RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DIAPH1O60610 1272 aaKnown RBP10.9□□□□□ -0.67
CTNND1-208ENST00000428599 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
CTNND1-208ENST00000428599 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
CTNND1-208ENST00000428599 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
CTNND1-208ENST00000428599 IQGAP2Q13576 1575 aa10.89□□□□□ -0.67
CTNND1-208ENST00000428599 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
CTNND1-208ENST00000428599 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
CTNND1-208ENST00000428599 RNF20Q5VTR2 975 aa10.88□□□□□ -0.67
CTNND1-208ENST00000428599 CCAR1Q8IX12 1150 aaKnown RBP10.88□□□□□ -0.67
CTNND1-208ENST00000428599 ANO2Q9NQ90 1003 aa10.88□□□□□ -0.67
CTNND1-208ENST00000428599 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.678e-9■□□□□ 11.1
CTNND1-208ENST00000428599 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
CTNND1-208ENST00000428599 CFAP70Q5T0N1 1121 aa10.87□□□□□ -0.67
CTNND1-208ENST00000428599 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
CTNND1-208ENST00000428599 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
CTNND1-208ENST00000428599 CDR1P51861 262 aa10.87□□□□□ -0.67
CTNND1-208ENST00000428599 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTNND1-208ENST00000428599 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
CTNND1-208ENST00000428599 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
CTNND1-208ENST00000428599 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
CTNND1-208ENST00000428599 PAF1Q8N7H5 531 aa10.86□□□□□ -0.67
CTNND1-208ENST00000428599 APAF1O14727 1248 aa10.86□□□□□ -0.67
CTNND1-208ENST00000428599 RDXP35241 583 aaKnown RBP10.86□□□□□ -0.67
CTNND1-208ENST00000428599 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
CTNND1-208ENST00000428599 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 BRMS1Q9HCU9 246 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 CUL7Q14999 1698 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
CTNND1-208ENST00000428599 REC8O95072 547 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 SKOR2Q2VWA4 1001 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-208ENST00000428599 RAPGEF4Q8WZA2 1011 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 UNC13AQ9UPW8 1703 aa10.85□□□□□ -0.67
CTNND1-208ENST00000428599 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-208ENST00000428599 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
CTNND1-208ENST00000428599 ROCK1Q13464 1354 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 E9PSI1 815 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 NAP1L1P55209 391 aaKnown RBP10.84□□□□□ -0.67
CTNND1-208ENST00000428599 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-208ENST00000428599 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-208ENST00000428599 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 EPS15P42566 896 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-208ENST00000428599 CCDC27Q2M243 656 aa10.84□□□□□ -0.67
CTNND1-208ENST00000428599 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.67
CTNND1-208ENST00000428599 RIPK4P57078 832 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 NLRP6P59044 892 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 ZFYVE27Q5T4F4 411 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 DDX49Q9Y6V7 483 aaKnown RBP10.83□□□□□ -0.68
CTNND1-208ENST00000428599 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 DAPK1P53355 1430 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 PRAM1Q96QH2 718 aa10.83□□□□□ -0.68
CTNND1-208ENST00000428599 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
CTNND1-208ENST00000428599 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
CTNND1-208ENST00000428599 XBP1P17861 261 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 POGZQ7Z3K3 1410 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 FYB1O15117 783 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 HMOX1P09601 288 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 RUFY1Q96T51 708 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 FOXD4L6Q3SYB3 417 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-208ENST00000428599 FOXD4L3Q6VB84 417 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-208ENST00000428599 RALYLQ86SE5 291 aaKnown RBP10.82□□□□□ -0.68
CTNND1-208ENST00000428599 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
CTNND1-208ENST00000428599 GPRASP1Q5JY77 1395 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 HSP90AB2PQ58FF8 381 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 NLRP2Q9NX02 1062 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 KIAA1107Q9UPP5 1409 aa10.82□□□□□ -0.68
CTNND1-208ENST00000428599 ERC2O15083 957 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 CCDC173Q0VFZ6 552 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 AK7Q96M32 723 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 OFD1O75665 1012 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 ZNF592Q92610 1267 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-208ENST00000428599 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 ABTB2Q8N961 1025 aa10.81□□□□□ -0.68
CTNND1-208ENST00000428599 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
CTNND1-208ENST00000428599 RIC3Q7Z5B4 369 aa10.8□□□□□ -0.68
CTNND1-208ENST00000428599 IPO9Q96P70 1041 aaKnown RBP10.8□□□□□ -0.68
CTNND1-208ENST00000428599 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
CTNND1-208ENST00000428599 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-208ENST00000428599 PLIN1O60240 522 aa10.8□□□□□ -0.68
CTNND1-208ENST00000428599 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
CTNND1-208ENST00000428599 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
CTNND1-208ENST00000428599 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
CTNND1-208ENST00000428599 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
CTNND1-208ENST00000428599 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-208ENST00000428599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-208ENST00000428599 CALRP27797 417 aaKnown RBP10.79□□□□□ -0.68
CTNND1-208ENST00000428599 DDX19BQ9UMR2 479 aa10.79□□□□□ -0.68
CTNND1-208ENST00000428599 SLC3A2P08195 630 aaKnown RBP10.78□□□□□ -0.68
CTNND1-208ENST00000428599 TEX35Q5T0J7 233 aa10.78□□□□□ -0.68
CTNND1-208ENST00000428599 CCDC73Q6ZRK6 1079 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms