RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
YBX1-203ENST00000436427 MINK1Q8N4C8 1332 aaPredicted RBP29.72■■■□□ 2.35
YBX1-203ENST00000436427 NWD1Q149M9 1564 aa29.68■■■□□ 2.34
YBX1-203ENST00000436427 CDCA8Q53HL2 280 aa29.67■■■□□ 2.34
YBX1-203ENST00000436427 EVC2Q86UK5 1308 aa29.66■■■□□ 2.34
YBX1-203ENST00000436427 DDX10Q13206 875 aaKnown RBP29.66■■■□□ 2.34
YBX1-203ENST00000436427 DMRT2Q9Y5R5 561 aa29.66■■■□□ 2.34
YBX1-203ENST00000436427 TULP4Q9NRJ4 1543 aa29.65■■■□□ 2.34
YBX1-203ENST00000436427 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.61■■■□□ 2.33
YBX1-203ENST00000436427 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
YBX1-203ENST00000436427 SRPK2P78362 688 aaKnown RBP29.58■■■□□ 2.33
YBX1-203ENST00000436427 DIEXFQ68CQ4 756 aaKnown RBP29.58■■■□□ 2.33
YBX1-203ENST00000436427 STRCP1A6NGW2 1772 aa29.57■■■□□ 2.32
YBX1-203ENST00000436427 RBM33Q96EV2 1170 aaKnown RBP29.56■■■□□ 2.32
YBX1-203ENST00000436427 CDK19Q9BWU1 502 aa29.56■■■□□ 2.32
YBX1-203ENST00000436427 CABP2Q9NPB3 220 aa29.56■■■□□ 2.32
YBX1-203ENST00000436427 ADGRB2O60241 1585 aa29.56■■■□□ 2.32
YBX1-203ENST00000436427 PROSER2Q86WR7 435 aaPredicted RBP29.55■■■□□ 2.32
YBX1-203ENST00000436427 WASLO00401 505 aaPredicted RBP29.54■■■□□ 2.32
YBX1-203ENST00000436427 ZNF335Q9H4Z2 1342 aaPredicted RBP29.53■■■□□ 2.32
YBX1-203ENST00000436427 PUS7Q96PZ0 661 aaKnown RBP29.51■■■□□ 2.32
YBX1-203ENST00000436427 C14orf37Q86TY3 774 aa29.5■■■□□ 2.31
YBX1-203ENST00000436427 NALCNQ8IZF0 1738 aa29.5■■■□□ 2.31
YBX1-203ENST00000436427 MYOM1P52179 1685 aa29.5■■■□□ 2.31
YBX1-203ENST00000436427 ATAD2Q6PL18 1390 aa29.48■■■□□ 2.31
YBX1-203ENST00000436427 ADGRL3Q9HAR2 1447 aa29.47■■■□□ 2.31
YBX1-203ENST00000436427 TMC1Q8TDI8 760 aa29.47■■■□□ 2.31
YBX1-203ENST00000436427 TMEM94Q12767 1356 aa29.45■■■□□ 2.31
YBX1-203ENST00000436427 CDC42BPGQ6DT37 1551 aa29.43■■■□□ 2.3
YBX1-203ENST00000436427 NUTM2FA1L443 756 aa29.41■■■□□ 2.3
YBX1-203ENST00000436427 NUDT16Q96DE0 195 aaKnown RBP29.41■■■□□ 2.3
YBX1-203ENST00000436427 PANK3Q9H999 370 aa29.41■■■□□ 2.3
YBX1-203ENST00000436427 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
YBX1-203ENST00000436427 ATP7BP35670 1465 aa29.39■■■□□ 2.3
YBX1-203ENST00000436427 NCOA3Q9Y6Q9 1424 aa29.39■■■□□ 2.3
YBX1-203ENST00000436427 NINLQ9Y2I6 1382 aa29.39■■■□□ 2.3
YBX1-203ENST00000436427 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.29
YBX1-203ENST00000436427 FMN2Q9NZ56 1722 aa29.38■■■□□ 2.29
YBX1-203ENST00000436427 PRR36Q9H6K5 1346 aa29.37■■■□□ 2.29
YBX1-203ENST00000436427 C19orf44Q9H6X5 657 aa29.36■■■□□ 2.29
YBX1-203ENST00000436427 PPIP5K1Q6PFW1 1433 aa29.36■■■□□ 2.29
YBX1-203ENST00000436427 CABP1Q9NZU7 370 aa29.35■■■□□ 2.29
YBX1-203ENST00000436427 CCDC61Q9Y6R9 512 aa29.35■■■□□ 2.29
YBX1-203ENST00000436427 USP32Q8NFA0 1604 aa29.34■■■□□ 2.29
YBX1-203ENST00000436427 XIRP1Q702N8 1843 aaKnown RBP29.34■■■□□ 2.29
YBX1-203ENST00000436427 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
YBX1-203ENST00000436427 MSH6P52701 1360 aa29.32■■■□□ 2.28
YBX1-203ENST00000436427 TOPAZ1Q8N9V7 1692 aa29.32■■■□□ 2.28
YBX1-203ENST00000436427 ANKRD36BQ8N2N9 1353 aa29.31■■■□□ 2.28
YBX1-203ENST00000436427 ITSN1Q15811 1721 aa29.3■■■□□ 2.28
YBX1-203ENST00000436427 ATF3P18847 181 aa29.3■■■□□ 2.28
YBX1-203ENST00000436427 TERF2IPQ9NYB0 399 aa29.3■■■□□ 2.28
YBX1-203ENST00000436427 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
YBX1-203ENST00000436427 DCCP43146 1447 aa29.29■■■□□ 2.28
YBX1-203ENST00000436427 HDGFL2Q7Z4V5 671 aaPredicted RBP29.28■■■□□ 2.28
YBX1-203ENST00000436427 A0A1W2PP64 1363 aa29.27■■■□□ 2.28
YBX1-203ENST00000436427 PER1O15534 1290 aaPredicted RBP29.27■■■□□ 2.28
YBX1-203ENST00000436427 KNSTRNQ9Y448 316 aa29.27■■■□□ 2.28
YBX1-203ENST00000436427 CD163L1Q9NR16 1453 aa29.26■■■□□ 2.27
YBX1-203ENST00000436427 LTBP4Q8N2S1 1624 aa29.26■■■□□ 2.27
YBX1-203ENST00000436427 ANP32CO43423 234 aa29.25■■■□□ 2.27
YBX1-203ENST00000436427 CNGB1Q14028 1251 aaPredicted RBP29.25■■■□□ 2.27
YBX1-203ENST00000436427 CARD14Q9BXL6 1004 aa29.25■■■□□ 2.27
YBX1-203ENST00000436427 CADPS2Q86UW7 1296 aa29.24■■■□□ 2.27
YBX1-203ENST00000436427 NSD3Q9BZ95 1437 aa29.23■■■□□ 2.27
YBX1-203ENST00000436427 PLEKHG3A1L390 1219 aa29.22■■■□□ 2.27
YBX1-203ENST00000436427 PMFBP1Q8TBY8 1022 aa29.22■■■□□ 2.27
YBX1-203ENST00000436427 ACEP12821 1306 aa29.2■■■□□ 2.27
YBX1-203ENST00000436427 ESCO1Q5FWF5 840 aa29.2■■■□□ 2.27
YBX1-203ENST00000436427 CPSF1Q10570 1443 aaKnown RBP29.2■■■□□ 2.26
YBX1-203ENST00000436427 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.26
YBX1-203ENST00000436427 MIER1Q8N108 512 aa29.2■■■□□ 2.26
YBX1-203ENST00000436427 C1orf167Q5SNV9 1468 aa29.19■■■□□ 2.26
YBX1-203ENST00000436427 MST1RQ04912 1400 aa29.19■■■□□ 2.26
YBX1-203ENST00000436427 NGDNQ8NEJ9 315 aaKnown RBP29.18■■■□□ 2.26
YBX1-203ENST00000436427 PHF8Q9UPP1 1060 aa29.18■■■□□ 2.26
YBX1-203ENST00000436427 AKAP12Q02952 1782 aa29.17■■■□□ 2.26
YBX1-203ENST00000436427 CC2D1BQ5T0F9 858 aaKnown RBP29.16■■■□□ 2.26
YBX1-203ENST00000436427 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
YBX1-203ENST00000436427 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
YBX1-203ENST00000436427 AMER1Q5JTC6 1135 aaPredicted RBP29.15■■■□□ 2.26
YBX1-203ENST00000436427 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.26
YBX1-203ENST00000436427 POLR3AO14802 1390 aaPredicted RBP29.14■■■□□ 2.26
YBX1-203ENST00000436427 PRKRIP1Q9H875 184 aaPredicted RBP29.14■■■□□ 2.25
YBX1-203ENST00000436427 CGNL1Q0VF96 1302 aa29.13■■■□□ 2.25
YBX1-203ENST00000436427 EDC4Q6P2E9 1401 aaKnown RBP29.11■■■□□ 2.25
YBX1-203ENST00000436427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.1■■■□□ 2.25
YBX1-203ENST00000436427 USP6P35125 1406 aa29.1■■■□□ 2.25
YBX1-203ENST00000436427 NPC1L1Q9UHC9 1359 aa29.1■■■□□ 2.25
YBX1-203ENST00000436427 KIF1AQ12756 1690 aa29.09■■■□□ 2.25
YBX1-203ENST00000436427 SLAIN2Q9P270 581 aa29.08■■■□□ 2.25
YBX1-203ENST00000436427 NRKQ7Z2Y5 1582 aa29.06■■■□□ 2.24
YBX1-203ENST00000436427 RALBP1Q15311 655 aa29.05■■■□□ 2.24
YBX1-203ENST00000436427 KIF20BQ96Q89 1820 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 NSD2O96028 1365 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 PARD3Q8TEW0 1356 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 FOXO3O43524 673 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 PSME1Q06323 249 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 TTC21BQ7Z4L5 1316 aa29.04■■■□□ 2.24
YBX1-203ENST00000436427 FYB1O15117 783 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms