RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
TTR-202ENST00000432547 SPSB2Q99619 263 aa11.88□□□□□ -0.51
TTR-202ENST00000432547 MORN1Q5T089 497 aa11.87□□□□□ -0.51
TTR-202ENST00000432547 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
TTR-202ENST00000432547 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
TTR-202ENST00000432547 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
TTR-202ENST00000432547 FUT2Q10981 343 aa11.85□□□□□ -0.51
TTR-202ENST00000432547 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
TTR-202ENST00000432547 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
TTR-202ENST00000432547 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
TTR-202ENST00000432547 RDH13Q8NBN7 331 aa11.83□□□□□ -0.52
TTR-202ENST00000432547 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
TTR-202ENST00000432547 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
TTR-202ENST00000432547 SLC27A5Q9Y2P5 690 aa11.81□□□□□ -0.52
TTR-202ENST00000432547 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
TTR-202ENST00000432547 GCGRP47871 477 aa11.8□□□□□ -0.52
TTR-202ENST00000432547 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
TTR-202ENST00000432547 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
TTR-202ENST00000432547 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
TTR-202ENST00000432547 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
TTR-202ENST00000432547 FCF1Q9Y324 198 aaKnown RBP11.79□□□□□ -0.52
TTR-202ENST00000432547 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
TTR-202ENST00000432547 FOXC1Q12948 553 aa11.77□□□□□ -0.53
TTR-202ENST00000432547 RPIAP49247 311 aa11.76□□□□□ -0.53
TTR-202ENST00000432547 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
TTR-202ENST00000432547 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
TTR-202ENST00000432547 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
TTR-202ENST00000432547 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
TTR-202ENST00000432547 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
TTR-202ENST00000432547 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
TTR-202ENST00000432547 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
TTR-202ENST00000432547 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
TTR-202ENST00000432547 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
TTR-202ENST00000432547 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
TTR-202ENST00000432547 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
TTR-202ENST00000432547 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
TTR-202ENST00000432547 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
TTR-202ENST00000432547 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
TTR-202ENST00000432547 GPIHBP1Q8IV16 184 aa11.7□□□□□ -0.54
TTR-202ENST00000432547 AVPP01185 164 aa11.69□□□□□ -0.54
TTR-202ENST00000432547 MSS51Q4VC12 460 aa11.69□□□□□ -0.54
TTR-202ENST00000432547 LCE2AQ5TA79 106 aaPredicted RBP11.69□□□□□ -0.54
TTR-202ENST00000432547 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
TTR-202ENST00000432547 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
TTR-202ENST00000432547 ZNF608Q9ULD9 1512 aaPredicted RBP11.69□□□□□ -0.54
TTR-202ENST00000432547 CHD1O14646 1710 aa11.68□□□□□ -0.54
TTR-202ENST00000432547 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
TTR-202ENST00000432547 CD46P15529 392 aa11.66□□□□□ -0.54
TTR-202ENST00000432547 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
TTR-202ENST00000432547 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
TTR-202ENST00000432547 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
TTR-202ENST00000432547 MMP16P51512 607 aa11.63□□□□□ -0.55
TTR-202ENST00000432547 CYP4X1Q8N118 509 aa11.63□□□□□ -0.55
TTR-202ENST00000432547 HLA-CQ95604 372 aa11.63□□□□□ -0.55
TTR-202ENST00000432547 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
TTR-202ENST00000432547 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
TTR-202ENST00000432547 GMPR2Q9P2T1 348 aaKnown RBP11.61□□□□□ -0.55
TTR-202ENST00000432547 MAP2K5Q13163 448 aa11.6□□□□□ -0.55
TTR-202ENST00000432547 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
TTR-202ENST00000432547 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
TTR-202ENST00000432547 TRIM32Q13049 653 aa11.59□□□□□ -0.55
TTR-202ENST00000432547 WNT7AO00755 349 aa11.58□□□□□ -0.56
TTR-202ENST00000432547 IRF6O14896 467 aa11.58□□□□□ -0.56
TTR-202ENST00000432547 AXIN1O15169 862 aa11.58□□□□□ -0.56
TTR-202ENST00000432547 SMPD1P17405 629 aa11.58□□□□□ -0.56
TTR-202ENST00000432547 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
TTR-202ENST00000432547 KDM4AO75164 1064 aa11.57□□□□□ -0.56
TTR-202ENST00000432547 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
TTR-202ENST00000432547 Q3C1V9 767 aa11.57□□□□□ -0.56
TTR-202ENST00000432547 CUX1P39880 1505 aa11.56□□□□□ -0.56
TTR-202ENST00000432547 ZBTB24O43167 697 aaPredicted RBP11.56□□□□□ -0.56
TTR-202ENST00000432547 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
TTR-202ENST00000432547 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
TTR-202ENST00000432547 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
TTR-202ENST00000432547 USB1Q9BQ65 265 aaKnown RBP11.56□□□□□ -0.56
TTR-202ENST00000432547 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
TTR-202ENST00000432547 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
TTR-202ENST00000432547 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
TTR-202ENST00000432547 MRGPRX2Q96LB1 330 aa11.55□□□□□ -0.56
TTR-202ENST00000432547 FGD5Q6ZNL6 1462 aa11.55□□□□□ -0.56
TTR-202ENST00000432547 TTC24A2A3L6 582 aaPredicted RBP11.54□□□□□ -0.56
TTR-202ENST00000432547 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
TTR-202ENST00000432547 J3QL48 77 aa11.53□□□□□ -0.56
TTR-202ENST00000432547 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
TTR-202ENST00000432547 SNIP1Q8TAD8 396 aaKnown RBP11.53□□□□□ -0.56
TTR-202ENST00000432547 HOXA2O43364 376 aa11.52□□□□□ -0.57
TTR-202ENST00000432547 SKOR1P84550 965 aa11.52□□□□□ -0.57
TTR-202ENST00000432547 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
TTR-202ENST00000432547 SOGA1O94964 1423 aa11.51□□□□□ -0.57
TTR-202ENST00000432547 CCDC102AQ96A19 550 aa11.5□□□□□ -0.57
TTR-202ENST00000432547 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
TTR-202ENST00000432547 USP46P62068 366 aa11.49□□□□□ -0.57
TTR-202ENST00000432547 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
TTR-202ENST00000432547 SYMPKQ92797 1274 aaKnown RBP11.49□□□□□ -0.57
TTR-202ENST00000432547 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
TTR-202ENST00000432547 HPS1Q92902 700 aa11.48□□□□□ -0.57
TTR-202ENST00000432547 ATP13A2Q9NQ11 1180 aa11.48□□□□□ -0.57
TTR-202ENST00000432547 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
TTR-202ENST00000432547 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
TTR-202ENST00000432547 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms