RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 DMRT2Q9Y5R5 561 aa36.83■■■■□ 3.49
TMEM248-205ENST00000433271 MINK1Q8N4C8 1332 aaPredicted RBP36.8■■■■□ 3.48
TMEM248-205ENST00000433271 AEBP2Q6ZN18 517 aaPredicted RBP36.8■■■■□ 3.48
TMEM248-205ENST00000433271 NWD1Q149M9 1564 aa36.8■■■■□ 3.48
TMEM248-205ENST00000433271 EVC2Q86UK5 1308 aa36.78■■■■□ 3.48
TMEM248-205ENST00000433271 POLR3GLQ9BT43 218 aa36.76■■■■□ 3.48
TMEM248-205ENST00000433271 DDX10Q13206 875 aaKnown RBP36.74■■■■□ 3.47
TMEM248-205ENST00000433271 TULP4Q9NRJ4 1543 aa36.73■■■■□ 3.47
TMEM248-205ENST00000433271 PUS7Q96PZ0 661 aaKnown RBP36.72■■■■□ 3.47
TMEM248-205ENST00000433271 NKTRP30414 1462 aaKnown RBP36.71■■■■□ 3.47
TMEM248-205ENST00000433271 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.69■■■■□ 3.46
TMEM248-205ENST00000433271 CDK19Q9BWU1 502 aa36.66■■■■□ 3.46
TMEM248-205ENST00000433271 WASLO00401 505 aaPredicted RBP36.65■■■■□ 3.46
TMEM248-205ENST00000433271 ADGRB2O60241 1585 aa36.65■■■■□ 3.46
TMEM248-205ENST00000433271 PROSER2Q86WR7 435 aaPredicted RBP36.64■■■■□ 3.46
TMEM248-205ENST00000433271 STRCP1A6NGW2 1772 aa36.63■■■■□ 3.46
TMEM248-205ENST00000433271 SRPK2P78362 688 aaKnown RBP36.63■■■■□ 3.45
TMEM248-205ENST00000433271 DIEXFQ68CQ4 756 aaKnown RBP36.63■■■■□ 3.45
TMEM248-205ENST00000433271 CABP2Q9NPB3 220 aa36.63■■■■□ 3.45
TMEM248-205ENST00000433271 ZNF335Q9H4Z2 1342 aaPredicted RBP36.59■■■■□ 3.45
TMEM248-205ENST00000433271 RBM33Q96EV2 1170 aaKnown RBP36.57■■■■□ 3.44
TMEM248-205ENST00000433271 ATAD2Q6PL18 1390 aa36.57■■■■□ 3.44
TMEM248-205ENST00000433271 ADGRL3Q9HAR2 1447 aa36.55■■■■□ 3.44
TMEM248-205ENST00000433271 NCOA3Q9Y6Q9 1424 aa36.55■■■■□ 3.44
TMEM248-205ENST00000433271 NALCNQ8IZF0 1738 aa36.52■■■■□ 3.44
TMEM248-205ENST00000433271 TMEM94Q12767 1356 aa36.52■■■■□ 3.44
TMEM248-205ENST00000433271 C14orf37Q86TY3 774 aa36.51■■■■□ 3.43
TMEM248-205ENST00000433271 MYOM1P52179 1685 aa36.5■■■■□ 3.43
TMEM248-205ENST00000433271 NINLQ9Y2I6 1382 aa36.49■■■■□ 3.43
TMEM248-205ENST00000433271 TMC1Q8TDI8 760 aa36.48■■■■□ 3.43
TMEM248-205ENST00000433271 CDC42BPGQ6DT37 1551 aa36.48■■■■□ 3.43
TMEM248-205ENST00000433271 NUDT16Q96DE0 195 aaKnown RBP36.47■■■■□ 3.43
TMEM248-205ENST00000433271 SLC12A5Q9H2X9 1139 aa36.47■■■■□ 3.43
TMEM248-205ENST00000433271 PANK3Q9H999 370 aa36.47■■■■□ 3.43
TMEM248-205ENST00000433271 C19orf44Q9H6X5 657 aa36.46■■■■□ 3.43
TMEM248-205ENST00000433271 LRRC7Q96NW7 1537 aa36.45■■■■□ 3.43
TMEM248-205ENST00000433271 CCDC61Q9Y6R9 512 aa36.45■■■■□ 3.42
TMEM248-205ENST00000433271 PRR36Q9H6K5 1346 aa36.43■■■■□ 3.42
TMEM248-205ENST00000433271 ATP7BP35670 1465 aa36.43■■■■□ 3.42
TMEM248-205ENST00000433271 CABP1Q9NZU7 370 aa36.41■■■■□ 3.42
TMEM248-205ENST00000433271 ANKARQ7Z5J8 1434 aa36.4■■■■□ 3.42
TMEM248-205ENST00000433271 FMN2Q9NZ56 1722 aa36.4■■■■□ 3.42
TMEM248-205ENST00000433271 NUTM2FA1L443 756 aa36.38■■■■□ 3.41
TMEM248-205ENST00000433271 PPIP5K1Q6PFW1 1433 aa36.37■■■■□ 3.41
TMEM248-205ENST00000433271 PER1O15534 1290 aaPredicted RBP36.37■■■■□ 3.41
TMEM248-205ENST00000433271 DCCP43146 1447 aa36.36■■■■□ 3.41
TMEM248-205ENST00000433271 XIRP1Q702N8 1843 aaKnown RBP36.35■■■■□ 3.41
TMEM248-205ENST00000433271 USP32Q8NFA0 1604 aa36.35■■■■□ 3.41
TMEM248-205ENST00000433271 ANKRD36BQ8N2N9 1353 aa36.35■■■■□ 3.41
TMEM248-205ENST00000433271 TERF2IPQ9NYB0 399 aa36.34■■■■□ 3.41
TMEM248-205ENST00000433271 MSH6P52701 1360 aa36.34■■■■□ 3.41
TMEM248-205ENST00000433271 TOPAZ1Q8N9V7 1692 aa36.32■■■■□ 3.4
TMEM248-205ENST00000433271 ATF3P18847 181 aa36.31■■■■□ 3.4
TMEM248-205ENST00000433271 PLEKHG3A1L390 1219 aa36.3■■■■□ 3.4
TMEM248-205ENST00000433271 CARD14Q9BXL6 1004 aa36.3■■■■□ 3.4
TMEM248-205ENST00000433271 CD163L1Q9NR16 1453 aa36.3■■■■□ 3.4
TMEM248-205ENST00000433271 LTBP4Q8N2S1 1624 aa36.3■■■■□ 3.4
TMEM248-205ENST00000433271 CADPS2Q86UW7 1296 aa36.29■■■■□ 3.4
TMEM248-205ENST00000433271 ITSN1Q15811 1721 aa36.28■■■■□ 3.4
TMEM248-205ENST00000433271 HDGFL2Q7Z4V5 671 aaPredicted RBP36.28■■■■□ 3.4
TMEM248-205ENST00000433271 KNSTRNQ9Y448 316 aa36.28■■■■□ 3.4
TMEM248-205ENST00000433271 A0A1W2PP64 1363 aa36.28■■■■□ 3.4
TMEM248-205ENST00000433271 RGPD8O14715 1765 aaPredicted RBP36.26■■■■□ 3.4
TMEM248-205ENST00000433271 CPSF1Q10570 1443 aaKnown RBP36.25■■■■□ 3.39
TMEM248-205ENST00000433271 ANP32CO43423 234 aa36.23■■■■□ 3.39
TMEM248-205ENST00000433271 ZNF692Q9BU19 519 aaPredicted RBP36.23■■■■□ 3.39
TMEM248-205ENST00000433271 NSD3Q9BZ95 1437 aa36.2■■■■□ 3.39
TMEM248-205ENST00000433271 ACEP12821 1306 aa36.2■■■■□ 3.39
TMEM248-205ENST00000433271 C1orf167Q5SNV9 1468 aa36.2■■■■□ 3.39
TMEM248-205ENST00000433271 MST1RQ04912 1400 aa36.2■■■■□ 3.38
TMEM248-205ENST00000433271 ESCO1Q5FWF5 840 aa36.19■■■■□ 3.38
TMEM248-205ENST00000433271 AMER1Q5JTC6 1135 aaPredicted RBP36.19■■■■□ 3.38
TMEM248-205ENST00000433271 PMFBP1Q8TBY8 1022 aa36.19■■■■□ 3.38
TMEM248-205ENST00000433271 POLR3AO14802 1390 aaPredicted RBP36.18■■■■□ 3.38
TMEM248-205ENST00000433271 KTN1Q86UP2 1357 aaKnown RBP36.18■■■■□ 3.38
TMEM248-205ENST00000433271 PHF8Q9UPP1 1060 aa36.18■■■■□ 3.38
TMEM248-205ENST00000433271 MIER1Q8N108 512 aa36.17■■■■□ 3.38
TMEM248-205ENST00000433271 NPC1L1Q9UHC9 1359 aa36.16■■■■□ 3.38
TMEM248-205ENST00000433271 NGDNQ8NEJ9 315 aaKnown RBP36.16■■■■□ 3.38
TMEM248-205ENST00000433271 AKAP12Q02952 1782 aa36.14■■■■□ 3.38
TMEM248-205ENST00000433271 PRKRIP1Q9H875 184 aaPredicted RBP36.14■■■■□ 3.38
TMEM248-205ENST00000433271 ORAI2Q96SN7 254 aa36.13■■■■□ 3.37
TMEM248-205ENST00000433271 CGNL1Q0VF96 1302 aa36.13■■■■□ 3.37
TMEM248-205ENST00000433271 EDC4Q6P2E9 1401 aaKnown RBP36.11■■■■□ 3.37
TMEM248-205ENST00000433271 MON2Q7Z3U7 1717 aa36.11■■■■□ 3.37
TMEM248-205ENST00000433271 CC2D1BQ5T0F9 858 aaKnown RBP36.09■■■■□ 3.37
TMEM248-205ENST00000433271 USP6P35125 1406 aa36.09■■■■□ 3.37
TMEM248-205ENST00000433271 CNGB1Q14028 1251 aaPredicted RBP36.08■■■■□ 3.37
TMEM248-205ENST00000433271 SLAIN2Q9P270 581 aa36.08■■■■□ 3.37
TMEM248-205ENST00000433271 RALBP1Q15311 655 aa36.05■■■■□ 3.36
TMEM248-205ENST00000433271 KIF1AQ12756 1690 aa36.04■■■■□ 3.36
TMEM248-205ENST00000433271 NSD2O96028 1365 aa36.04■■■■□ 3.36
TMEM248-205ENST00000433271 PARD3Q8TEW0 1356 aa36.04■■■■□ 3.36
TMEM248-205ENST00000433271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.03■■■■□ 3.36
TMEM248-205ENST00000433271 SSH2Q76I76 1423 aa36.03■■■■□ 3.36
TMEM248-205ENST00000433271 FYB1O15117 783 aa36.01■■■■□ 3.36
TMEM248-205ENST00000433271 TTC21BQ7Z4L5 1316 aa36.01■■■■□ 3.35
TMEM248-205ENST00000433271 BRD4O60885 1362 aaPredicted RBP36■■■■□ 3.35
TMEM248-205ENST00000433271 FOXO3O43524 673 aa36■■■■□ 3.35
TMEM248-205ENST00000433271 PSME1Q06323 249 aa36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms