RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PLEKHG5O94827 1062 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 PMFBP1Q8TBY8 1022 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 DCAF11Q8TEB1 546 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 RWDD1Q9H446 243 aaPredicted RBP4.79□□□□□ -1.64
SHPRH-205ENST00000433355 ZNF326Q5BKZ1 582 aaKnown RBP4.79□□□□□ -1.64
SHPRH-205ENST00000433355 ABCC3O15438 1527 aa4.79□□□□□ -1.64
SHPRH-205ENST00000433355 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
SHPRH-205ENST00000433355 NPATQ14207 1427 aa4.79□□□□□ -1.64
SHPRH-205ENST00000433355 TTC21BQ7Z4L5 1316 aa4.79□□□□□ -1.64
SHPRH-205ENST00000433355 ADGRL3Q9HAR2 1447 aa4.78□□□□□ -1.64
SHPRH-205ENST00000433355 GOLGA2Q08379 1002 aa4.78□□□□□ -1.64
SHPRH-205ENST00000433355 CHIC2Q9UKJ5 165 aa4.78□□□□□ -1.64
SHPRH-205ENST00000433355 IFT172Q9UG01 1749 aa4.78□□□□□ -1.64
SHPRH-205ENST00000433355 EPB41L2O43491 1005 aaKnown RBP4.78□□□□□ -1.64
SHPRH-205ENST00000433355 BABAM1Q9NWV8 329 aa4.78□□□□□ -1.64
SHPRH-205ENST00000433355 WDR63Q8IWG1 891 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 TECPR2O15040 1411 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 STAG3Q9UJ98 1225 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 PLEKHH1Q9ULM0 1364 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 PTPRKQ15262 1439 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 SUPT16HQ9Y5B9 1047 aaKnown RBP4.77□□□□□ -1.65
SHPRH-205ENST00000433355 PPRC1Q5VV67 1664 aaKnown RBP4.77□□□□□ -1.65
SHPRH-205ENST00000433355 DDX19BQ9UMR2 479 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 ABCC6O95255 1503 aa4.77□□□□□ -1.65
SHPRH-205ENST00000433355 ATP6V1DQ9Y5K8 247 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 RCAN3Q9UKA8 241 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 KIF3AQ9Y496 699 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 ZNF692Q9BU19 519 aaPredicted RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 EID1Q9Y6B2 187 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 PIK3C2BO00750 1634 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 CLTCQ00610 1675 aaKnown RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 LRRFIP1Q32MZ4 808 aaKnown RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 SENP3Q9H4L4 574 aaPredicted RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 TMED8Q6PL24 325 aaPredicted RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 ANKARQ7Z5J8 1434 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 RIMS2Q9UQ26 1411 aa4.76□□□□□ -1.65
SHPRH-205ENST00000433355 VIRMAQ69YN4 1812 aaKnown RBP4.76□□□□□ -1.65
SHPRH-205ENST00000433355 GLIPR1L2Q4G1C9 344 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 FTSJ3Q8IY81 847 aaKnown RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 QRICH2Q9H0J4 1663 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 SKOR2Q2VWA4 1001 aaPredicted RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 L1TD1Q5T7N2 865 aaKnown RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 KNDC1Q76NI1 1749 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 HSP90B1P14625 803 aaKnown RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 KIDINS220Q9ULH0 1771 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 CDK12Q9NYV4 1490 aaPredicted RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 RNF123Q5XPI4 1314 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 NOS1P29475 1434 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 ADGRB2O60241 1585 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 MORC1Q86VD1 984 aa4.75□□□□□ -1.65
SHPRH-205ENST00000433355 CIZ1Q9ULV3 898 aaPredicted RBP4.75□□□□□ -1.65
SHPRH-205ENST00000433355 PTCH1Q13635 1447 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 AATKQ6ZMQ8 1374 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 HTATSF1O43719 755 aaKnown RBP4.74□□□□□ -1.65
SHPRH-205ENST00000433355 SPATA31D1Q6ZQQ2 1576 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 SYAP1Q96A49 352 aaPredicted RBP4.74□□□□□ -1.65
SHPRH-205ENST00000433355 TTC21AQ8NDW8 1320 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 REC8O95072 547 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 ALDH1L2Q3SY69 923 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 CCDC34Q96HJ3 373 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 MCCP23508 829 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
SHPRH-205ENST00000433355 POGKQ9P215 609 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 DIP2CQ9Y2E4 1556 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 CAVIN2O95810 425 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 GNAI1P63096 354 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 HSP90AB4PQ58FF6 505 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 API5Q9BZZ5 524 aaKnown RBP4.74□□□□□ -1.65
SHPRH-205ENST00000433355 NRDCO43847 1150 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 RIMS1Q86UR5 1692 aaKnown RBP4.74□□□□□ -1.65
SHPRH-205ENST00000433355 NT5C2P49902 561 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 KIF3BO15066 747 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 MCM2P49736 904 aa4.74□□□□□ -1.65
SHPRH-205ENST00000433355 ST20-MTHFSA0A0A6YYL1 179 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 OVOS2A0A0G2JMS6 1433 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 ARHGEF10O15013 1369 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 PHF14O94880 888 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 FKBP8Q14318 412 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 PKNOX2Q96KN3 472 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 IGSF3O75054 1194 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 RGS12O14924 1447 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 CDC42BPGQ6DT37 1551 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 EDC4Q6P2E9 1401 aaKnown RBP4.73□□□□□ -1.65
SHPRH-205ENST00000433355 IBTKQ9P2D0 1353 aaPredicted RBP4.73□□□□□ -1.65
SHPRH-205ENST00000433355 DDX11L8A8MPP1 907 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 LMTK3Q96Q04 1460 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 PREX1Q8TCU6 1659 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 FCHSD2O94868 740 aa4.73□□□□□ -1.65
SHPRH-205ENST00000433355 RICTORQ6R327 1708 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 RRP1P56182 461 aaKnown RBP4.72□□□□□ -1.65
SHPRH-205ENST00000433355 CSPP1Q1MSJ5 1256 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 C14orf93Q9H972 538 aaKnown RBP4.72□□□□□ -1.65
SHPRH-205ENST00000433355 KIF20BQ96Q89 1820 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 GBP4Q96PP9 640 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 HOXB7P09629 217 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 NCAPD2Q15021 1401 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 GPATCH3Q96I76 525 aa4.72□□□□□ -1.65
SHPRH-205ENST00000433355 SIN3AQ96ST3 1273 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms