RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 NPC1L1Q9UHC9 1359 aa13.11□□□□□ -0.31
HDLBP-211ENST00000425989 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
HDLBP-211ENST00000425989 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
HDLBP-211ENST00000425989 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
HDLBP-211ENST00000425989 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
HDLBP-211ENST00000425989 CPS1P31327 1500 aa13.08□□□□□ -0.31
HDLBP-211ENST00000425989 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-211ENST00000425989 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
HDLBP-211ENST00000425989 TERF2IPQ9NYB0 399 aa13.08□□□□□ -0.32
HDLBP-211ENST00000425989 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-211ENST00000425989 FBXO41Q8TF61 875 aa13.07□□□□□ -0.32
HDLBP-211ENST00000425989 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-211ENST00000425989 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
HDLBP-211ENST00000425989 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
HDLBP-211ENST00000425989 KCNA6P17658 529 aa13.06□□□□□ -0.32
HDLBP-211ENST00000425989 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDLBP-211ENST00000425989 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
HDLBP-211ENST00000425989 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-211ENST00000425989 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-211ENST00000425989 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
HDLBP-211ENST00000425989 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-211ENST00000425989 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
HDLBP-211ENST00000425989 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
HDLBP-211ENST00000425989 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
HDLBP-211ENST00000425989 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
HDLBP-211ENST00000425989 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
HDLBP-211ENST00000425989 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
HDLBP-211ENST00000425989 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
HDLBP-211ENST00000425989 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
HDLBP-211ENST00000425989 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-211ENST00000425989 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
HDLBP-211ENST00000425989 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
HDLBP-211ENST00000425989 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-211ENST00000425989 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
HDLBP-211ENST00000425989 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
HDLBP-211ENST00000425989 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
HDLBP-211ENST00000425989 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
HDLBP-211ENST00000425989 NSD2O96028 1365 aa13.01□□□□□ -0.33
HDLBP-211ENST00000425989 MYOM1P52179 1685 aa13.01□□□□□ -0.33
HDLBP-211ENST00000425989 ADGRB2O60241 1585 aa13□□□□□ -0.33
HDLBP-211ENST00000425989 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
HDLBP-211ENST00000425989 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
HDLBP-211ENST00000425989 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
HDLBP-211ENST00000425989 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
HDLBP-211ENST00000425989 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
HDLBP-211ENST00000425989 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
HDLBP-211ENST00000425989 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
HDLBP-211ENST00000425989 ATP7BP35670 1465 aa12.97□□□□□ -0.33
HDLBP-211ENST00000425989 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-211ENST00000425989 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
HDLBP-211ENST00000425989 USP32Q8NFA0 1604 aa12.96□□□□□ -0.33
HDLBP-211ENST00000425989 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.34
HDLBP-211ENST00000425989 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
HDLBP-211ENST00000425989 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-211ENST00000425989 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
HDLBP-211ENST00000425989 CPSF1Q10570 1443 aaKnown RBP12.94□□□□□ -0.34
HDLBP-211ENST00000425989 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
HDLBP-211ENST00000425989 INSRP06213 1382 aa12.94□□□□□ -0.34
HDLBP-211ENST00000425989 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
HDLBP-211ENST00000425989 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
HDLBP-211ENST00000425989 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
HDLBP-211ENST00000425989 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
HDLBP-211ENST00000425989 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
HDLBP-211ENST00000425989 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
HDLBP-211ENST00000425989 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
HDLBP-211ENST00000425989 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
HDLBP-211ENST00000425989 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
HDLBP-211ENST00000425989 FYB1O15117 783 aa12.91□□□□□ -0.34
HDLBP-211ENST00000425989 HSPA2P54652 639 aa12.91□□□□□ -0.34
HDLBP-211ENST00000425989 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
HDLBP-211ENST00000425989 CD163L1Q9NR16 1453 aa12.9□□□□□ -0.34
HDLBP-211ENST00000425989 TTC21AQ8NDW8 1320 aa12.89□□□□□ -0.35
HDLBP-211ENST00000425989 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
HDLBP-211ENST00000425989 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
HDLBP-211ENST00000425989 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
HDLBP-211ENST00000425989 STRCQ7RTU9 1775 aa12.89□□□□□ -0.35
HDLBP-211ENST00000425989 ACEP12821 1306 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-211ENST00000425989 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
HDLBP-211ENST00000425989 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-211ENST00000425989 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 AKAP12Q02952 1782 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
HDLBP-211ENST00000425989 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
HDLBP-211ENST00000425989 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
HDLBP-211ENST00000425989 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
HDLBP-211ENST00000425989 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
HDLBP-211ENST00000425989 ATF3P18847 181 aa12.86□□□□□ -0.35
HDLBP-211ENST00000425989 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
HDLBP-211ENST00000425989 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
HDLBP-211ENST00000425989 DCCP43146 1447 aa12.86□□□□□ -0.35
HDLBP-211ENST00000425989 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
HDLBP-211ENST00000425989 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
HDLBP-211ENST00000425989 COG3Q96JB2 828 aa12.85□□□□□ -0.35
HDLBP-211ENST00000425989 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
HDLBP-211ENST00000425989 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDLBP-211ENST00000425989 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-211ENST00000425989 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms