RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ARHGAP23Q9P227 1491 aa23.63■■□□□ 1.37
FN1-208ENST00000426059 SRPK2P78362 688 aaKnown RBP23.63■■□□□ 1.37
FN1-208ENST00000426059 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
FN1-208ENST00000426059 ABCC11Q96J66 1382 aa23.62■■□□□ 1.37
FN1-208ENST00000426059 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
FN1-208ENST00000426059 DLC1Q96QB1 1528 aa23.58■■□□□ 1.37
FN1-208ENST00000426059 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
FN1-208ENST00000426059 CDK19Q9BWU1 502 aa23.57■■□□□ 1.36
FN1-208ENST00000426059 SETD1BQ9UPS6 1966 aaKnown RBP23.55■■□□□ 1.36
FN1-208ENST00000426059 MED14O60244 1454 aa23.54■■□□□ 1.36
FN1-208ENST00000426059 ROBO2Q9HCK4 1378 aa23.53■■□□□ 1.36
FN1-208ENST00000426059 PTPRUQ92729 1446 aa23.53■■□□□ 1.36
FN1-208ENST00000426059 NLRP13Q86W25 1043 aa23.52■■□□□ 1.36
FN1-208ENST00000426059 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
FN1-208ENST00000426059 PUS7Q96PZ0 661 aaKnown RBP23.52■■□□□ 1.36
FN1-208ENST00000426059 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
FN1-208ENST00000426059 KNDC1Q76NI1 1749 aa23.51■■□□□ 1.35
FN1-208ENST00000426059 SENP3-EIF4A1A0A087X0R7 540 aa23.51■■□□□ 1.35
FN1-208ENST00000426059 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
FN1-208ENST00000426059 TECPR2O15040 1411 aa23.5■■□□□ 1.35
FN1-208ENST00000426059 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
FN1-208ENST00000426059 AMOTL2Q9Y2J4 779 aa23.49■■□□□ 1.35
FN1-208ENST00000426059 TBX22Q9Y458 520 aa23.49■■□□□ 1.35
FN1-208ENST00000426059 CPS1P31327 1500 aa23.49■■□□□ 1.35
FN1-208ENST00000426059 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
FN1-208ENST00000426059 ANKLE2Q86XL3 938 aa23.48■■□□□ 1.35
FN1-208ENST00000426059 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
FN1-208ENST00000426059 ATAD2Q6PL18 1390 aa23.47■■□□□ 1.35
FN1-208ENST00000426059 PPP2R1AP30153 589 aa23.47■■□□□ 1.35
FN1-208ENST00000426059 CABP1Q9NZU7 370 aa23.47■■□□□ 1.35
FN1-208ENST00000426059 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
FN1-208ENST00000426059 A0A1W2PP64 1363 aa23.46■■□□□ 1.35
FN1-208ENST00000426059 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.35
FN1-208ENST00000426059 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
FN1-208ENST00000426059 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
FN1-208ENST00000426059 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
FN1-208ENST00000426059 NCKAP5LQ9HCH0 1330 aa23.44■■□□□ 1.34
FN1-208ENST00000426059 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
FN1-208ENST00000426059 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
FN1-208ENST00000426059 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
FN1-208ENST00000426059 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
FN1-208ENST00000426059 DIP2AQ14689 1571 aa23.39■■□□□ 1.34
FN1-208ENST00000426059 NINLQ9Y2I6 1382 aa23.39■■□□□ 1.34
FN1-208ENST00000426059 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
FN1-208ENST00000426059 KCNA6P17658 529 aa23.39■■□□□ 1.33
FN1-208ENST00000426059 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
FN1-208ENST00000426059 MORC1Q86VD1 984 aa23.38■■□□□ 1.33
FN1-208ENST00000426059 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
FN1-208ENST00000426059 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
FN1-208ENST00000426059 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
FN1-208ENST00000426059 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
FN1-208ENST00000426059 PPIP5K1Q6PFW1 1433 aa23.35■■□□□ 1.33
FN1-208ENST00000426059 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
FN1-208ENST00000426059 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
FN1-208ENST00000426059 USP32Q8NFA0 1604 aa23.34■■□□□ 1.33
FN1-208ENST00000426059 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
FN1-208ENST00000426059 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
FN1-208ENST00000426059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.32■■□□□ 1.32
FN1-208ENST00000426059 PTCH1Q13635 1447 aa23.32■■□□□ 1.32
FN1-208ENST00000426059 CCDC61Q9Y6R9 512 aa23.32■■□□□ 1.32
FN1-208ENST00000426059 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
FN1-208ENST00000426059 ATP7BP35670 1465 aa23.3■■□□□ 1.32
FN1-208ENST00000426059 FYB1O15117 783 aa23.3■■□□□ 1.32
FN1-208ENST00000426059 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
FN1-208ENST00000426059 ADGRB2O60241 1585 aa23.29■■□□□ 1.32
FN1-208ENST00000426059 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
FN1-208ENST00000426059 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
FN1-208ENST00000426059 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
FN1-208ENST00000426059 PIK3R4Q99570 1358 aa23.28■■□□□ 1.32
FN1-208ENST00000426059 HSPA2P54652 639 aa23.27■■□□□ 1.32
FN1-208ENST00000426059 CPSF1Q10570 1443 aaKnown RBP23.25■■□□□ 1.31
FN1-208ENST00000426059 NSD2O96028 1365 aa23.25■■□□□ 1.31
FN1-208ENST00000426059 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
FN1-208ENST00000426059 MTHFSP49914 203 aa23.24■■□□□ 1.31
FN1-208ENST00000426059 RGPD8O14715 1765 aaPredicted RBP23.23■■□□□ 1.31
FN1-208ENST00000426059 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
FN1-208ENST00000426059 PMFBP1Q8TBY8 1022 aa23.22■■□□□ 1.31
FN1-208ENST00000426059 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
FN1-208ENST00000426059 FBLN1P23142 703 aa23.21■■□□□ 1.31
FN1-208ENST00000426059 ZRANB1Q9UGI0 708 aa23.21■■□□□ 1.31
FN1-208ENST00000426059 ACEP12821 1306 aa23.2■■□□□ 1.31
FN1-208ENST00000426059 NME9Q86XW9 330 aa23.2■■□□□ 1.3
FN1-208ENST00000426059 NKTRP30414 1462 aaKnown RBP23.2■■□□□ 1.3
FN1-208ENST00000426059 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
FN1-208ENST00000426059 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
FN1-208ENST00000426059 ANKRD26Q9UPS8 1709 aa23.19■■□□□ 1.3
FN1-208ENST00000426059 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
FN1-208ENST00000426059 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
FN1-208ENST00000426059 BLMP54132 1417 aaPredicted RBP23.18■■□□□ 1.3
FN1-208ENST00000426059 MON2Q7Z3U7 1717 aa23.17■■□□□ 1.3
FN1-208ENST00000426059 POLR3AO14802 1390 aaPredicted RBP23.17■■□□□ 1.3
FN1-208ENST00000426059 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
FN1-208ENST00000426059 NALCNQ8IZF0 1738 aa23.17■■□□□ 1.3
FN1-208ENST00000426059 PLEKHG3A1L390 1219 aa23.16■■□□□ 1.3
FN1-208ENST00000426059 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
FN1-208ENST00000426059 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
FN1-208ENST00000426059 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
FN1-208ENST00000426059 NGDNQ8NEJ9 315 aaKnown RBP23.11■■□□□ 1.29
FN1-208ENST00000426059 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
FN1-208ENST00000426059 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms