RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 FOXD1Q16676 465 aa33.5■■■□□ 2.95
PTPRA-207ENST00000431048 NPHP3Q7Z494 1330 aa33.49■■■□□ 2.95
PTPRA-207ENST00000431048 PPARGC1BQ86YN6 1023 aaKnown RBP33.47■■■□□ 2.95
PTPRA-207ENST00000431048 MYOM2P54296 1465 aa33.47■■■□□ 2.95
PTPRA-207ENST00000431048 CCDC125Q86Z20 511 aa33.45■■■□□ 2.95
PTPRA-207ENST00000431048 ESCO1Q5FWF5 840 aa33.44■■■□□ 2.94
PTPRA-207ENST00000431048 ZRANB1Q9UGI0 708 aa33.42■■■□□ 2.94
PTPRA-207ENST00000431048 RRBP1Q9P2E9 1410 aaKnown RBP33.42■■■□□ 2.94
PTPRA-207ENST00000431048 BCL9LQ86UU0 1499 aa33.42■■■□□ 2.94
PTPRA-207ENST00000431048 CDC42BPGQ6DT37 1551 aa33.4■■■□□ 2.94
PTPRA-207ENST00000431048 PXDNQ92626 1479 aa33.4■■■□□ 2.94
PTPRA-207ENST00000431048 LRPPRCP42704 1394 aaKnown RBP33.37■■■□□ 2.93
PTPRA-207ENST00000431048 FOXO3O43524 673 aa33.37■■■□□ 2.93
PTPRA-207ENST00000431048 GJD4Q96KN9 370 aaPredicted RBP33.37■■■□□ 2.93
PTPRA-207ENST00000431048 SLC4A1APQ9BWU0 796 aaKnown RBP33.37■■■□□ 2.93
PTPRA-207ENST00000431048 PPLO60437 1756 aa33.37■■■□□ 2.93
PTPRA-207ENST00000431048 EP400Q96L91 3159 aa33.36■■■□□ 2.93
PTPRA-207ENST00000431048 TECPR2O15040 1411 aa33.31■■■□□ 2.92
PTPRA-207ENST00000431048 MARF1Q9Y4F3 1742 aaKnown RBP33.3■■■□□ 2.92
PTPRA-207ENST00000431048 XPCQ01831 940 aaPredicted RBP33.29■■■□□ 2.92
PTPRA-207ENST00000431048 ADGRF5Q8IZF2 1346 aa33.28■■■□□ 2.92
PTPRA-207ENST00000431048 ABCC11Q96J66 1382 aa33.27■■■□□ 2.92
PTPRA-207ENST00000431048 WAPLQ7Z5K2 1190 aa33.27■■■□□ 2.92
PTPRA-207ENST00000431048 UNC5CLQ8IV45 518 aa33.27■■■□□ 2.92
PTPRA-207ENST00000431048 SPATA31A3Q5VYP0 1347 aa33.25■■■□□ 2.91
PTPRA-207ENST00000431048 STK26Q9P289 416 aa33.24■■■□□ 2.91
PTPRA-207ENST00000431048 SLIT2O94813 1529 aa33.23■■■□□ 2.91
PTPRA-207ENST00000431048 ANKRD30BQ9BXX2 1392 aa33.22■■■□□ 2.91
PTPRA-207ENST00000431048 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.22■■■□□ 2.91
PTPRA-207ENST00000431048 NUTM2FA1L443 756 aa33.21■■■□□ 2.91
PTPRA-207ENST00000431048 RALGAPBQ86X10 1494 aa33.19■■■□□ 2.9
PTPRA-207ENST00000431048 SIRT1Q96EB6 747 aa33.19■■■□□ 2.9
PTPRA-207ENST00000431048 SPATA31E1Q6ZUB1 1445 aa33.19■■■□□ 2.9
PTPRA-207ENST00000431048 CCDC144AA2RUR9 1427 aa33.18■■■□□ 2.9
PTPRA-207ENST00000431048 BLMP54132 1417 aaPredicted RBP33.18■■■□□ 2.9
PTPRA-207ENST00000431048 RGL3Q3MIN7 710 aa33.17■■■□□ 2.9
PTPRA-207ENST00000431048 KRT28Q7Z3Y7 464 aa33.17■■■□□ 2.9
PTPRA-207ENST00000431048 PLEKHH1Q9ULM0 1364 aa33.17■■■□□ 2.9
PTPRA-207ENST00000431048 TMEM132EQ6IEE7 984 aa33.16■■■□□ 2.9
PTPRA-207ENST00000431048 GLI3P10071 1580 aa33.16■■■□□ 2.9
PTPRA-207ENST00000431048 KNDC1Q76NI1 1749 aa33.14■■■□□ 2.89
PTPRA-207ENST00000431048 KIF1AQ12756 1690 aa33.13■■■□□ 2.89
PTPRA-207ENST00000431048 FMN2Q9NZ56 1722 aa33.12■■■□□ 2.89
PTPRA-207ENST00000431048 PIK3C2GO75747 1445 aa33.11■■■□□ 2.89
PTPRA-207ENST00000431048 ONECUT3O60422 494 aaPredicted RBP33.11■■■□□ 2.89
PTPRA-207ENST00000431048 YTHDC2Q9H6S0 1430 aaKnown RBP33.11■■■□□ 2.89
PTPRA-207ENST00000431048 PSME1Q06323 249 aa33.1■■■□□ 2.89
PTPRA-207ENST00000431048 VPS72Q15906 364 aa33.1■■■□□ 2.89
PTPRA-207ENST00000431048 USP32Q8NFA0 1604 aa33.09■■■□□ 2.89
PTPRA-207ENST00000431048 SEPT12Q8IYM1 358 aa33.08■■■□□ 2.89
PTPRA-207ENST00000431048 IFT172Q9UG01 1749 aa33.08■■■□□ 2.89
PTPRA-207ENST00000431048 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
PTPRA-207ENST00000431048 TNS3Q68CZ2 1445 aa33.06■■■□□ 2.88
PTPRA-207ENST00000431048 MPHOSPH9Q99550 1183 aa33.05■■■□□ 2.88
PTPRA-207ENST00000431048 C14orf93Q9H972 538 aaKnown RBP33.05■■■□□ 2.88
PTPRA-207ENST00000431048 SF3B2Q13435 895 aaKnown RBP33.04■■■□□ 2.88
PTPRA-207ENST00000431048 DEFB132Q7Z7B7 95 aa33.04■■■□□ 2.88
PTPRA-207ENST00000431048 SBNO1A3KN83 1393 aa33.04■■■□□ 2.88
PTPRA-207ENST00000431048 HAP1P54257 671 aaPredicted RBP33.03■■■□□ 2.88
PTPRA-207ENST00000431048 BRWD3Q6RI45 1802 aa33.02■■■□□ 2.88
PTPRA-207ENST00000431048 CABLES1Q8TDN4 633 aa33■■■□□ 2.87
PTPRA-207ENST00000431048 ARHGEF10O15013 1369 aa32.98■■■□□ 2.87
PTPRA-207ENST00000431048 KRT27Q7Z3Y8 459 aa32.98■■■□□ 2.87
PTPRA-207ENST00000431048 NRXN1Q9ULB1 1477 aa32.98■■■□□ 2.87
PTPRA-207ENST00000431048 DHX57Q6P158 1386 aaKnown RBP32.97■■■□□ 2.87
PTPRA-207ENST00000431048 NWD2Q9ULI1 1742 aa32.97■■■□□ 2.87
PTPRA-207ENST00000431048 FAM83GA6ND36 823 aa32.94■■■□□ 2.86
PTPRA-207ENST00000431048 CCDC9Q9Y3X0 531 aaKnown RBP32.94■■■□□ 2.86
PTPRA-207ENST00000431048 RGPD8O14715 1765 aaPredicted RBP32.93■■■□□ 2.86
PTPRA-207ENST00000431048 CFAP70Q5T0N1 1121 aa32.92■■■□□ 2.86
PTPRA-207ENST00000431048 LMOD2Q6P5Q4 547 aa32.91■■■□□ 2.86
PTPRA-207ENST00000431048 PLCH1Q4KWH8 1693 aa32.91■■■□□ 2.86
PTPRA-207ENST00000431048 PRAM1Q96QH2 718 aa32.9■■■□□ 2.86
PTPRA-207ENST00000431048 ANKARQ7Z5J8 1434 aa32.89■■■□□ 2.86
PTPRA-207ENST00000431048 ACIN1Q9UKV3 1341 aaKnown RBP32.89■■■□□ 2.86
PTPRA-207ENST00000431048 BAG6P46379 1132 aa32.86■■■□□ 2.85
PTPRA-207ENST00000431048 LRP5O75197 1615 aa32.86■■■□□ 2.85
PTPRA-207ENST00000431048 ABCA3Q99758 1704 aa32.85■■■□□ 2.85
PTPRA-207ENST00000431048 PLEKHG5O94827 1062 aa32.85■■■□□ 2.85
PTPRA-207ENST00000431048 DLC1Q96QB1 1528 aa32.84■■■□□ 2.85
PTPRA-207ENST00000431048 SAFB2Q14151 953 aaKnown RBP eCLIP32.84■■■□□ 2.85
PTPRA-207ENST00000431048 PMFBP1Q8TBY8 1022 aa32.84■■■□□ 2.85
PTPRA-207ENST00000431048 POGKQ9P215 609 aa32.83■■■□□ 2.85
PTPRA-207ENST00000431048 FAM98CQ17RN3 349 aaKnown RBP32.81■■■□□ 2.84
PTPRA-207ENST00000431048 BTG4Q9NY30 223 aa32.81■■■□□ 2.84
PTPRA-207ENST00000431048 A0A0G2JS52 829 aa32.78■■■□□ 2.84
PTPRA-207ENST00000431048 MYT1Q01538 1121 aa32.78■■■□□ 2.84
PTPRA-207ENST00000431048 HRCP23327 699 aa32.77■■■□□ 2.84
PTPRA-207ENST00000431048 GPRASP1Q5JY77 1395 aa32.77■■■□□ 2.84
PTPRA-207ENST00000431048 ADGRB2O60241 1585 aa32.77■■■□□ 2.84
PTPRA-207ENST00000431048 NRAPQ86VF7 1730 aa32.77■■■□□ 2.84
PTPRA-207ENST00000431048 TRPM3Q9HCF6 1732 aaPredicted RBP32.74■■■□□ 2.83
PTPRA-207ENST00000431048 EIF3AQ14152 1382 aaKnown RBP32.74■■■□□ 2.83
PTPRA-207ENST00000431048 PSDA5PKW4 1024 aaPredicted RBP32.74■■■□□ 2.83
PTPRA-207ENST00000431048 SPATA31A5Q5VU36 1347 aa32.74■■■□□ 2.83
PTPRA-207ENST00000431048 SPATA31A7Q8IWB4 1347 aa32.74■■■□□ 2.83
PTPRA-207ENST00000431048 COL14A1Q05707 1796 aaKnown RBP32.73■■■□□ 2.83
PTPRA-207ENST00000431048 ALS2Q96Q42 1657 aa32.71■■■□□ 2.83
PTPRA-207ENST00000431048 EN1Q05925 392 aaPredicted RBP32.7■■■□□ 2.83
PTPRA-207ENST00000431048 PRR36Q9H6K5 1346 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms