RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KCNA6P17658 529 aa14.27□□□□□ -0.13
MDC1-205ENST00000425072 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
MDC1-205ENST00000425072 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
MDC1-205ENST00000425072 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
MDC1-205ENST00000425072 TECPR2O15040 1411 aa14.25□□□□□ -0.13
MDC1-205ENST00000425072 POLR1AO95602 1720 aaPredicted RBP14.25□□□□□ -0.13
MDC1-205ENST00000425072 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
MDC1-205ENST00000425072 ASXL1Q8IXJ9 1541 aa14.23□□□□□ -0.13
MDC1-205ENST00000425072 MINK1Q8N4C8 1332 aaPredicted RBP14.22□□□□□ -0.13
MDC1-205ENST00000425072 ARHGEF28Q8N1W1 1705 aaKnown RBP14.22□□□□□ -0.13
MDC1-205ENST00000425072 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
MDC1-205ENST00000425072 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
MDC1-205ENST00000425072 STRCQ7RTU9 1775 aa14.22□□□□□ -0.13
MDC1-205ENST00000425072 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.13
MDC1-205ENST00000425072 CHD2O14647 1828 aaKnown RBP14.21□□□□□ -0.13
MDC1-205ENST00000425072 PTPRUQ92729 1446 aa14.21□□□□□ -0.13
MDC1-205ENST00000425072 WASLO00401 505 aaPredicted RBP14.2□□□□□ -0.14
MDC1-205ENST00000425072 KNDC1Q76NI1 1749 aa14.2□□□□□ -0.14
MDC1-205ENST00000425072 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
MDC1-205ENST00000425072 QRICH2Q9H0J4 1663 aa14.2□□□□□ -0.14
MDC1-205ENST00000425072 PROSER2Q86WR7 435 aaPredicted RBP14.19□□□□□ -0.14
MDC1-205ENST00000425072 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
MDC1-205ENST00000425072 ANP32CO43423 234 aa14.18□□□□□ -0.14
MDC1-205ENST00000425072 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
MDC1-205ENST00000425072 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
MDC1-205ENST00000425072 CPS1P31327 1500 aa14.17□□□□□ -0.14
MDC1-205ENST00000425072 PANK3Q9H999 370 aa14.17□□□□□ -0.14
MDC1-205ENST00000425072 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
MDC1-205ENST00000425072 PLEKHH1Q9ULM0 1364 aa14.17□□□□□ -0.14
MDC1-205ENST00000425072 ATAD2Q6PL18 1390 aa14.16□□□□□ -0.14
MDC1-205ENST00000425072 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
MDC1-205ENST00000425072 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
MDC1-205ENST00000425072 TERF2IPQ9NYB0 399 aa14.15□□□□□ -0.14
MDC1-205ENST00000425072 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
MDC1-205ENST00000425072 LTBP4Q8N2S1 1624 aa14.15□□□□□ -0.14
MDC1-205ENST00000425072 NUDT16Q96DE0 195 aaKnown RBP14.14□□□□□ -0.15
MDC1-205ENST00000425072 KNSTRNQ9Y448 316 aa14.14□□□□□ -0.15
MDC1-205ENST00000425072 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
MDC1-205ENST00000425072 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
MDC1-205ENST00000425072 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
MDC1-205ENST00000425072 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
MDC1-205ENST00000425072 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
MDC1-205ENST00000425072 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
MDC1-205ENST00000425072 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
MDC1-205ENST00000425072 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
MDC1-205ENST00000425072 CABP1Q9NZU7 370 aa14.11□□□□□ -0.15
MDC1-205ENST00000425072 MIER1Q8N108 512 aa14.1□□□□□ -0.15
MDC1-205ENST00000425072 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
MDC1-205ENST00000425072 PLEKHG3A1L390 1219 aa14.09□□□□□ -0.15
MDC1-205ENST00000425072 ATF3P18847 181 aa14.09□□□□□ -0.15
MDC1-205ENST00000425072 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
MDC1-205ENST00000425072 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
MDC1-205ENST00000425072 RALBP1Q15311 655 aa14.08□□□□□ -0.16
MDC1-205ENST00000425072 NWD1Q149M9 1564 aa14.08□□□□□ -0.16
MDC1-205ENST00000425072 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
MDC1-205ENST00000425072 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
MDC1-205ENST00000425072 RBM33Q96EV2 1170 aaKnown RBP14.06□□□□□ -0.16
MDC1-205ENST00000425072 PRKRIP1Q9H875 184 aaPredicted RBP14.06□□□□□ -0.16
MDC1-205ENST00000425072 ANKRD36BQ8N2N9 1353 aa14.06□□□□□ -0.16
MDC1-205ENST00000425072 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
MDC1-205ENST00000425072 CARD14Q9BXL6 1004 aa14.05□□□□□ -0.16
MDC1-205ENST00000425072 ADGRL3Q9HAR2 1447 aa14.05□□□□□ -0.16
MDC1-205ENST00000425072 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
MDC1-205ENST00000425072 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 ZNF335Q9H4Z2 1342 aaPredicted RBP14.04□□□□□ -0.16
MDC1-205ENST00000425072 TMEM94Q12767 1356 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 NPC1L1Q9UHC9 1359 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 PPIP5K1Q6PFW1 1433 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 ANKARQ7Z5J8 1434 aa14.04□□□□□ -0.16
MDC1-205ENST00000425072 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
MDC1-205ENST00000425072 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
MDC1-205ENST00000425072 MSH6P52701 1360 aa14.03□□□□□ -0.16
MDC1-205ENST00000425072 PRR36Q9H6K5 1346 aa14.02□□□□□ -0.17
MDC1-205ENST00000425072 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
MDC1-205ENST00000425072 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.17
MDC1-205ENST00000425072 ACEP12821 1306 aa14.01□□□□□ -0.17
MDC1-205ENST00000425072 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
MDC1-205ENST00000425072 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
MDC1-205ENST00000425072 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
MDC1-205ENST00000425072 ATP7BP35670 1465 aa14□□□□□ -0.17
MDC1-205ENST00000425072 DCCP43146 1447 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 MYOM1P52179 1685 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 PSME1Q06323 249 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
MDC1-205ENST00000425072 MORC1Q86VD1 984 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 CDC42BPGQ6DT37 1551 aa13.99□□□□□ -0.17
MDC1-205ENST00000425072 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
MDC1-205ENST00000425072 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
MDC1-205ENST00000425072 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
MDC1-205ENST00000425072 NSD2O96028 1365 aa13.98□□□□□ -0.17
MDC1-205ENST00000425072 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
MDC1-205ENST00000425072 ITSN1Q15811 1721 aa13.98□□□□□ -0.17
MDC1-205ENST00000425072 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
MDC1-205ENST00000425072 FYB1O15117 783 aa13.97□□□□□ -0.17
MDC1-205ENST00000425072 HSPA1LP34931 641 aa13.97□□□□□ -0.17
MDC1-205ENST00000425072 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms