RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 NUTM2AQ8IVF1 878 aaPredicted RBP25.47■■□□□ 1.67
SREBF2-203ENST00000435061 C14orf93Q9H972 538 aaKnown RBP25.46■■□□□ 1.67
SREBF2-203ENST00000435061 SOS2Q07890 1332 aaPredicted RBP25.44■■□□□ 1.66
SREBF2-203ENST00000435061 WAPLQ7Z5K2 1190 aa25.44■■□□□ 1.66
SREBF2-203ENST00000435061 SIRT1Q96EB6 747 aa25.44■■□□□ 1.66
SREBF2-203ENST00000435061 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
SREBF2-203ENST00000435061 NRXN1Q9ULB1 1477 aa25.43■■□□□ 1.66
SREBF2-203ENST00000435061 LAMC1P11047 1609 aa25.43■■□□□ 1.66
SREBF2-203ENST00000435061 CDC42BPGQ6DT37 1551 aa25.43■■□□□ 1.66
SREBF2-203ENST00000435061 MYOM2P54296 1465 aa25.42■■□□□ 1.66
SREBF2-203ENST00000435061 YTHDC2Q9H6S0 1430 aaKnown RBP25.42■■□□□ 1.66
SREBF2-203ENST00000435061 ESCO1Q5FWF5 840 aa25.4■■□□□ 1.66
SREBF2-203ENST00000435061 CFAP70Q5T0N1 1121 aa25.39■■□□□ 1.66
SREBF2-203ENST00000435061 DHX57Q6P158 1386 aaKnown RBP25.39■■□□□ 1.65
SREBF2-203ENST00000435061 PLEKHH1Q9ULM0 1364 aa25.38■■□□□ 1.65
SREBF2-203ENST00000435061 NPHP3Q7Z494 1330 aa25.37■■□□□ 1.65
SREBF2-203ENST00000435061 KNDC1Q76NI1 1749 aa25.37■■□□□ 1.65
SREBF2-203ENST00000435061 AFF2P51816 1311 aa25.35■■□□□ 1.65
SREBF2-203ENST00000435061 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
SREBF2-203ENST00000435061 RXRBP28702 533 aa25.33■■□□□ 1.65
SREBF2-203ENST00000435061 C8orf37Q96NL8 207 aa25.33■■□□□ 1.65
SREBF2-203ENST00000435061 FOXO3O43524 673 aa25.32■■□□□ 1.64
SREBF2-203ENST00000435061 NUTM2FA1L443 756 aa25.31■■□□□ 1.64
SREBF2-203ENST00000435061 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
SREBF2-203ENST00000435061 DCAF11Q8TEB1 546 aa25.28■■□□□ 1.64
SREBF2-203ENST00000435061 NGLY1Q96IV0 654 aa25.28■■□□□ 1.64
SREBF2-203ENST00000435061 PRAM1Q96QH2 718 aa25.28■■□□□ 1.64
SREBF2-203ENST00000435061 PXDNQ92626 1479 aa25.28■■□□□ 1.64
SREBF2-203ENST00000435061 KDM2AQ9Y2K7 1162 aa25.27■■□□□ 1.64
SREBF2-203ENST00000435061 QTRT2Q9H974 415 aaKnown RBP25.25■■□□□ 1.63
SREBF2-203ENST00000435061 POGKQ9P215 609 aa25.25■■□□□ 1.63
SREBF2-203ENST00000435061 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
SREBF2-203ENST00000435061 DLC1Q96QB1 1528 aa25.25■■□□□ 1.63
SREBF2-203ENST00000435061 FMN2Q9NZ56 1722 aa25.24■■□□□ 1.63
SREBF2-203ENST00000435061 XPCQ01831 940 aaPredicted RBP25.24■■□□□ 1.63
SREBF2-203ENST00000435061 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
SREBF2-203ENST00000435061 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
SREBF2-203ENST00000435061 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
SREBF2-203ENST00000435061 SAFB2Q14151 953 aaKnown RBP eCLIP25.22■■□□□ 1.63
SREBF2-203ENST00000435061 FNBP4Q8N3X1 1017 aaPredicted RBP25.2■■□□□ 1.62
SREBF2-203ENST00000435061 PHF8Q9UPP1 1060 aa25.2■■□□□ 1.62
SREBF2-203ENST00000435061 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
SREBF2-203ENST00000435061 KRT28Q7Z3Y7 464 aa25.19■■□□□ 1.62
SREBF2-203ENST00000435061 USP21Q9UK80 565 aa25.19■■□□□ 1.62
SREBF2-203ENST00000435061 KIF1AQ12756 1690 aa25.19■■□□□ 1.62
SREBF2-203ENST00000435061 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
SREBF2-203ENST00000435061 PSME1Q06323 249 aa25.17■■□□□ 1.62
SREBF2-203ENST00000435061 TRPC5Q9UL62 973 aaPredicted RBP25.16■■□□□ 1.62
SREBF2-203ENST00000435061 ANKARQ7Z5J8 1434 aa25.15■■□□□ 1.62
SREBF2-203ENST00000435061 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
SREBF2-203ENST00000435061 EIF3AQ14152 1382 aaKnown RBP25.12■■□□□ 1.61
SREBF2-203ENST00000435061 ADGRB2O60241 1585 aa25.12■■□□□ 1.61
SREBF2-203ENST00000435061 RGS12O14924 1447 aa25.11■■□□□ 1.61
SREBF2-203ENST00000435061 MINK1Q8N4C8 1332 aaPredicted RBP25.11■■□□□ 1.61
SREBF2-203ENST00000435061 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
SREBF2-203ENST00000435061 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
SREBF2-203ENST00000435061 WASLO00401 505 aaPredicted RBP25.09■■□□□ 1.61
SREBF2-203ENST00000435061 TNS3Q68CZ2 1445 aa25.09■■□□□ 1.61
SREBF2-203ENST00000435061 RGPD8O14715 1765 aaPredicted RBP25.08■■□□□ 1.61
SREBF2-203ENST00000435061 ATRNO75882 1429 aa25.08■■□□□ 1.61
SREBF2-203ENST00000435061 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
SREBF2-203ENST00000435061 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
SREBF2-203ENST00000435061 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
SREBF2-203ENST00000435061 USP32Q8NFA0 1604 aa25.04■■□□□ 1.6
SREBF2-203ENST00000435061 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
SREBF2-203ENST00000435061 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
SREBF2-203ENST00000435061 HAP1P54257 671 aaPredicted RBP25.03■■□□□ 1.6
SREBF2-203ENST00000435061 PRR36Q9H6K5 1346 aa25.03■■□□□ 1.6
SREBF2-203ENST00000435061 LMOD2Q6P5Q4 547 aa25.02■■□□□ 1.6
SREBF2-203ENST00000435061 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
SREBF2-203ENST00000435061 GPRASP1Q5JY77 1395 aa25.02■■□□□ 1.6
SREBF2-203ENST00000435061 GJD4Q96KN9 370 aaPredicted RBP25.01■■□□□ 1.59
SREBF2-203ENST00000435061 CABLES1Q8TDN4 633 aa25■■□□□ 1.59
SREBF2-203ENST00000435061 SLIT2O94813 1529 aa25■■□□□ 1.59
SREBF2-203ENST00000435061 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
SREBF2-203ENST00000435061 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
SREBF2-203ENST00000435061 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
SREBF2-203ENST00000435061 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
SREBF2-203ENST00000435061 NBPF1Q3BBV0 1214 aa24.96■■□□□ 1.59
SREBF2-203ENST00000435061 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
SREBF2-203ENST00000435061 CDK19Q9BWU1 502 aa24.95■■□□□ 1.58
SREBF2-203ENST00000435061 PLEKHG5O94827 1062 aa24.94■■□□□ 1.58
SREBF2-203ENST00000435061 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.94■■□□□ 1.58
SREBF2-203ENST00000435061 ATP7BP35670 1465 aa24.91■■□□□ 1.58
SREBF2-203ENST00000435061 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
SREBF2-203ENST00000435061 VPS72Q15906 364 aa24.91■■□□□ 1.58
SREBF2-203ENST00000435061 L3MBTL2Q969R5 705 aa24.91■■□□□ 1.58
SREBF2-203ENST00000435061 TRPM3Q9HCF6 1732 aaPredicted RBP24.91■■□□□ 1.58
SREBF2-203ENST00000435061 RALGAPBQ86X10 1494 aa24.9■■□□□ 1.58
SREBF2-203ENST00000435061 CCDC61Q9Y6R9 512 aa24.9■■□□□ 1.58
SREBF2-203ENST00000435061 PAK3O75914 559 aaPredicted RBP24.89■■□□□ 1.58
SREBF2-203ENST00000435061 SIN3AQ96ST3 1273 aa24.87■■□□□ 1.57
SREBF2-203ENST00000435061 ALS2Q96Q42 1657 aa24.87■■□□□ 1.57
SREBF2-203ENST00000435061 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
SREBF2-203ENST00000435061 PLEKHG3A1L390 1219 aa24.86■■□□□ 1.57
SREBF2-203ENST00000435061 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
SREBF2-203ENST00000435061 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
SREBF2-203ENST00000435061 POLR3AO14802 1390 aaPredicted RBP24.85■■□□□ 1.57
SREBF2-203ENST00000435061 NWD2Q9ULI1 1742 aa24.85■■□□□ 1.57
SREBF2-203ENST00000435061 GLI3P10071 1580 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms