 aa23.01■■□□□ 1.27
PTPA-220ENST00000436883 ATRNO75882 1429 aa23■■□□□ 1.27
PTPA-220ENST00000436883 KNDC1Q76NI1 1749 aa22.99■■□□□ 1.27
PTPA-220ENST00000436883 PLEKHG5O94827 1062 aa22.99■■□□□ 1.27
PTPA-220ENST00000436883 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
PTPA-220ENST00000436883 PRAM1Q96QH2 718 aa22.98■■□□□ 1.27
PTPA-220ENST00000436883 POGKQ9P215 609 aa22.98■■□□□ 1.27
PTPA-220ENST00000436883 PHF8Q9UPP1 1060 aa22.98■■□□□ 1.27
PTPA-220ENST00000436883 SPATA31A3Q5VYP0 1347 aa22.98■■□□□ 1.27
PTPA-220ENST00000436883 PSME1Q06323 249 aa22.97■■□□□ 1.27
PTPA-220ENST00000436883 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
PTPA-220ENST00000436883 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
PTPA-220ENST00000436883 LMOD2Q6P5Q4 547 aa22.96■■□□□ 1.27
PTPA-220ENST00000436883 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
PTPA-220ENST00000436883 RAB3GAP2Q9H2M9 1393 aa22.95■■□□□ 1.26
PTPA-220ENST00000436883 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
PTPA-220ENST00000436883 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
PTPA-220ENST00000436883 MARF1Q9Y4F3 1742 aaKnown RBP22.93■■□□□ 1.26
PTPA-220ENST00000436883 KIF1AQ12756 1690 aa22.93■■□□□ 1.26
PTPA-220ENST00000436883 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
PTPA-220ENST00000436883 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
PTPA-220ENST00000436883 RGPD8O14715 1765 aaPredicted RBP22.91■■□□□ 1.26
PTPA-220ENST00000436883 PMFBP1Q8TBY8 1022 aa22.9■■□□□ 1.26
PTPA-220ENST00000436883 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
PTPA-220ENST00000436883 HIRIP3Q9BW71 556 aaPredicted RBP22.88■■□□□ 1.25
PTPA-220ENST00000436883 TNS3Q68CZ2 1445 aa22.88■■□□□ 1.25
PTPA-220ENST00000436883 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
PTPA-220ENST00000436883 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
PTPA-220ENST00000436883 CCDC125Q86Z20 511 aa22.86■■□□□ 1.25
PTPA-220ENST00000436883 SLIT2O94813 1529 aa22.85■■□□□ 1.25
PTPA-220ENST00000436883 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
PTPA-220ENST00000436883 MINK1Q8N4C8 1332 aaPredicted RBP22.84■■□□□ 1.25
PTPA-220ENST00000436883 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
PTPA-220ENST00000436883 RALGAPBQ86X10 1494 aa22.84■■□□□ 1.25
PTPA-220ENST00000436883 ARHGEF10O15013 1369 aa22.83■■□□□ 1.25
PTPA-220ENST00000436883 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
PTPA-220ENST00000436883 USP32Q8NFA0 1604 aa22.82■■□□□ 1.24
PTPA-220ENST00000436883 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
PTPA-220ENST00000436883 ANKARQ7Z5J8 1434 aa22.81■■□□□ 1.24
PTPA-220ENST00000436883 VPS72Q15906 364 aa22.8■■□□□ 1.24
PTPA-220ENST00000436883 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
PTPA-220ENST00000436883 GPRASP1Q5JY77 1395 aa22.79■■□□□ 1.24
PTPA-220ENST00000436883 FAM83GA6ND36 823 aa22.79■■□□□ 1.24
PTPA-220ENST00000436883 GLI3P10071 1580 aa22.79■■□□□ 1.24
PTPA-220ENST00000436883 ADGRB1O14514 1584 aa22.77■■□□□ 1.24
PTPA-220ENST00000436883 A0A0G2JS52 829 aa22.77■■□□□ 1.24
PTPA-220ENST00000436883 WASLO00401 505 aaPredicted RBP22.77■■□□□ 1.24
PTPA-220ENST00000436883 MYT1Q01538 1121 aa22.77■■□□□ 1.24
PTPA-220ENST00000436883 NGDNQ8NEJ9 315 aaKnown RBP22.77■■□□□ 1.24
PTPA-220ENST00000436883 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
PTPA-220ENST00000436883 EP400Q96L91 3159 aa22.77■■□□□ 1.23
PTPA-220ENST00000436883 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
PTPA-220ENST00000436883 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
PTPA-220ENST00000436883 SF3B2Q13435 895 aaKnown RBP22.75■■□□□ 1.23
PTPA-220ENST00000436883 PRR36Q9H6K5 1346 aa22.75■■□□□ 1.23
PTPA-220ENST00000436883 ADGRB2O60241 1585 aa22.73■■□□□ 1.23
PTPA-220ENST00000436883 HRCP23327 699 aa22.73■■□□□ 1.23
PTPA-220ENST00000436883 BTG4Q9NY30 223 aa22.73■■□□□ 1.23
PTPA-220ENST00000436883 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
PTPA-220ENST00000436883 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
PTPA-220ENST00000436883 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
PTPA-220ENST00000436883 BRWD3Q6RI45 1802 aa22.71■■□□□ 1.23
PTPA-220ENST00000436883 ONECUT3O60422 494 aaPredicted RBP22.71■■□□□ 1.23
PTPA-220ENST00000436883 DEFB132Q7Z7B7 95 aa22.7■■□□□ 1.22
PTPA-220ENST00000436883 TULP4Q9NRJ4 1543 aa22.7■■□□□ 1.22
PTPA-220ENST00000436883 NWD2Q9ULI1 1742 aa22.7■■□□□ 1.22
PTPA-220ENST00000436883 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms