RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
CTSD-204ENST00000433655 EVC2Q86UK5 1308 aa22.45■■□□□ 1.18
CTSD-204ENST00000433655 GOLGA2Q08379 1002 aa22.44■■□□□ 1.18
CTSD-204ENST00000433655 ANKRD36BQ8N2N9 1353 aa22.44■■□□□ 1.18
CTSD-204ENST00000433655 ANP32EQ9BTT0 268 aa22.43■■□□□ 1.18
CTSD-204ENST00000433655 APAF1O14727 1248 aa22.43■■□□□ 1.18
CTSD-204ENST00000433655 SLFN5Q08AF3 891 aa22.43■■□□□ 1.18
CTSD-204ENST00000433655 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
CTSD-204ENST00000433655 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
CTSD-204ENST00000433655 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
CTSD-204ENST00000433655 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
CTSD-204ENST00000433655 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
CTSD-204ENST00000433655 CABP2Q9NPB3 220 aa22.4■■□□□ 1.18
CTSD-204ENST00000433655 SPINK5Q9NQ38 1064 aaPredicted RBP22.4■■□□□ 1.18
CTSD-204ENST00000433655 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.18
CTSD-204ENST00000433655 CRBNQ96SW2 442 aa22.39■■□□□ 1.17
CTSD-204ENST00000433655 MYT1Q01538 1121 aa22.38■■□□□ 1.17
CTSD-204ENST00000433655 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
CTSD-204ENST00000433655 CGNL1Q0VF96 1302 aa22.38■■□□□ 1.17
CTSD-204ENST00000433655 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
CTSD-204ENST00000433655 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
CTSD-204ENST00000433655 IQSEC2Q5JU85 1478 aa22.37■■□□□ 1.17
CTSD-204ENST00000433655 SAFB2Q14151 953 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSD-204ENST00000433655 C20orf194Q5TEA3 1177 aa22.37■■□□□ 1.17
CTSD-204ENST00000433655 STK26Q9P289 416 aa22.37■■□□□ 1.17
CTSD-204ENST00000433655 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
CTSD-204ENST00000433655 NSD2O96028 1365 aa22.36■■□□□ 1.17
CTSD-204ENST00000433655 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
CTSD-204ENST00000433655 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
CTSD-204ENST00000433655 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
CTSD-204ENST00000433655 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
CTSD-204ENST00000433655 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
CTSD-204ENST00000433655 NINLQ9Y2I6 1382 aa22.34■■□□□ 1.17
CTSD-204ENST00000433655 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
CTSD-204ENST00000433655 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
CTSD-204ENST00000433655 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
CTSD-204ENST00000433655 ABCC11Q96J66 1382 aa22.33■■□□□ 1.17
CTSD-204ENST00000433655 PRAM1Q96QH2 718 aa22.32■■□□□ 1.16
CTSD-204ENST00000433655 MTHFSP49914 203 aa22.31■■□□□ 1.16
CTSD-204ENST00000433655 MINK1Q8N4C8 1332 aaPredicted RBP22.3■■□□□ 1.16
CTSD-204ENST00000433655 E9PSI1 815 aa22.3■■□□□ 1.16
CTSD-204ENST00000433655 ATAD2Q6PL18 1390 aa22.29■■□□□ 1.16
CTSD-204ENST00000433655 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
CTSD-204ENST00000433655 NLRP1Q9C000 1473 aa22.29■■□□□ 1.16
CTSD-204ENST00000433655 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
CTSD-204ENST00000433655 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
CTSD-204ENST00000433655 WWC1Q8IX03 1113 aa22.28■■□□□ 1.16
CTSD-204ENST00000433655 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
CTSD-204ENST00000433655 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
CTSD-204ENST00000433655 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
CTSD-204ENST00000433655 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
CTSD-204ENST00000433655 STAG3Q9UJ98 1225 aa22.26■■□□□ 1.15
CTSD-204ENST00000433655 MED14O60244 1454 aa22.25■■□□□ 1.15
CTSD-204ENST00000433655 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
CTSD-204ENST00000433655 POGKQ9P215 609 aa22.24■■□□□ 1.15
CTSD-204ENST00000433655 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
CTSD-204ENST00000433655 MLECQ14165 292 aa22.24■■□□□ 1.15
CTSD-204ENST00000433655 TCERG1O14776 1098 aaKnown RBP22.23■■□□□ 1.15
CTSD-204ENST00000433655 CFAP53Q96M91 514 aa22.23■■□□□ 1.15
CTSD-204ENST00000433655 KDM2BQ8NHM5 1336 aa22.23■■□□□ 1.15
CTSD-204ENST00000433655 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
CTSD-204ENST00000433655 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
CTSD-204ENST00000433655 BCAR3O75815 825 aa22.21■■□□□ 1.15
CTSD-204ENST00000433655 RRP7AQ9Y3A4 280 aaKnown RBP22.21■■□□□ 1.15
CTSD-204ENST00000433655 CDK19Q9BWU1 502 aa22.2■■□□□ 1.14
CTSD-204ENST00000433655 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
CTSD-204ENST00000433655 FYB1O15117 783 aa22.19■■□□□ 1.14
CTSD-204ENST00000433655 TERF2IPQ9NYB0 399 aa22.19■■□□□ 1.14
CTSD-204ENST00000433655 SKAP1Q86WV1 359 aa22.18■■□□□ 1.14
CTSD-204ENST00000433655 MS4A1P11836 297 aa22.17■■□□□ 1.14
CTSD-204ENST00000433655 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
CTSD-204ENST00000433655 ZMYM3Q14202 1370 aa22.17■■□□□ 1.14
CTSD-204ENST00000433655 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
CTSD-204ENST00000433655 CCDC27Q2M243 656 aa22.16■■□□□ 1.14
CTSD-204ENST00000433655 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
CTSD-204ENST00000433655 ATP7BP35670 1465 aa22.15■■□□□ 1.14
CTSD-204ENST00000433655 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.14
CTSD-204ENST00000433655 WDR63Q8IWG1 891 aa22.14■■□□□ 1.14
CTSD-204ENST00000433655 CABP1Q9NZU7 370 aa22.14■■□□□ 1.13
CTSD-204ENST00000433655 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
CTSD-204ENST00000433655 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.13
CTSD-204ENST00000433655 UBR1Q8IWV7 1749 aa22.13■■□□□ 1.13
CTSD-204ENST00000433655 METP08581 1390 aa22.13■■□□□ 1.13
CTSD-204ENST00000433655 PDE4AP27815 886 aa22.13■■□□□ 1.13
CTSD-204ENST00000433655 CENPQQ7L2Z9 268 aaPredicted RBP22.12■■□□□ 1.13
CTSD-204ENST00000433655 HDGFL2Q7Z4V5 671 aaPredicted RBP22.12■■□□□ 1.13
CTSD-204ENST00000433655 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
CTSD-204ENST00000433655 PLEKHF1Q96S99 279 aa22.11■■□□□ 1.13
CTSD-204ENST00000433655 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
CTSD-204ENST00000433655 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
CTSD-204ENST00000433655 CPS1P31327 1500 aa22.08■■□□□ 1.13
CTSD-204ENST00000433655 PDE3AQ14432 1141 aa22.08■■□□□ 1.13
CTSD-204ENST00000433655 TECPR2O15040 1411 aa22.08■■□□□ 1.12
CTSD-204ENST00000433655 TNRQ92752 1358 aa22.07■■□□□ 1.12
CTSD-204ENST00000433655 ANP32AP39687 249 aaKnown RBP22.07■■□□□ 1.12
CTSD-204ENST00000433655 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
CTSD-204ENST00000433655 RARSP54136 660 aaKnown RBP22.07■■□□□ 1.12
CTSD-204ENST00000433655 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
CTSD-204ENST00000433655 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
CTSD-204ENST00000433655 IPO9Q96P70 1041 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms