RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
POLR2J4-202ENST00000427076 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
POLR2J4-202ENST00000427076 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
POLR2J4-202ENST00000427076 ARHGAP35Q9NRY4 1499 aa13.69□□□□□ -0.22
POLR2J4-202ENST00000427076 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
POLR2J4-202ENST00000427076 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
POLR2J4-202ENST00000427076 TAX1BP1Q86VP1 789 aa13.69□□□□□ -0.22
POLR2J4-202ENST00000427076 DEF6Q9H4E7 631 aa13.69□□□□□ -0.22
POLR2J4-202ENST00000427076 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 KIAA0754O94854 1291 aa13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 IFIT2P09913 472 aaKnown RBP13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
POLR2J4-202ENST00000427076 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
POLR2J4-202ENST00000427076 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
POLR2J4-202ENST00000427076 ERICH2A1L162 156 aa13.67□□□□□ -0.22
POLR2J4-202ENST00000427076 TRDNQ13061 729 aa13.67□□□□□ -0.22
POLR2J4-202ENST00000427076 REC8O95072 547 aa13.66□□□□□ -0.22
POLR2J4-202ENST00000427076 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
POLR2J4-202ENST00000427076 MYO6Q9UM54 1294 aa13.66□□□□□ -0.22
POLR2J4-202ENST00000427076 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
POLR2J4-202ENST00000427076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.228e-7■■■■□ 22.1
POLR2J4-202ENST00000427076 KIF3BO15066 747 aa13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 ZRSR2Q15696 482 aaKnown RBP13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 NAT10Q9H0A0 1025 aaKnown RBP13.65□□□□□ -0.22
POLR2J4-202ENST00000427076 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 NUP155O75694 1391 aa13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR2J4-202ENST00000427076 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 POLR3GO15318 223 aaPredicted RBP13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 CEBPZQ03701 1054 aaKnown RBP13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 TNIKQ9UKE5 1360 aa13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 MTERF4Q7Z6M4 381 aaKnown RBP13.63□□□□□ -0.23
POLR2J4-202ENST00000427076 HNRNPMP52272 730 aaKnown RBP eCLIP13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 CUX2O14529 1486 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 TRAK2O60296 914 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 VGLL3A8MV65 326 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 MRE11P49959 708 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
POLR2J4-202ENST00000427076 CLGNO14967 610 aa13.61□□□□□ -0.23
POLR2J4-202ENST00000427076 UBE2Q2Q8WVN8 375 aa13.61□□□□□ -0.23
POLR2J4-202ENST00000427076 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
POLR2J4-202ENST00000427076 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
POLR2J4-202ENST00000427076 NUCB2P80303 420 aa13.61□□□□□ -0.23
POLR2J4-202ENST00000427076 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 NF2P35240 595 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
POLR2J4-202ENST00000427076 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 ERLIN2O94905 339 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 SYCP1Q15431 976 aa13.59□□□□□ -0.23
POLR2J4-202ENST00000427076 CCDC181Q5TID7 509 aa13.58□□□□□ -0.23
POLR2J4-202ENST00000427076 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 COG3Q96JB2 828 aa13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 NEUROD6Q96NK8 337 aa13.58□□□□□ -0.24
POLR2J4-202ENST00000427076 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.244e-12■■■■■ 26.8
POLR2J4-202ENST00000427076 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 INCENPQ9NQS7 918 aa13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 CCDC97Q96F63 343 aaPredicted RBP13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 BRMS1Q9HCU9 246 aa13.57□□□□□ -0.24
POLR2J4-202ENST00000427076 TEFQ10587 303 aa13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 SERPINC1P01008 464 aa13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 ZNF428Q96B54 188 aa13.56□□□□□ -0.24
POLR2J4-202ENST00000427076 GTF2A1P52655 376 aaPredicted RBP13.55□□□□□ -0.24
POLR2J4-202ENST00000427076 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
POLR2J4-202ENST00000427076 RNF187Q5TA31 235 aaPredicted RBP13.55□□□□□ -0.24
POLR2J4-202ENST00000427076 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
POLR2J4-202ENST00000427076 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms