RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
AC055811.2-201ENST00000427497 XRN1Q8IZH2 1706 aaKnown RBP24.88■■□□□ 1.57
AC055811.2-201ENST00000427497 SLAIN2Q9P270 581 aa24.88■■□□□ 1.57
AC055811.2-201ENST00000427497 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
AC055811.2-201ENST00000427497 C14orf37Q86TY3 774 aa24.86■■□□□ 1.57
AC055811.2-201ENST00000427497 ANP32CO43423 234 aa24.85■■□□□ 1.57
AC055811.2-201ENST00000427497 METP08581 1390 aa24.85■■□□□ 1.57
AC055811.2-201ENST00000427497 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.57
AC055811.2-201ENST00000427497 TMF1P82094 1093 aa24.82■■□□□ 1.56
AC055811.2-201ENST00000427497 SOCS7O14512 581 aa24.81■■□□□ 1.56
AC055811.2-201ENST00000427497 ASXL1Q8IXJ9 1541 aa24.81■■□□□ 1.56
AC055811.2-201ENST00000427497 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
AC055811.2-201ENST00000427497 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
AC055811.2-201ENST00000427497 SETD1AO15047 1707 aaKnown RBP24.79■■□□□ 1.56
AC055811.2-201ENST00000427497 PHLPP1O60346 1717 aa24.79■■□□□ 1.56
AC055811.2-201ENST00000427497 ATF3P18847 181 aa24.78■■□□□ 1.56
AC055811.2-201ENST00000427497 SBNO2Q9Y2G9 1366 aa24.78■■□□□ 1.56
AC055811.2-201ENST00000427497 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
AC055811.2-201ENST00000427497 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
AC055811.2-201ENST00000427497 CCER2I3L3R5 266 aa24.76■■□□□ 1.55
AC055811.2-201ENST00000427497 SLC24A1O60721 1099 aa24.76■■□□□ 1.55
AC055811.2-201ENST00000427497 ARHGEF28Q8N1W1 1705 aaKnown RBP24.76■■□□□ 1.55
AC055811.2-201ENST00000427497 DCCP43146 1447 aa24.75■■□□□ 1.55
AC055811.2-201ENST00000427497 QRICH2Q9H0J4 1663 aa24.73■■□□□ 1.55
AC055811.2-201ENST00000427497 TRAK1Q9UPV9 953 aa24.72■■□□□ 1.55
AC055811.2-201ENST00000427497 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
AC055811.2-201ENST00000427497 COL16A1Q07092 1604 aaPredicted RBP24.71■■□□□ 1.55
AC055811.2-201ENST00000427497 CDCA8Q53HL2 280 aa24.71■■□□□ 1.55
AC055811.2-201ENST00000427497 NALCNQ8IZF0 1738 aa24.7■■□□□ 1.54
AC055811.2-201ENST00000427497 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
AC055811.2-201ENST00000427497 ADGRL3Q9HAR2 1447 aa24.69■■□□□ 1.54
AC055811.2-201ENST00000427497 PRKRIP1Q9H875 184 aaPredicted RBP24.69■■□□□ 1.54
AC055811.2-201ENST00000427497 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
AC055811.2-201ENST00000427497 YTHDC2Q9H6S0 1430 aaKnown RBP24.68■■□□□ 1.54
AC055811.2-201ENST00000427497 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
AC055811.2-201ENST00000427497 JCADQ9P266 1359 aa24.66■■□□□ 1.54
AC055811.2-201ENST00000427497 MST1RQ04912 1400 aa24.66■■□□□ 1.54
AC055811.2-201ENST00000427497 MYOM1P52179 1685 aa24.66■■□□□ 1.54
AC055811.2-201ENST00000427497 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
AC055811.2-201ENST00000427497 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
AC055811.2-201ENST00000427497 PER1O15534 1290 aaPredicted RBP24.62■■□□□ 1.53
AC055811.2-201ENST00000427497 DLC1Q96QB1 1528 aa24.62■■□□□ 1.53
AC055811.2-201ENST00000427497 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
AC055811.2-201ENST00000427497 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
AC055811.2-201ENST00000427497 NHSL1Q5SYE7 1610 aa24.59■■□□□ 1.53
AC055811.2-201ENST00000427497 STK26Q9P289 416 aa24.59■■□□□ 1.53
AC055811.2-201ENST00000427497 SHPRHQ149N8 1683 aa24.58■■□□□ 1.53
AC055811.2-201ENST00000427497 PANK3Q9H999 370 aa24.58■■□□□ 1.53
AC055811.2-201ENST00000427497 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
AC055811.2-201ENST00000427497 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
AC055811.2-201ENST00000427497 KNDC1Q76NI1 1749 aa24.56■■□□□ 1.52
AC055811.2-201ENST00000427497 PUS7Q96PZ0 661 aaKnown RBP24.56■■□□□ 1.52
AC055811.2-201ENST00000427497 KTN1Q86UP2 1357 aaKnown RBP24.56■■□□□ 1.52
AC055811.2-201ENST00000427497 SPATA31A6Q5VVP1 1343 aa24.55■■□□□ 1.52
AC055811.2-201ENST00000427497 C1orf167Q5SNV9 1468 aa24.54■■□□□ 1.52
AC055811.2-201ENST00000427497 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
AC055811.2-201ENST00000427497 TECPR2O15040 1411 aa24.53■■□□□ 1.52
AC055811.2-201ENST00000427497 EVC2Q86UK5 1308 aa24.52■■□□□ 1.52
AC055811.2-201ENST00000427497 LRP6O75581 1613 aa24.52■■□□□ 1.52
AC055811.2-201ENST00000427497 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
AC055811.2-201ENST00000427497 CDC42BPGQ6DT37 1551 aa24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 RALBP1Q15311 655 aa24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 POTEAQ6S8J7 498 aa24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 DDX17Q92841 729 aaKnown RBP24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 POGKQ9P215 609 aa24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
AC055811.2-201ENST00000427497 SIRT1Q96EB6 747 aa24.48■■□□□ 1.51
AC055811.2-201ENST00000427497 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
AC055811.2-201ENST00000427497 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
AC055811.2-201ENST00000427497 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
AC055811.2-201ENST00000427497 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
AC055811.2-201ENST00000427497 WAPLQ7Z5K2 1190 aa24.46■■□□□ 1.51
AC055811.2-201ENST00000427497 MEX3CQ5U5Q3 659 aaKnown RBP24.44■■□□□ 1.5
AC055811.2-201ENST00000427497 NPC1L1Q9UHC9 1359 aa24.44■■□□□ 1.5
AC055811.2-201ENST00000427497 PLEKHH1Q9ULM0 1364 aa24.44■■□□□ 1.5
AC055811.2-201ENST00000427497 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
AC055811.2-201ENST00000427497 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
AC055811.2-201ENST00000427497 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
AC055811.2-201ENST00000427497 MRS2Q9HD23 443 aa24.42■■□□□ 1.5
AC055811.2-201ENST00000427497 CNGB1Q14028 1251 aaPredicted RBP24.41■■□□□ 1.5
AC055811.2-201ENST00000427497 AMER1Q5JTC6 1135 aaPredicted RBP24.41■■□□□ 1.5
AC055811.2-201ENST00000427497 NUTM2BA6NNL0 878 aaPredicted RBP24.4■■□□□ 1.5
AC055811.2-201ENST00000427497 NUTM2EB1AL46 878 aaPredicted RBP24.4■■□□□ 1.5
AC055811.2-201ENST00000427497 NUTM2AQ8IVF1 878 aaPredicted RBP24.4■■□□□ 1.5
AC055811.2-201ENST00000427497 PNPLA6Q8IY17 1366 aa24.4■■□□□ 1.5
AC055811.2-201ENST00000427497 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
AC055811.2-201ENST00000427497 NINLQ9Y2I6 1382 aa24.39■■□□□ 1.5
AC055811.2-201ENST00000427497 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.5
AC055811.2-201ENST00000427497 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
AC055811.2-201ENST00000427497 CARD14Q9BXL6 1004 aa24.38■■□□□ 1.49
AC055811.2-201ENST00000427497 SLC12A5Q9H2X9 1139 aa24.38■■□□□ 1.49
AC055811.2-201ENST00000427497 CC2D1BQ5T0F9 858 aaKnown RBP24.37■■□□□ 1.49
AC055811.2-201ENST00000427497 BRD4O60885 1362 aaPredicted RBP24.37■■□□□ 1.49
AC055811.2-201ENST00000427497 FMN2Q9NZ56 1722 aa24.37■■□□□ 1.49
AC055811.2-201ENST00000427497 ESCO1Q5FWF5 840 aa24.37■■□□□ 1.49
AC055811.2-201ENST00000427497 SRPK2P78362 688 aaKnown RBP24.36■■□□□ 1.49
AC055811.2-201ENST00000427497 USP32Q8NFA0 1604 aa24.36■■□□□ 1.49
AC055811.2-201ENST00000427497 ZNF772Q68DY9 489 aaPredicted RBP24.35■■□□□ 1.49
AC055811.2-201ENST00000427497 TMC1Q8TDI8 760 aa24.35■■□□□ 1.49
AC055811.2-201ENST00000427497 CDK19Q9BWU1 502 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms