RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
NEDD4L-206ENST00000431212 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
NEDD4L-206ENST00000431212 GRPEL1Q9HAV7 217 aa13.03□□□□□ -0.32
NEDD4L-206ENST00000431212 ISY1Q9ULR0 285 aaKnown RBP13.03□□□□□ -0.32
NEDD4L-206ENST00000431212 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
NEDD4L-206ENST00000431212 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
NEDD4L-206ENST00000431212 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.32
NEDD4L-206ENST00000431212 MORC1Q86VD1 984 aa13.02□□□□□ -0.33
NEDD4L-206ENST00000431212 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-206ENST00000431212 SPHKAPQ2M3C7 1700 aa13.01□□□□□ -0.33
NEDD4L-206ENST00000431212 ESPNB1AK53 854 aa13.01□□□□□ -0.33
NEDD4L-206ENST00000431212 PKNOX2Q96KN3 472 aa13.01□□□□□ -0.33
NEDD4L-206ENST00000431212 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-206ENST00000431212 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
NEDD4L-206ENST00000431212 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
NEDD4L-206ENST00000431212 ERVK-7P63135 1459 aa13□□□□□ -0.33
NEDD4L-206ENST00000431212 DZIP1LQ8IYY4 767 aaKnown RBP13□□□□□ -0.33
NEDD4L-206ENST00000431212 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
NEDD4L-206ENST00000431212 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
NEDD4L-206ENST00000431212 TRPM2O94759 1503 aa12.99□□□□□ -0.33
NEDD4L-206ENST00000431212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEDD4L-206ENST00000431212 CEP152O94986 1710 aa12.99□□□□□ -0.33
NEDD4L-206ENST00000431212 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
NEDD4L-206ENST00000431212 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
NEDD4L-206ENST00000431212 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
NEDD4L-206ENST00000431212 CFAP53Q96M91 514 aa12.97□□□□□ -0.33
NEDD4L-206ENST00000431212 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-206ENST00000431212 PTPRTO14522 1441 aa12.97□□□□□ -0.33
NEDD4L-206ENST00000431212 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
NEDD4L-206ENST00000431212 KANK1Q14678 1352 aa12.96□□□□□ -0.33
NEDD4L-206ENST00000431212 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.33
NEDD4L-206ENST00000431212 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.33
NEDD4L-206ENST00000431212 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
NEDD4L-206ENST00000431212 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 EFCAB2Q5VUJ9 269 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 ZMYND15Q9H091 742 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 DDX19BQ9UMR2 479 aa12.95□□□□□ -0.34
NEDD4L-206ENST00000431212 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 PTMSP20962 102 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 MTHFSP49914 203 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 SNX21Q969T3 373 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
NEDD4L-206ENST00000431212 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
NEDD4L-206ENST00000431212 DDIT3P35638 169 aa12.93□□□□□ -0.34
NEDD4L-206ENST00000431212 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
NEDD4L-206ENST00000431212 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
NEDD4L-206ENST00000431212 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
NEDD4L-206ENST00000431212 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-206ENST00000431212 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
NEDD4L-206ENST00000431212 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-206ENST00000431212 TRIM27P14373 513 aa12.92□□□□□ -0.34
NEDD4L-206ENST00000431212 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.345e-7■■■■□ 23
NEDD4L-206ENST00000431212 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
NEDD4L-206ENST00000431212 TPM2P07951 284 aa12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 PLCH2O75038 1416 aa12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 TSR2Q969E8 191 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-206ENST00000431212 TRAPPC8Q9Y2L5 1435 aa12.9□□□□□ -0.34
NEDD4L-206ENST00000431212 ATF7IPQ6VMQ6 1270 aa12.9□□□□□ -0.34
NEDD4L-206ENST00000431212 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
NEDD4L-206ENST00000431212 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.35
NEDD4L-206ENST00000431212 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.35
NEDD4L-206ENST00000431212 MAP3K4Q9Y6R4 1608 aa12.89□□□□□ -0.35
NEDD4L-206ENST00000431212 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
NEDD4L-206ENST00000431212 MYOM2P54296 1465 aa12.89□□□□□ -0.35
NEDD4L-206ENST00000431212 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 SHROOM2Q13796 1616 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 NUCB1Q02818 461 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
NEDD4L-206ENST00000431212 AFAP1Q8N556 730 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 TET3O43151 1660 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 ABCC1P33527 1531 aa12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
NEDD4L-206ENST00000431212 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
NEDD4L-206ENST00000431212 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
NEDD4L-206ENST00000431212 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
NEDD4L-206ENST00000431212 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
NEDD4L-206ENST00000431212 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
NEDD4L-206ENST00000431212 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
NEDD4L-206ENST00000431212 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
NEDD4L-206ENST00000431212 ZSCAN30Q86W11 494 aa12.85□□□□□ -0.35
NEDD4L-206ENST00000431212 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms