RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SIRT1Q96EB6 747 aa25.3■■□□□ 1.64
CTSD-203ENST00000429746 ARHGEF28Q8N1W1 1705 aaKnown RBP25.29■■□□□ 1.64
CTSD-203ENST00000429746 ATF3P18847 181 aa25.28■■□□□ 1.64
CTSD-203ENST00000429746 NEUROD1Q13562 356 aa25.27■■□□□ 1.64
CTSD-203ENST00000429746 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
CTSD-203ENST00000429746 TRPM1Q7Z4N2 1603 aa25.26■■□□□ 1.63
CTSD-203ENST00000429746 AHDC1Q5TGY3 1603 aaPredicted RBP25.24■■□□□ 1.63
CTSD-203ENST00000429746 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
CTSD-203ENST00000429746 COL16A1Q07092 1604 aaPredicted RBP25.23■■□□□ 1.63
CTSD-203ENST00000429746 C1orf167Q5SNV9 1468 aa25.23■■□□□ 1.63
CTSD-203ENST00000429746 NBPF1Q3BBV0 1214 aa25.23■■□□□ 1.63
CTSD-203ENST00000429746 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
CTSD-203ENST00000429746 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
CTSD-203ENST00000429746 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
CTSD-203ENST00000429746 BRINP3Q76B58 766 aa25.21■■□□□ 1.63
CTSD-203ENST00000429746 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
CTSD-203ENST00000429746 NBPF8Q3BBV2 869 aa25.18■■□□□ 1.62
CTSD-203ENST00000429746 TRAK1Q9UPV9 953 aa25.18■■□□□ 1.62
CTSD-203ENST00000429746 JCADQ9P266 1359 aa25.18■■□□□ 1.62
CTSD-203ENST00000429746 USP32Q8NFA0 1604 aa25.16■■□□□ 1.62
CTSD-203ENST00000429746 RGPD8O14715 1765 aaPredicted RBP25.14■■□□□ 1.62
CTSD-203ENST00000429746 GPRASP1Q5JY77 1395 aa25.11■■□□□ 1.61
CTSD-203ENST00000429746 ORAI2Q96SN7 254 aa25.11■■□□□ 1.61
CTSD-203ENST00000429746 SAFB2Q14151 953 aaKnown RBP eCLIP25.1■■□□□ 1.61
CTSD-203ENST00000429746 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
CTSD-203ENST00000429746 SPATA31A6Q5VVP1 1343 aa25.09■■□□□ 1.61
CTSD-203ENST00000429746 CLSPNQ9HAW4 1339 aa25.09■■□□□ 1.61
CTSD-203ENST00000429746 RALGAPBQ86X10 1494 aa25.08■■□□□ 1.6
CTSD-203ENST00000429746 DDX17Q92841 729 aaKnown RBP25.07■■□□□ 1.6
CTSD-203ENST00000429746 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
CTSD-203ENST00000429746 POGKQ9P215 609 aa25.06■■□□□ 1.6
CTSD-203ENST00000429746 SHPRHQ149N8 1683 aa25.06■■□□□ 1.6
CTSD-203ENST00000429746 MINK1Q8N4C8 1332 aaPredicted RBP25.04■■□□□ 1.6
CTSD-203ENST00000429746 QRICH2Q9H0J4 1663 aa25.04■■□□□ 1.6
CTSD-203ENST00000429746 PXDNQ92626 1479 aa25.03■■□□□ 1.6
CTSD-203ENST00000429746 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
CTSD-203ENST00000429746 HIRIP3Q9BW71 556 aaPredicted RBP25.03■■□□□ 1.6
CTSD-203ENST00000429746 PRR36Q9H6K5 1346 aa25.03■■□□□ 1.6
CTSD-203ENST00000429746 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
CTSD-203ENST00000429746 KIF1AQ12756 1690 aa25.02■■□□□ 1.6
CTSD-203ENST00000429746 NUTM2FA1L443 756 aa25.02■■□□□ 1.6
CTSD-203ENST00000429746 SOS2Q07890 1332 aaPredicted RBP25.01■■□□□ 1.59
CTSD-203ENST00000429746 ROCK2O75116 1388 aaKnown RBP25.01■■□□□ 1.59
CTSD-203ENST00000429746 LRRC59Q96AG4 307 aaKnown RBP25■■□□□ 1.59
CTSD-203ENST00000429746 ATP7BP35670 1465 aa25■■□□□ 1.59
CTSD-203ENST00000429746 TOPAZ1Q8N9V7 1692 aa24.99■■□□□ 1.59
CTSD-203ENST00000429746 WASLO00401 505 aaPredicted RBP24.98■■□□□ 1.59
CTSD-203ENST00000429746 ESCO1Q5FWF5 840 aa24.98■■□□□ 1.59
CTSD-203ENST00000429746 LRP6O75581 1613 aa24.97■■□□□ 1.59
CTSD-203ENST00000429746 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.58
CTSD-203ENST00000429746 PNPLA6Q8IY17 1366 aa24.93■■□□□ 1.58
CTSD-203ENST00000429746 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
CTSD-203ENST00000429746 COL22A1Q8NFW1 1626 aaPredicted RBP24.93■■□□□ 1.58
CTSD-203ENST00000429746 FOXO3O43524 673 aa24.92■■□□□ 1.58
CTSD-203ENST00000429746 ITSN1Q15811 1721 aa24.92■■□□□ 1.58
CTSD-203ENST00000429746 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
CTSD-203ENST00000429746 TRPM3Q9HCF6 1732 aaPredicted RBP24.91■■□□□ 1.58
CTSD-203ENST00000429746 NPHP3Q7Z494 1330 aa24.9■■□□□ 1.58
CTSD-203ENST00000429746 MEX3CQ5U5Q3 659 aaKnown RBP24.9■■□□□ 1.58
CTSD-203ENST00000429746 ZNF772Q68DY9 489 aaPredicted RBP24.9■■□□□ 1.58
CTSD-203ENST00000429746 PHF8Q9UPP1 1060 aa24.9■■□□□ 1.58
CTSD-203ENST00000429746 CDK19Q9BWU1 502 aa24.89■■□□□ 1.58
CTSD-203ENST00000429746 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
CTSD-203ENST00000429746 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
CTSD-203ENST00000429746 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
CTSD-203ENST00000429746 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
CTSD-203ENST00000429746 SBNO2Q9Y2G9 1366 aa24.87■■□□□ 1.57
CTSD-203ENST00000429746 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
CTSD-203ENST00000429746 PMFBP1Q8TBY8 1022 aa24.84■■□□□ 1.57
CTSD-203ENST00000429746 ALS2Q96Q42 1657 aa24.84■■□□□ 1.57
CTSD-203ENST00000429746 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
CTSD-203ENST00000429746 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
CTSD-203ENST00000429746 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
CTSD-203ENST00000429746 SPATA31A3Q5VYP0 1347 aa24.82■■□□□ 1.56
CTSD-203ENST00000429746 POLR3AO14802 1390 aaPredicted RBP24.81■■□□□ 1.56
CTSD-203ENST00000429746 KRT28Q7Z3Y7 464 aa24.8■■□□□ 1.56
CTSD-203ENST00000429746 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
CTSD-203ENST00000429746 TNS3Q68CZ2 1445 aa24.79■■□□□ 1.56
CTSD-203ENST00000429746 ABCA3Q99758 1704 aa24.79■■□□□ 1.56
CTSD-203ENST00000429746 CABP2Q9NPB3 220 aa24.79■■□□□ 1.56
CTSD-203ENST00000429746 CRYBG1Q9Y4K1 1723 aa24.78■■□□□ 1.56
CTSD-203ENST00000429746 PLEKHG3A1L390 1219 aa24.78■■□□□ 1.56
CTSD-203ENST00000429746 TESK2Q96S53 571 aa24.78■■□□□ 1.56
CTSD-203ENST00000429746 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
CTSD-203ENST00000429746 PPIP5K1Q6PFW1 1433 aa24.75■■□□□ 1.55
CTSD-203ENST00000429746 MARF1Q9Y4F3 1742 aaKnown RBP24.75■■□□□ 1.55
CTSD-203ENST00000429746 AFF2P51816 1311 aa24.74■■□□□ 1.55
CTSD-203ENST00000429746 EVC2Q86UK5 1308 aa24.74■■□□□ 1.55
CTSD-203ENST00000429746 USP47Q96K76 1375 aa24.73■■□□□ 1.55
CTSD-203ENST00000429746 ACEP12821 1306 aa24.73■■□□□ 1.55
CTSD-203ENST00000429746 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
CTSD-203ENST00000429746 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
CTSD-203ENST00000429746 RXRBP28702 533 aa24.72■■□□□ 1.55
CTSD-203ENST00000429746 AKAP12Q02952 1782 aa24.71■■□□□ 1.55
CTSD-203ENST00000429746 CDK12Q9NYV4 1490 aaPredicted RBP24.7■■□□□ 1.55
CTSD-203ENST00000429746 PSME1Q06323 249 aa24.7■■□□□ 1.54
CTSD-203ENST00000429746 SSH2Q76I76 1423 aa24.69■■□□□ 1.54
CTSD-203ENST00000429746 C8orf37Q96NL8 207 aa24.69■■□□□ 1.54
CTSD-203ENST00000429746 NGDNQ8NEJ9 315 aaKnown RBP24.68■■□□□ 1.54
CTSD-203ENST00000429746 CD163L1Q9NR16 1453 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms