RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 GPRASP1Q5JY77 1395 aa28.67■■■□□ 2.18
CSNK1E-207ENST00000430335 NALCNQ8IZF0 1738 aa28.67■■■□□ 2.18
CSNK1E-207ENST00000430335 RALGAPBQ86X10 1494 aa28.66■■■□□ 2.18
CSNK1E-207ENST00000430335 ILDR1Q86SU0 546 aaPredicted RBP28.66■■■□□ 2.18
CSNK1E-207ENST00000430335 POGKQ9P215 609 aa28.66■■■□□ 2.18
CSNK1E-207ENST00000430335 PIP4K2BP78356 416 aa28.64■■■□□ 2.18
CSNK1E-207ENST00000430335 SLAIN2Q9P270 581 aa28.64■■■□□ 2.18
CSNK1E-207ENST00000430335 ARHGEF28Q8N1W1 1705 aaKnown RBP28.61■■■□□ 2.17
CSNK1E-207ENST00000430335 CDC42BPGQ6DT37 1551 aa28.61■■■□□ 2.17
CSNK1E-207ENST00000430335 SAFB2Q14151 953 aaKnown RBP eCLIP28.59■■■□□ 2.17
CSNK1E-207ENST00000430335 SCAF1Q9H7N4 1312 aaKnown RBP28.59■■■□□ 2.17
CSNK1E-207ENST00000430335 MST1RQ04912 1400 aa28.59■■■□□ 2.17
CSNK1E-207ENST00000430335 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
CSNK1E-207ENST00000430335 ADGRB2O60241 1585 aa28.54■■■□□ 2.16
CSNK1E-207ENST00000430335 CENPJQ9HC77 1338 aaPredicted RBP28.53■■■□□ 2.16
CSNK1E-207ENST00000430335 C1orf167Q5SNV9 1468 aa28.53■■■□□ 2.16
CSNK1E-207ENST00000430335 EIF3AQ14152 1382 aaKnown RBP28.52■■■□□ 2.16
CSNK1E-207ENST00000430335 MINK1Q8N4C8 1332 aaPredicted RBP28.52■■■□□ 2.16
CSNK1E-207ENST00000430335 ROBO1Q9Y6N7 1651 aa28.5■■■□□ 2.15
CSNK1E-207ENST00000430335 BRINP3Q76B58 766 aa28.49■■■□□ 2.15
CSNK1E-207ENST00000430335 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
CSNK1E-207ENST00000430335 WASLO00401 505 aaPredicted RBP28.47■■■□□ 2.15
CSNK1E-207ENST00000430335 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
CSNK1E-207ENST00000430335 HSPA1LP34931 641 aa28.44■■■□□ 2.14
CSNK1E-207ENST00000430335 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
CSNK1E-207ENST00000430335 ORAI2Q96SN7 254 aa28.42■■■□□ 2.14
CSNK1E-207ENST00000430335 NUTM2FA1L443 756 aa28.41■■■□□ 2.14
CSNK1E-207ENST00000430335 QRICH2Q9H0J4 1663 aa28.41■■■□□ 2.14
CSNK1E-207ENST00000430335 SBNO2Q9Y2G9 1366 aa28.4■■■□□ 2.14
CSNK1E-207ENST00000430335 TULP4Q9NRJ4 1543 aa28.39■■■□□ 2.14
CSNK1E-207ENST00000430335 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
CSNK1E-207ENST00000430335 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
CSNK1E-207ENST00000430335 AHDC1Q5TGY3 1603 aaPredicted RBP28.38■■■□□ 2.13
CSNK1E-207ENST00000430335 USP47Q96K76 1375 aa28.36■■■□□ 2.13
CSNK1E-207ENST00000430335 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
CSNK1E-207ENST00000430335 USP32Q8NFA0 1604 aa28.34■■■□□ 2.13
CSNK1E-207ENST00000430335 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
CSNK1E-207ENST00000430335 ST20-MTHFSA0A0A6YYL1 179 aa28.33■■■□□ 2.13
CSNK1E-207ENST00000430335 NUDT16Q96DE0 195 aaKnown RBP28.32■■■□□ 2.12
CSNK1E-207ENST00000430335 ATP7BP35670 1465 aa28.32■■■□□ 2.12
CSNK1E-207ENST00000430335 NHSL1Q5SYE7 1610 aa28.32■■■□□ 2.12
CSNK1E-207ENST00000430335 PHF8Q9UPP1 1060 aa28.31■■■□□ 2.12
CSNK1E-207ENST00000430335 PHLPP1O60346 1717 aa28.3■■■□□ 2.12
CSNK1E-207ENST00000430335 NPHP3Q7Z494 1330 aa28.3■■■□□ 2.12
CSNK1E-207ENST00000430335 SLC24A1O60721 1099 aa28.3■■■□□ 2.12
CSNK1E-207ENST00000430335 KIF1AQ12756 1690 aa28.29■■■□□ 2.12
CSNK1E-207ENST00000430335 SRPK2P78362 688 aaKnown RBP28.29■■■□□ 2.12
CSNK1E-207ENST00000430335 TESK2Q96S53 571 aa28.29■■■□□ 2.12
CSNK1E-207ENST00000430335 DDX17Q92841 729 aaKnown RBP28.28■■■□□ 2.12
CSNK1E-207ENST00000430335 CCDC61Q9Y6R9 512 aa28.28■■■□□ 2.12
CSNK1E-207ENST00000430335 COL16A1Q07092 1604 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-207ENST00000430335 RGPD8O14715 1765 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-207ENST00000430335 SOS2Q07890 1332 aaPredicted RBP28.27■■■□□ 2.12
CSNK1E-207ENST00000430335 FOXO3O43524 673 aa28.27■■■□□ 2.12
CSNK1E-207ENST00000430335 CABP2Q9NPB3 220 aa28.27■■■□□ 2.12
CSNK1E-207ENST00000430335 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
CSNK1E-207ENST00000430335 PLEKHG3A1L390 1219 aa28.22■■■□□ 2.11
CSNK1E-207ENST00000430335 LRRC59Q96AG4 307 aaKnown RBP28.22■■■□□ 2.11
CSNK1E-207ENST00000430335 PUS7Q96PZ0 661 aaKnown RBP28.22■■■□□ 2.11
CSNK1E-207ENST00000430335 PXDNQ92626 1479 aa28.21■■■□□ 2.11
CSNK1E-207ENST00000430335 ITSN1Q15811 1721 aa28.21■■■□□ 2.11
CSNK1E-207ENST00000430335 EIF4G2P78344 907 aaKnown RBP eCLIP28.21■■■□□ 2.11
CSNK1E-207ENST00000430335 TOPAZ1Q8N9V7 1692 aa28.21■■■□□ 2.11
CSNK1E-207ENST00000430335 JCADQ9P266 1359 aa28.21■■■□□ 2.11
CSNK1E-207ENST00000430335 ATAD2Q6PL18 1390 aa28.2■■■□□ 2.1
CSNK1E-207ENST00000430335 KRT28Q7Z3Y7 464 aa28.18■■■□□ 2.1
CSNK1E-207ENST00000430335 NGDNQ8NEJ9 315 aaKnown RBP28.18■■■□□ 2.1
CSNK1E-207ENST00000430335 PPIP5K1Q6PFW1 1433 aa28.18■■■□□ 2.1
CSNK1E-207ENST00000430335 POLR3AO14802 1390 aaPredicted RBP28.17■■■□□ 2.1
CSNK1E-207ENST00000430335 PSME1Q06323 249 aa28.17■■■□□ 2.1
CSNK1E-207ENST00000430335 TMF1P82094 1093 aa28.16■■■□□ 2.1
CSNK1E-207ENST00000430335 HSPA5P11021 654 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-207ENST00000430335 XPCQ01831 940 aaPredicted RBP28.15■■■□□ 2.1
CSNK1E-207ENST00000430335 CABP1Q9NZU7 370 aa28.14■■■□□ 2.1
CSNK1E-207ENST00000430335 ACEP12821 1306 aa28.14■■■□□ 2.09
CSNK1E-207ENST00000430335 SBNO1A3KN83 1393 aa28.13■■■□□ 2.09
CSNK1E-207ENST00000430335 DISP3Q9P2K9 1392 aa28.11■■■□□ 2.09
CSNK1E-207ENST00000430335 SHPRHQ149N8 1683 aa28.11■■■□□ 2.09
CSNK1E-207ENST00000430335 SPATA31A3Q5VYP0 1347 aa28.11■■■□□ 2.09
CSNK1E-207ENST00000430335 PNPLA6Q8IY17 1366 aa28.11■■■□□ 2.09
CSNK1E-207ENST00000430335 CDCA8Q53HL2 280 aa28.1■■■□□ 2.09
CSNK1E-207ENST00000430335 SPATA31A6Q5VVP1 1343 aa28.1■■■□□ 2.09
CSNK1E-207ENST00000430335 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
CSNK1E-207ENST00000430335 BRD4O60885 1362 aaPredicted RBP28.06■■■□□ 2.08
CSNK1E-207ENST00000430335 NINLQ9Y2I6 1382 aa28.06■■■□□ 2.08
CSNK1E-207ENST00000430335 ZNF692Q9BU19 519 aaPredicted RBP28.05■■■□□ 2.08
CSNK1E-207ENST00000430335 TRPM3Q9HCF6 1732 aaPredicted RBP28.04■■■□□ 2.08
CSNK1E-207ENST00000430335 CPSF1Q10570 1443 aaKnown RBP28.03■■■□□ 2.08
CSNK1E-207ENST00000430335 ARHGEF10O15013 1369 aa28.03■■■□□ 2.08
CSNK1E-207ENST00000430335 TMC1Q8TDI8 760 aa28.02■■■□□ 2.08
CSNK1E-207ENST00000430335 SLC12A5Q9H2X9 1139 aa28.02■■■□□ 2.08
CSNK1E-207ENST00000430335 USP6P35125 1406 aa28.01■■■□□ 2.08
CSNK1E-207ENST00000430335 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
CSNK1E-207ENST00000430335 ZEB1P37275 1124 aaPredicted RBP28■■■□□ 2.07
CSNK1E-207ENST00000430335 PAK3O75914 559 aaPredicted RBP27.99■■■□□ 2.07
CSNK1E-207ENST00000430335 CD163L1Q9NR16 1453 aa27.98■■■□□ 2.07
CSNK1E-207ENST00000430335 SSH2Q76I76 1423 aa27.98■■■□□ 2.07
CSNK1E-207ENST00000430335 MED1Q15648 1581 aaPredicted RBP27.98■■■□□ 2.07
CSNK1E-207ENST00000430335 TERF2IPQ9NYB0 399 aa27.97■■■□□ 2.07
CSNK1E-207ENST00000430335 ALS2Q96Q42 1657 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms