RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CABP2Q9NPB3 220 aa26.25■■□□□ 1.79
VRK2-205ENST00000432057 MINK1Q8N4C8 1332 aaPredicted RBP26.25■■□□□ 1.79
VRK2-205ENST00000432057 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.24■■□□□ 1.79
VRK2-205ENST00000432057 POGKQ9P215 609 aa26.24■■□□□ 1.79
VRK2-205ENST00000432057 NUDCQ9Y266 331 aa26.22■■□□□ 1.79
VRK2-205ENST00000432057 ANKRD36BQ8N2N9 1353 aa26.21■■□□□ 1.79
VRK2-205ENST00000432057 NLRP1Q9C000 1473 aa26.21■■□□□ 1.79
VRK2-205ENST00000432057 TMEM2Q9UHN6 1383 aa26.2■■□□□ 1.78
VRK2-205ENST00000432057 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
VRK2-205ENST00000432057 SRPK2P78362 688 aaKnown RBP26.19■■□□□ 1.78
VRK2-205ENST00000432057 IRX6P78412 446 aaPredicted RBP26.19■■□□□ 1.78
VRK2-205ENST00000432057 METP08581 1390 aa26.17■■□□□ 1.78
VRK2-205ENST00000432057 NINLQ9Y2I6 1382 aa26.17■■□□□ 1.78
VRK2-205ENST00000432057 ANKRD26Q9UPS8 1709 aa26.17■■□□□ 1.78
VRK2-205ENST00000432057 ATAD2Q6PL18 1390 aa26.16■■□□□ 1.78
VRK2-205ENST00000432057 PLEKHH1Q9ULM0 1364 aa26.16■■□□□ 1.78
VRK2-205ENST00000432057 ADAMTS8Q9UP79 889 aa26.16■■□□□ 1.78
VRK2-205ENST00000432057 SALL2Q9Y467 1007 aaPredicted RBP26.16■■□□□ 1.78
VRK2-205ENST00000432057 WDR43Q15061 677 aaKnown RBP eCLIP26.15■■□□□ 1.78
VRK2-205ENST00000432057 ABCC11Q96J66 1382 aa26.15■■□□□ 1.78
VRK2-205ENST00000432057 SHPRHQ149N8 1683 aa26.14■■□□□ 1.78
VRK2-205ENST00000432057 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
VRK2-205ENST00000432057 CPS1P31327 1500 aa26.14■■□□□ 1.78
VRK2-205ENST00000432057 HDGFP51858 240 aaKnown RBP26.14■■□□□ 1.78
VRK2-205ENST00000432057 CGNL1Q0VF96 1302 aa26.13■■□□□ 1.77
VRK2-205ENST00000432057 KIF20BQ96Q89 1820 aa26.12■■□□□ 1.77
VRK2-205ENST00000432057 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
VRK2-205ENST00000432057 MORC1Q86VD1 984 aa26.12■■□□□ 1.77
VRK2-205ENST00000432057 CD163L1Q9NR16 1453 aa26.12■■□□□ 1.77
VRK2-205ENST00000432057 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
VRK2-205ENST00000432057 RIMS1Q86UR5 1692 aaKnown RBP26.1■■□□□ 1.77
VRK2-205ENST00000432057 CDK19Q9BWU1 502 aa26.1■■□□□ 1.77
VRK2-205ENST00000432057 NSD2O96028 1365 aa26.09■■□□□ 1.77
VRK2-205ENST00000432057 TECPR2O15040 1411 aa26.09■■□□□ 1.77
VRK2-205ENST00000432057 ADAMTS13Q76LX8 1427 aa26.08■■□□□ 1.77
VRK2-205ENST00000432057 SLIT1O75093 1534 aa26.07■■□□□ 1.76
VRK2-205ENST00000432057 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
VRK2-205ENST00000432057 PLEKHG1Q9ULL1 1385 aa26.06■■□□□ 1.76
VRK2-205ENST00000432057 TNNT2P45379 298 aaPredicted RBP26.06■■□□□ 1.76
VRK2-205ENST00000432057 ARHGAP23Q9P227 1491 aa26.05■■□□□ 1.76
VRK2-205ENST00000432057 LTKP29376 864 aa26.04■■□□□ 1.76
VRK2-205ENST00000432057 PDE3BQ13370 1112 aa26.04■■□□□ 1.76
VRK2-205ENST00000432057 FAM135BQ49AJ0 1406 aa26.04■■□□□ 1.76
VRK2-205ENST00000432057 TXNDC2Q86VQ3 553 aa26.03■■□□□ 1.76
VRK2-205ENST00000432057 TERF2IPQ9NYB0 399 aa26.02■■□□□ 1.76
VRK2-205ENST00000432057 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
VRK2-205ENST00000432057 RNF123Q5XPI4 1314 aa26■■□□□ 1.75
VRK2-205ENST00000432057 CDCA7LQ96GN5 454 aa26■■□□□ 1.75
VRK2-205ENST00000432057 MED14O60244 1454 aa26■■□□□ 1.75
VRK2-205ENST00000432057 ATP7BP35670 1465 aa26■■□□□ 1.75
VRK2-205ENST00000432057 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.99■■□□□ 1.75
VRK2-205ENST00000432057 ERICH6BQ5W0A0 696 aa25.99■■□□□ 1.75
VRK2-205ENST00000432057 ITSN1Q15811 1721 aa25.98■■□□□ 1.75
VRK2-205ENST00000432057 CCDC146Q8IYE0 955 aa25.98■■□□□ 1.75
VRK2-205ENST00000432057 CABP1Q9NZU7 370 aa25.98■■□□□ 1.75
VRK2-205ENST00000432057 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
VRK2-205ENST00000432057 HDGFL2Q7Z4V5 671 aaPredicted RBP25.98■■□□□ 1.75
VRK2-205ENST00000432057 SIRT1Q96EB6 747 aa25.97■■□□□ 1.75
VRK2-205ENST00000432057 AKAP12Q02952 1782 aa25.97■■□□□ 1.75
VRK2-205ENST00000432057 ADGRB2O60241 1585 aa25.97■■□□□ 1.75
VRK2-205ENST00000432057 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
VRK2-205ENST00000432057 MON2Q7Z3U7 1717 aa25.96■■□□□ 1.75
VRK2-205ENST00000432057 ROBO2Q9HCK4 1378 aa25.96■■□□□ 1.75
VRK2-205ENST00000432057 WASLO00401 505 aaPredicted RBP25.96■■□□□ 1.75
VRK2-205ENST00000432057 ADAMTSL3P82987 1691 aa25.95■■□□□ 1.75
VRK2-205ENST00000432057 GGNBP2Q9H3C7 697 aa25.95■■□□□ 1.74
VRK2-205ENST00000432057 MTHFSP49914 203 aa25.94■■□□□ 1.74
VRK2-205ENST00000432057 DIP2AQ14689 1571 aa25.93■■□□□ 1.74
VRK2-205ENST00000432057 PPIP5K1Q6PFW1 1433 aa25.93■■□□□ 1.74
VRK2-205ENST00000432057 PTPRUQ92729 1446 aa25.93■■□□□ 1.74
VRK2-205ENST00000432057 CDC42BPGQ6DT37 1551 aa25.93■■□□□ 1.74
VRK2-205ENST00000432057 ZNF142P52746 1687 aaPredicted RBP25.92■■□□□ 1.74
VRK2-205ENST00000432057 TOPAZ1Q8N9V7 1692 aa25.92■■□□□ 1.74
VRK2-205ENST00000432057 FYB1O15117 783 aa25.91■■□□□ 1.74
VRK2-205ENST00000432057 SLC26A8Q96RN1 970 aa25.91■■□□□ 1.74
VRK2-205ENST00000432057 ZNF521Q96K83 1311 aa25.91■■□□□ 1.74
VRK2-205ENST00000432057 THEMISQ8N1K5 641 aaPredicted RBP25.9■■□□□ 1.74
VRK2-205ENST00000432057 PPP4R2Q9NY27 417 aa25.9■■□□□ 1.74
VRK2-205ENST00000432057 CFAP53Q96M91 514 aa25.89■■□□□ 1.73
VRK2-205ENST00000432057 RCAN3Q9UKA8 241 aa25.89■■□□□ 1.73
VRK2-205ENST00000432057 APAF1O14727 1248 aa25.88■■□□□ 1.73
VRK2-205ENST00000432057 CPSF1Q10570 1443 aaKnown RBP25.88■■□□□ 1.73
VRK2-205ENST00000432057 XRN1Q8IZH2 1706 aaKnown RBP25.87■■□□□ 1.73
VRK2-205ENST00000432057 COL3A1P02461 1466 aaPredicted RBP25.86■■□□□ 1.73
VRK2-205ENST00000432057 NUDT16Q96DE0 195 aaKnown RBP25.86■■□□□ 1.73
VRK2-205ENST00000432057 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
VRK2-205ENST00000432057 MAP2P11137 1827 aaKnown RBP25.85■■□□□ 1.73
VRK2-205ENST00000432057 RRP1P56182 461 aaKnown RBP25.84■■□□□ 1.73
VRK2-205ENST00000432057 EDC4Q6P2E9 1401 aaKnown RBP25.84■■□□□ 1.73
VRK2-205ENST00000432057 NCKAP5LQ9HCH0 1330 aa25.83■■□□□ 1.73
VRK2-205ENST00000432057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.73
VRK2-205ENST00000432057 PRR36Q9H6K5 1346 aa25.83■■□□□ 1.72
VRK2-205ENST00000432057 GOLGA2Q08379 1002 aa25.82■■□□□ 1.72
VRK2-205ENST00000432057 TBX22Q9Y458 520 aa25.82■■□□□ 1.72
VRK2-205ENST00000432057 PTCH1Q13635 1447 aa25.82■■□□□ 1.72
VRK2-205ENST00000432057 NRKQ7Z2Y5 1582 aa25.81■■□□□ 1.72
VRK2-205ENST00000432057 RGPD8O14715 1765 aaPredicted RBP25.8■■□□□ 1.72
VRK2-205ENST00000432057 DUSP27Q5VZP5 1158 aa25.79■■□□□ 1.72
VRK2-205ENST00000432057 AMOTL2Q9Y2J4 779 aa25.79■■□□□ 1.72
VRK2-205ENST00000432057 CCDC61Q9Y6R9 512 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms