RNA–Protein interactions for RNA: ENST00000427362.2

SCML1-206, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 5

Gene SCML1, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-206ENST00000427362 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
SCML1-206ENST00000427362 COL9A1P20849 921 aa12.78□□□□□ -0.36
SCML1-206ENST00000427362 E2F4Q16254 413 aa12.78□□□□□ -0.36
SCML1-206ENST00000427362 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
SCML1-206ENST00000427362 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
SCML1-206ENST00000427362 ZNF518AQ6AHZ1 1483 aa12.77□□□□□ -0.37
SCML1-206ENST00000427362 ONECUT3O60422 494 aaPredicted RBP12.76□□□□□ -0.37
SCML1-206ENST00000427362 RABGEF1Q9UJ41 708 aa12.76□□□□□ -0.37
SCML1-206ENST00000427362 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
SCML1-206ENST00000427362 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
SCML1-206ENST00000427362 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
SCML1-206ENST00000427362 ABCC1P33527 1531 aa12.76□□□□□ -0.37
SCML1-206ENST00000427362 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
SCML1-206ENST00000427362 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
SCML1-206ENST00000427362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCML1-206ENST00000427362 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
SCML1-206ENST00000427362 RAPGEF3O95398 923 aa12.74□□□□□ -0.37
SCML1-206ENST00000427362 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
SCML1-206ENST00000427362 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
SCML1-206ENST00000427362 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
SCML1-206ENST00000427362 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
SCML1-206ENST00000427362 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
SCML1-206ENST00000427362 HNRNPMP52272 730 aaKnown RBP eCLIP12.73□□□□□ -0.373e-7■■■□□ 18.5
SCML1-206ENST00000427362 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
SCML1-206ENST00000427362 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
SCML1-206ENST00000427362 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
SCML1-206ENST00000427362 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 DDX12PQ92771 950 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 PTPN23Q9H3S7 1636 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
SCML1-206ENST00000427362 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
SCML1-206ENST00000427362 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
SCML1-206ENST00000427362 KDM5CP41229 1560 aa12.71□□□□□ -0.37
SCML1-206ENST00000427362 SYCP2Q9BX26 1530 aa12.71□□□□□ -0.38
SCML1-206ENST00000427362 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.38
SCML1-206ENST00000427362 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
SCML1-206ENST00000427362 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.38
SCML1-206ENST00000427362 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.38
SCML1-206ENST00000427362 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
SCML1-206ENST00000427362 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
SCML1-206ENST00000427362 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
SCML1-206ENST00000427362 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
SCML1-206ENST00000427362 EN1Q05925 392 aaPredicted RBP12.68□□□□□ -0.38
SCML1-206ENST00000427362 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
SCML1-206ENST00000427362 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
SCML1-206ENST00000427362 WNT2BQ93097 391 aa12.67□□□□□ -0.38
SCML1-206ENST00000427362 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
SCML1-206ENST00000427362 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
SCML1-206ENST00000427362 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
SCML1-206ENST00000427362 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
SCML1-206ENST00000427362 PTPN5P54829 565 aa12.65□□□□□ -0.38
SCML1-206ENST00000427362 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
SCML1-206ENST00000427362 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
SCML1-206ENST00000427362 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
SCML1-206ENST00000427362 ATP10AO60312 1499 aa12.65□□□□□ -0.38
SCML1-206ENST00000427362 DAPK1P53355 1430 aa12.64□□□□□ -0.39
SCML1-206ENST00000427362 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
SCML1-206ENST00000427362 NBR1Q14596 966 aa12.64□□□□□ -0.39
SCML1-206ENST00000427362 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
SCML1-206ENST00000427362 ABCC5O15440 1437 aa12.63□□□□□ -0.39
SCML1-206ENST00000427362 ATP7AQ04656 1500 aa12.63□□□□□ -0.39
SCML1-206ENST00000427362 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SCML1-206ENST00000427362 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
SCML1-206ENST00000427362 KIDINS220Q9ULH0 1771 aa12.62□□□□□ -0.39
SCML1-206ENST00000427362 ANKRD30AQ9BXX3 1397 aa12.62□□□□□ -0.39
SCML1-206ENST00000427362 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
SCML1-206ENST00000427362 INO80Q9ULG1 1556 aaPredicted RBP12.61□□□□□ -0.39
SCML1-206ENST00000427362 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
SCML1-206ENST00000427362 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
SCML1-206ENST00000427362 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
SCML1-206ENST00000427362 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
SCML1-206ENST00000427362 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
SCML1-206ENST00000427362 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
SCML1-206ENST00000427362 CROCC2H7BZ55 1655 aa12.6□□□□□ -0.39
SCML1-206ENST00000427362 DHX29Q7Z478 1369 aaKnown RBP12.59□□□□□ -0.39
SCML1-206ENST00000427362 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
SCML1-206ENST00000427362 MAP3K7O43318 606 aa12.59□□□□□ -0.39
SCML1-206ENST00000427362 ADGRL2O95490 1459 aa12.59□□□□□ -0.39
SCML1-206ENST00000427362 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
SCML1-206ENST00000427362 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
SCML1-206ENST00000427362 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
SCML1-206ENST00000427362 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
SCML1-206ENST00000427362 A2MP01023 1474 aa12.58□□□□□ -0.4
SCML1-206ENST00000427362 ARID4BQ4LE39 1312 aaPredicted RBP12.58□□□□□ -0.4
SCML1-206ENST00000427362 AGLP35573 1532 aa12.57□□□□□ -0.4
SCML1-206ENST00000427362 OSBPP22059 807 aa12.57□□□□□ -0.4
SCML1-206ENST00000427362 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
SCML1-206ENST00000427362 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
SCML1-206ENST00000427362 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
SCML1-206ENST00000427362 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 CHIC2Q9UKJ5 165 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 DUOX2Q9NRD8 1548 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
SCML1-206ENST00000427362 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms