RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TET3O43151 1660 aa19.15■□□□□ 0.66
CACTIN-203ENST00000429344 IGHDP01880 384 aa19.15■□□□□ 0.66
CACTIN-203ENST00000429344 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.66
CACTIN-203ENST00000429344 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
CACTIN-203ENST00000429344 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
CACTIN-203ENST00000429344 SEC24BO95487 1268 aa19.13■□□□□ 0.65
CACTIN-203ENST00000429344 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
CACTIN-203ENST00000429344 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
CACTIN-203ENST00000429344 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
CACTIN-203ENST00000429344 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
CACTIN-203ENST00000429344 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
CACTIN-203ENST00000429344 CARD14Q9BXL6 1004 aa19.12■□□□□ 0.65
CACTIN-203ENST00000429344 KIDINS220Q9ULH0 1771 aa19.12■□□□□ 0.65
CACTIN-203ENST00000429344 NUTM2FA1L443 756 aa19.11■□□□□ 0.65
CACTIN-203ENST00000429344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
CACTIN-203ENST00000429344 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
CACTIN-203ENST00000429344 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
CACTIN-203ENST00000429344 GGNBP2Q9H3C7 697 aa19.11■□□□□ 0.65
CACTIN-203ENST00000429344 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
CACTIN-203ENST00000429344 NSD3Q9BZ95 1437 aa19.09■□□□□ 0.65
CACTIN-203ENST00000429344 BECN1Q14457 450 aa19.09■□□□□ 0.65
CACTIN-203ENST00000429344 MTHFSP49914 203 aa19.08■□□□□ 0.65
CACTIN-203ENST00000429344 HDGFL2Q7Z4V5 671 aaPredicted RBP19.08■□□□□ 0.65
CACTIN-203ENST00000429344 CFAP74Q9C0B2 1584 aa19.08■□□□□ 0.64
CACTIN-203ENST00000429344 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
CACTIN-203ENST00000429344 TNNQ9UQP3 1299 aa19.07■□□□□ 0.64
CACTIN-203ENST00000429344 TSPOAP1O95153 1857 aa19.06■□□□□ 0.64
CACTIN-203ENST00000429344 WAPLQ7Z5K2 1190 aa19.06■□□□□ 0.64
CACTIN-203ENST00000429344 MADDQ8WXG6 1647 aa19.05■□□□□ 0.64
CACTIN-203ENST00000429344 CEP152O94986 1710 aa19.05■□□□□ 0.64
CACTIN-203ENST00000429344 E9PSI1 815 aa19.05■□□□□ 0.64
CACTIN-203ENST00000429344 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
CACTIN-203ENST00000429344 RNF17Q9BXT8 1623 aaKnown RBP19.04■□□□□ 0.64
CACTIN-203ENST00000429344 PPRC1Q5VV67 1664 aaKnown RBP19.04■□□□□ 0.64
CACTIN-203ENST00000429344 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
CACTIN-203ENST00000429344 ABCC3O15438 1527 aa19.03■□□□□ 0.64
CACTIN-203ENST00000429344 SOX12O15370 315 aa19.03■□□□□ 0.64
CACTIN-203ENST00000429344 TXNDC2Q86VQ3 553 aa19.03■□□□□ 0.64
CACTIN-203ENST00000429344 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
CACTIN-203ENST00000429344 ASXL1Q8IXJ9 1541 aa19.01■□□□□ 0.63
CACTIN-203ENST00000429344 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
CACTIN-203ENST00000429344 CABP1Q9NZU7 370 aa19.01■□□□□ 0.63
CACTIN-203ENST00000429344 MFAP1P55081 439 aaKnown RBP19.01■□□□□ 0.63
CACTIN-203ENST00000429344 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
CACTIN-203ENST00000429344 KIF1BO60333 1816 aa19■□□□□ 0.63
CACTIN-203ENST00000429344 ZMYM4Q5VZL5 1548 aa19■□□□□ 0.63
CACTIN-203ENST00000429344 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
CACTIN-203ENST00000429344 FTSJ3Q8IY81 847 aaKnown RBP18.99■□□□□ 0.63
CACTIN-203ENST00000429344 MYOM2P54296 1465 aa18.99■□□□□ 0.63
CACTIN-203ENST00000429344 ERVK-7P63135 1459 aa18.98■□□□□ 0.63
CACTIN-203ENST00000429344 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
CACTIN-203ENST00000429344 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
CACTIN-203ENST00000429344 MAP3K4Q9Y6R4 1608 aa18.97■□□□□ 0.63
CACTIN-203ENST00000429344 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
CACTIN-203ENST00000429344 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
CACTIN-203ENST00000429344 FRMPD1Q5SYB0 1578 aa18.96■□□□□ 0.63
CACTIN-203ENST00000429344 WWC1Q8IX03 1113 aa18.96■□□□□ 0.63
CACTIN-203ENST00000429344 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
CACTIN-203ENST00000429344 PIK3C2GO75747 1445 aa18.96■□□□□ 0.63
CACTIN-203ENST00000429344 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
CACTIN-203ENST00000429344 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 RLBP1P12271 317 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 RIMBP3CA6NJZ7 1639 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 RIMBP3BA6NNM3 1639 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 RIMBP3Q9UFD9 1639 aa18.94■□□□□ 0.62
CACTIN-203ENST00000429344 NKTRP30414 1462 aaKnown RBP18.94■□□□□ 0.62
CACTIN-203ENST00000429344 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
CACTIN-203ENST00000429344 ZNF521Q96K83 1311 aa18.93■□□□□ 0.62
CACTIN-203ENST00000429344 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
CACTIN-203ENST00000429344 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
CACTIN-203ENST00000429344 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
CACTIN-203ENST00000429344 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
CACTIN-203ENST00000429344 FBLN1P23142 703 aa18.92■□□□□ 0.62
CACTIN-203ENST00000429344 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
CACTIN-203ENST00000429344 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
CACTIN-203ENST00000429344 ADGRB3O60242 1522 aa18.91■□□□□ 0.62
CACTIN-203ENST00000429344 ITPRIPQ8IWB1 547 aa18.9■□□□□ 0.62
CACTIN-203ENST00000429344 LAMC1P11047 1609 aa18.9■□□□□ 0.62
CACTIN-203ENST00000429344 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
CACTIN-203ENST00000429344 C14orf37Q86TY3 774 aa18.89■□□□□ 0.62
CACTIN-203ENST00000429344 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
CACTIN-203ENST00000429344 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
CACTIN-203ENST00000429344 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
CACTIN-203ENST00000429344 TBC1D2Q9BYX2 928 aa18.89■□□□□ 0.61
CACTIN-203ENST00000429344 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
CACTIN-203ENST00000429344 ZMYM3Q14202 1370 aa18.88■□□□□ 0.61
CACTIN-203ENST00000429344 ATAD2Q6PL18 1390 aa18.88■□□□□ 0.61
CACTIN-203ENST00000429344 USP19O94966 1318 aa18.88■□□□□ 0.61
CACTIN-203ENST00000429344 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
CACTIN-203ENST00000429344 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
CACTIN-203ENST00000429344 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
CACTIN-203ENST00000429344 GLIPR1L2Q4G1C9 344 aa18.87■□□□□ 0.61
CACTIN-203ENST00000429344 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
CACTIN-203ENST00000429344 SBNO2Q9Y2G9 1366 aa18.87■□□□□ 0.61
CACTIN-203ENST00000429344 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
CACTIN-203ENST00000429344 MROH2AA6NES4 1674 aa18.86■□□□□ 0.61
CACTIN-203ENST00000429344 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
CACTIN-203ENST00000429344 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms