RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
GARNL3-204ENST00000429629 PLEKHH1Q9ULM0 1364 aa21.22■□□□□ 0.99
GARNL3-204ENST00000429629 SLAIN2Q9P270 581 aa21.21■□□□□ 0.99
GARNL3-204ENST00000429629 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
GARNL3-204ENST00000429629 EIF3AQ14152 1382 aaKnown RBP21.2■□□□□ 0.98
GARNL3-204ENST00000429629 CENPJQ9HC77 1338 aaPredicted RBP21.19■□□□□ 0.98
GARNL3-204ENST00000429629 SBNO2Q9Y2G9 1366 aa21.14■□□□□ 0.98
GARNL3-204ENST00000429629 XIRP1Q702N8 1843 aaKnown RBP21.13■□□□□ 0.97
GARNL3-204ENST00000429629 WASLO00401 505 aaPredicted RBP21.13■□□□□ 0.97
GARNL3-204ENST00000429629 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
GARNL3-204ENST00000429629 MST1RQ04912 1400 aa21.11■□□□□ 0.97
GARNL3-204ENST00000429629 CDC42BPGQ6DT37 1551 aa21.1■□□□□ 0.97
GARNL3-204ENST00000429629 MINK1Q8N4C8 1332 aaPredicted RBP21.1■□□□□ 0.97
GARNL3-204ENST00000429629 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.09■□□□□ 0.97
GARNL3-204ENST00000429629 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
GARNL3-204ENST00000429629 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
GARNL3-204ENST00000429629 ADGRB2O60241 1585 aa21.08■□□□□ 0.97
GARNL3-204ENST00000429629 ANKARQ7Z5J8 1434 aa21.07■□□□□ 0.96
GARNL3-204ENST00000429629 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
GARNL3-204ENST00000429629 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
GARNL3-204ENST00000429629 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
GARNL3-204ENST00000429629 CDK19Q9BWU1 502 aa21.07■□□□□ 0.96
GARNL3-204ENST00000429629 USP47Q96K76 1375 aa21.07■□□□□ 0.96
GARNL3-204ENST00000429629 ARHGEF28Q8N1W1 1705 aaKnown RBP21.07■□□□□ 0.96
GARNL3-204ENST00000429629 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
GARNL3-204ENST00000429629 PIP4K2BP78356 416 aa21.06■□□□□ 0.96
GARNL3-204ENST00000429629 BRINP3Q76B58 766 aa21.06■□□□□ 0.96
GARNL3-204ENST00000429629 NALCNQ8IZF0 1738 aa21.05■□□□□ 0.96
GARNL3-204ENST00000429629 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
GARNL3-204ENST00000429629 TESK2Q96S53 571 aa21.05■□□□□ 0.96
GARNL3-204ENST00000429629 CCDC61Q9Y6R9 512 aa21.03■□□□□ 0.96
GARNL3-204ENST00000429629 NUDT16Q96DE0 195 aaKnown RBP21.02■□□□□ 0.96
GARNL3-204ENST00000429629 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
GARNL3-204ENST00000429629 ORAI2Q96SN7 254 aa21.01■□□□□ 0.95
GARNL3-204ENST00000429629 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
GARNL3-204ENST00000429629 PLEKHG3A1L390 1219 aa20.99■□□□□ 0.95
GARNL3-204ENST00000429629 SRPK2P78362 688 aaKnown RBP20.99■□□□□ 0.95
GARNL3-204ENST00000429629 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
GARNL3-204ENST00000429629 PRR36Q9H6K5 1346 aa20.99■□□□□ 0.95
GARNL3-204ENST00000429629 TULP4Q9NRJ4 1543 aa20.99■□□□□ 0.95
GARNL3-204ENST00000429629 TMF1P82094 1093 aa20.98■□□□□ 0.95
GARNL3-204ENST00000429629 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
GARNL3-204ENST00000429629 PHF8Q9UPP1 1060 aa20.98■□□□□ 0.95
GARNL3-204ENST00000429629 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
GARNL3-204ENST00000429629 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
GARNL3-204ENST00000429629 ATAD2Q6PL18 1390 aa20.96■□□□□ 0.95
GARNL3-204ENST00000429629 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
GARNL3-204ENST00000429629 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
GARNL3-204ENST00000429629 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
GARNL3-204ENST00000429629 HSPA1LP34931 641 aa20.94■□□□□ 0.94
GARNL3-204ENST00000429629 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
GARNL3-204ENST00000429629 ATP7BP35670 1465 aa20.94■□□□□ 0.94
GARNL3-204ENST00000429629 FOXO3O43524 673 aa20.92■□□□□ 0.94
GARNL3-204ENST00000429629 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
GARNL3-204ENST00000429629 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
GARNL3-204ENST00000429629 PSME1Q06323 249 aa20.91■□□□□ 0.94
GARNL3-204ENST00000429629 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
GARNL3-204ENST00000429629 AHDC1Q5TGY3 1603 aaPredicted RBP20.9■□□□□ 0.94
GARNL3-204ENST00000429629 POLR3AO14802 1390 aaPredicted RBP20.9■□□□□ 0.94
GARNL3-204ENST00000429629 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
GARNL3-204ENST00000429629 NINLQ9Y2I6 1382 aa20.89■□□□□ 0.93
GARNL3-204ENST00000429629 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
GARNL3-204ENST00000429629 CABP1Q9NZU7 370 aa20.89■□□□□ 0.93
GARNL3-204ENST00000429629 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
GARNL3-204ENST00000429629 KRT28Q7Z3Y7 464 aa20.88■□□□□ 0.93
GARNL3-204ENST00000429629 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
GARNL3-204ENST00000429629 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
GARNL3-204ENST00000429629 ACEP12821 1306 aa20.86■□□□□ 0.93
GARNL3-204ENST00000429629 PPIP5K1Q6PFW1 1433 aa20.86■□□□□ 0.93
GARNL3-204ENST00000429629 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
GARNL3-204ENST00000429629 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
GARNL3-204ENST00000429629 KIF1AQ12756 1690 aa20.84■□□□□ 0.93
GARNL3-204ENST00000429629 DDX17Q92841 729 aaKnown RBP20.84■□□□□ 0.93
GARNL3-204ENST00000429629 JCADQ9P266 1359 aa20.83■□□□□ 0.92
GARNL3-204ENST00000429629 PXDNQ92626 1479 aa20.82■□□□□ 0.92
GARNL3-204ENST00000429629 TERF2IPQ9NYB0 399 aa20.82■□□□□ 0.92
GARNL3-204ENST00000429629 SPATA31A3Q5VYP0 1347 aa20.81■□□□□ 0.92
GARNL3-204ENST00000429629 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
GARNL3-204ENST00000429629 NHSL1Q5SYE7 1610 aa20.81■□□□□ 0.92
GARNL3-204ENST00000429629 CPSF1Q10570 1443 aaKnown RBP20.8■□□□□ 0.92
GARNL3-204ENST00000429629 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
GARNL3-204ENST00000429629 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
GARNL3-204ENST00000429629 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
GARNL3-204ENST00000429629 COL16A1Q07092 1604 aaPredicted RBP20.78■□□□□ 0.92
GARNL3-204ENST00000429629 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.91
GARNL3-204ENST00000429629 ITSN1Q15811 1721 aa20.76■□□□□ 0.91
GARNL3-204ENST00000429629 ARHGEF10O15013 1369 aa20.76■□□□□ 0.91
GARNL3-204ENST00000429629 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
GARNL3-204ENST00000429629 SSH2Q76I76 1423 aa20.76■□□□□ 0.91
GARNL3-204ENST00000429629 C11orf95C9JLR9 678 aaPredicted RBP20.75■□□□□ 0.91
GARNL3-204ENST00000429629 USP6P35125 1406 aa20.75■□□□□ 0.91
GARNL3-204ENST00000429629 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
GARNL3-204ENST00000429629 PNPLA6Q8IY17 1366 aa20.74■□□□□ 0.91
GARNL3-204ENST00000429629 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
GARNL3-204ENST00000429629 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
GARNL3-204ENST00000429629 ANKRD36BQ8N2N9 1353 aa20.73■□□□□ 0.91
GARNL3-204ENST00000429629 KTN1Q86UP2 1357 aaKnown RBP20.72■□□□□ 0.91
GARNL3-204ENST00000429629 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
GARNL3-204ENST00000429629 CD163L1Q9NR16 1453 aa20.72■□□□□ 0.91
GARNL3-204ENST00000429629 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms