RNA–Protein interactions for RNA: ENST00000434927.5

RBM39-214, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-214ENST00000434927 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
RBM39-214ENST00000434927 KNDC1Q76NI1 1749 aa13.9□□□□□ -0.18
RBM39-214ENST00000434927 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.18
RBM39-214ENST00000434927 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
RBM39-214ENST00000434927 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
RBM39-214ENST00000434927 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
RBM39-214ENST00000434927 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
RBM39-214ENST00000434927 RGL3Q3MIN7 710 aa13.87□□□□□ -0.19
RBM39-214ENST00000434927 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
RBM39-214ENST00000434927 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
RBM39-214ENST00000434927 RBM6P78332 1123 aaKnown RBP13.86□□□□□ -0.19
RBM39-214ENST00000434927 MYOM2P54296 1465 aa13.86□□□□□ -0.19
RBM39-214ENST00000434927 PXDNQ92626 1479 aa13.86□□□□□ -0.19
RBM39-214ENST00000434927 RGS12O14924 1447 aa13.85□□□□□ -0.19
RBM39-214ENST00000434927 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
RBM39-214ENST00000434927 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
RBM39-214ENST00000434927 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
RBM39-214ENST00000434927 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
RBM39-214ENST00000434927 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
RBM39-214ENST00000434927 FNBP4Q8N3X1 1017 aaPredicted RBP13.83□□□□□ -0.2
RBM39-214ENST00000434927 NGLY1Q96IV0 654 aa13.83□□□□□ -0.2
RBM39-214ENST00000434927 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
RBM39-214ENST00000434927 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.2
RBM39-214ENST00000434927 ADAMTS2O95450 1211 aa13.82□□□□□ -0.2
RBM39-214ENST00000434927 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
RBM39-214ENST00000434927 STK26Q9P289 416 aa13.82□□□□□ -0.2
RBM39-214ENST00000434927 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
RBM39-214ENST00000434927 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
RBM39-214ENST00000434927 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
RBM39-214ENST00000434927 FOXO3O43524 673 aa13.8□□□□□ -0.2
RBM39-214ENST00000434927 USP21Q9UK80 565 aa13.8□□□□□ -0.2
RBM39-214ENST00000434927 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
RBM39-214ENST00000434927 ATRNO75882 1429 aa13.8□□□□□ -0.2
RBM39-214ENST00000434927 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
RBM39-214ENST00000434927 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
RBM39-214ENST00000434927 RAB3GAP2Q9H2M9 1393 aa13.78□□□□□ -0.2
RBM39-214ENST00000434927 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.21
RBM39-214ENST00000434927 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
RBM39-214ENST00000434927 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
RBM39-214ENST00000434927 XPCQ01831 940 aaPredicted RBP13.76□□□□□ -0.21
RBM39-214ENST00000434927 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
RBM39-214ENST00000434927 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
RBM39-214ENST00000434927 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
RBM39-214ENST00000434927 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
RBM39-214ENST00000434927 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
RBM39-214ENST00000434927 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
RBM39-214ENST00000434927 SLIT2O94813 1529 aa13.74□□□□□ -0.21
RBM39-214ENST00000434927 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
RBM39-214ENST00000434927 USP32Q8NFA0 1604 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 HRCP23327 699 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
RBM39-214ENST00000434927 SBNO1A3KN83 1393 aa13.72□□□□□ -0.21
RBM39-214ENST00000434927 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
RBM39-214ENST00000434927 PSME1Q06323 249 aa13.71□□□□□ -0.21
RBM39-214ENST00000434927 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
RBM39-214ENST00000434927 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
RBM39-214ENST00000434927 ARHGEF10O15013 1369 aa13.7□□□□□ -0.22
RBM39-214ENST00000434927 POGKQ9P215 609 aa13.69□□□□□ -0.22
RBM39-214ENST00000434927 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
RBM39-214ENST00000434927 ABCA3Q99758 1704 aa13.68□□□□□ -0.22
RBM39-214ENST00000434927 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
RBM39-214ENST00000434927 GLI3P10071 1580 aa13.68□□□□□ -0.22
RBM39-214ENST00000434927 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
RBM39-214ENST00000434927 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
RBM39-214ENST00000434927 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
RBM39-214ENST00000434927 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
RBM39-214ENST00000434927 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
RBM39-214ENST00000434927 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
RBM39-214ENST00000434927 EP400Q96L91 3159 aa13.66□□□□□ -0.22
RBM39-214ENST00000434927 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
RBM39-214ENST00000434927 TRAK1Q9UPV9 953 aa13.65□□□□□ -0.22
RBM39-214ENST00000434927 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
RBM39-214ENST00000434927 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
RBM39-214ENST00000434927 VPS72Q15906 364 aa13.64□□□□□ -0.23
RBM39-214ENST00000434927 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
RBM39-214ENST00000434927 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
RBM39-214ENST00000434927 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
RBM39-214ENST00000434927 WASLO00401 505 aaPredicted RBP13.63□□□□□ -0.23
RBM39-214ENST00000434927 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
RBM39-214ENST00000434927 PMFBP1Q8TBY8 1022 aa13.63□□□□□ -0.23
RBM39-214ENST00000434927 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
RBM39-214ENST00000434927 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
RBM39-214ENST00000434927 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
RBM39-214ENST00000434927 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
RBM39-214ENST00000434927 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
RBM39-214ENST00000434927 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
RBM39-214ENST00000434927 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
RBM39-214ENST00000434927 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
RBM39-214ENST00000434927 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
RBM39-214ENST00000434927 ATP7BP35670 1465 aa13.61□□□□□ -0.23
RBM39-214ENST00000434927 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
RBM39-214ENST00000434927 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
RBM39-214ENST00000434927 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
RBM39-214ENST00000434927 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
RBM39-214ENST00000434927 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
RBM39-214ENST00000434927 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
RBM39-214ENST00000434927 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms