RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ABCC3O15438 1527 aa13.57□□□□□ -0.24
CLSTN1-203ENST00000435891 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
CLSTN1-203ENST00000435891 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 WWC1Q8IX03 1113 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 HECW2Q9P2P5 1572 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 E9PSI1 815 aa13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-203ENST00000435891 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.55□□□□□ -0.24
CLSTN1-203ENST00000435891 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
CLSTN1-203ENST00000435891 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
CLSTN1-203ENST00000435891 MTHFSP49914 203 aa13.54□□□□□ -0.24
CLSTN1-203ENST00000435891 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-203ENST00000435891 RGS3P49796 1198 aa13.53□□□□□ -0.24
CLSTN1-203ENST00000435891 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
CLSTN1-203ENST00000435891 IDI1Q13907 227 aa13.52□□□□□ -0.25
CLSTN1-203ENST00000435891 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
CLSTN1-203ENST00000435891 PANK1Q8TE04 598 aa13.52□□□□□ -0.25
CLSTN1-203ENST00000435891 CAMSAP1Q5T5Y3 1602 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 GLI2P10070 1586 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 IGHDP01880 384 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
CLSTN1-203ENST00000435891 STK26Q9P289 416 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 CFAP74Q9C0B2 1584 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 NEXMIFQ5QGS0 1516 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
CLSTN1-203ENST00000435891 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
CLSTN1-203ENST00000435891 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
CLSTN1-203ENST00000435891 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
CLSTN1-203ENST00000435891 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
CLSTN1-203ENST00000435891 DIP2CQ9Y2E4 1556 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 NEFMP07197 916 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
CLSTN1-203ENST00000435891 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
CLSTN1-203ENST00000435891 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
CLSTN1-203ENST00000435891 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
CLSTN1-203ENST00000435891 RLBP1P12271 317 aa13.46□□□□□ -0.25
CLSTN1-203ENST00000435891 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
CLSTN1-203ENST00000435891 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.26
CLSTN1-203ENST00000435891 NEO1Q92859 1461 aa13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 GGNBP2Q9H3C7 697 aa13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
CLSTN1-203ENST00000435891 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
CLSTN1-203ENST00000435891 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CLSTN1-203ENST00000435891 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
CLSTN1-203ENST00000435891 RICTORQ6R327 1708 aa13.42□□□□□ -0.26
CLSTN1-203ENST00000435891 ARHGAP31Q2M1Z3 1444 aa13.42□□□□□ -0.26
CLSTN1-203ENST00000435891 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
CLSTN1-203ENST00000435891 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
CLSTN1-203ENST00000435891 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
CLSTN1-203ENST00000435891 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
CLSTN1-203ENST00000435891 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-203ENST00000435891 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-203ENST00000435891 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
CLSTN1-203ENST00000435891 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
CLSTN1-203ENST00000435891 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
CLSTN1-203ENST00000435891 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
CLSTN1-203ENST00000435891 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
CLSTN1-203ENST00000435891 PTPRMP28827 1452 aa13.4□□□□□ -0.27
CLSTN1-203ENST00000435891 FYB1O15117 783 aa13.39□□□□□ -0.27
CLSTN1-203ENST00000435891 SEC24BO95487 1268 aa13.39□□□□□ -0.27
CLSTN1-203ENST00000435891 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
CLSTN1-203ENST00000435891 NSD2O96028 1365 aa13.39□□□□□ -0.27
CLSTN1-203ENST00000435891 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 ZFYVE9O95405 1425 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 FBLN1P23142 703 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 CD163L1Q9NR16 1453 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 USP19O94966 1318 aa13.38□□□□□ -0.27
CLSTN1-203ENST00000435891 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 POGKQ9P215 609 aa13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 PREX1Q8TCU6 1659 aa13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 YTHDC2Q9H6S0 1430 aaKnown RBP13.37□□□□□ -0.27
CLSTN1-203ENST00000435891 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
CLSTN1-203ENST00000435891 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
CLSTN1-203ENST00000435891 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
CLSTN1-203ENST00000435891 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
CLSTN1-203ENST00000435891 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms