RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 LRPPRCP42704 1394 aaKnown RBP27.42■■□□□ 1.98
SREBF1-206ENST00000423161 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
SREBF1-206ENST00000423161 AFF2P51816 1311 aa27.4■■□□□ 1.98
SREBF1-206ENST00000423161 SOS2Q07890 1332 aaPredicted RBP27.39■■□□□ 1.97
SREBF1-206ENST00000423161 ABCC11Q96J66 1382 aa27.37■■□□□ 1.97
SREBF1-206ENST00000423161 TMEM132EQ6IEE7 984 aa27.37■■□□□ 1.97
SREBF1-206ENST00000423161 WAPLQ7Z5K2 1190 aa27.36■■□□□ 1.97
SREBF1-206ENST00000423161 YTHDC2Q9H6S0 1430 aaKnown RBP27.35■■□□□ 1.97
SREBF1-206ENST00000423161 C8orf37Q96NL8 207 aa27.35■■□□□ 1.97
SREBF1-206ENST00000423161 MYOM2P54296 1465 aa27.35■■□□□ 1.97
SREBF1-206ENST00000423161 FMN2Q9NZ56 1722 aa27.35■■□□□ 1.97
SREBF1-206ENST00000423161 NRXN1Q9ULB1 1477 aa27.34■■□□□ 1.97
SREBF1-206ENST00000423161 RXRBP28702 533 aa27.34■■□□□ 1.97
SREBF1-206ENST00000423161 COL22A1Q8NFW1 1626 aaPredicted RBP27.34■■□□□ 1.97
SREBF1-206ENST00000423161 PLEKHH1Q9ULM0 1364 aa27.34■■□□□ 1.97
SREBF1-206ENST00000423161 ESCO1Q5FWF5 840 aa27.33■■□□□ 1.97
SREBF1-206ENST00000423161 NPHP3Q7Z494 1330 aa27.31■■□□□ 1.96
SREBF1-206ENST00000423161 CDK12Q9NYV4 1490 aaPredicted RBP27.31■■□□□ 1.96
SREBF1-206ENST00000423161 PXDNQ92626 1479 aa27.3■■□□□ 1.96
SREBF1-206ENST00000423161 NUTM2FA1L443 756 aa27.29■■□□□ 1.96
SREBF1-206ENST00000423161 ADAMTS2O95450 1211 aa27.29■■□□□ 1.96
SREBF1-206ENST00000423161 C14orf93Q9H972 538 aaKnown RBP27.29■■□□□ 1.96
SREBF1-206ENST00000423161 RGPD8O14715 1765 aaPredicted RBP27.27■■□□□ 1.96
SREBF1-206ENST00000423161 KIF1AQ12756 1690 aa27.27■■□□□ 1.96
SREBF1-206ENST00000423161 CFAP70Q5T0N1 1121 aa27.26■■□□□ 1.95
SREBF1-206ENST00000423161 NGLY1Q96IV0 654 aa27.26■■□□□ 1.95
SREBF1-206ENST00000423161 MARF1Q9Y4F3 1742 aaKnown RBP27.26■■□□□ 1.95
SREBF1-206ENST00000423161 DHX57Q6P158 1386 aaKnown RBP27.25■■□□□ 1.95
SREBF1-206ENST00000423161 FOXO3O43524 673 aa27.25■■□□□ 1.95
SREBF1-206ENST00000423161 QTRT2Q9H974 415 aaKnown RBP27.24■■□□□ 1.95
SREBF1-206ENST00000423161 XPCQ01831 940 aaPredicted RBP27.23■■□□□ 1.95
SREBF1-206ENST00000423161 SIRT1Q96EB6 747 aa27.23■■□□□ 1.95
SREBF1-206ENST00000423161 RGS12O14924 1447 aa27.2■■□□□ 1.94
SREBF1-206ENST00000423161 RBM6P78332 1123 aaKnown RBP27.2■■□□□ 1.94
SREBF1-206ENST00000423161 UPF1Q92900 1129 aaKnown RBP eCLIP27.2■■□□□ 1.94
SREBF1-206ENST00000423161 DLC1Q96QB1 1528 aa27.19■■□□□ 1.94
SREBF1-206ENST00000423161 ADGRB1O14514 1584 aa27.17■■□□□ 1.94
SREBF1-206ENST00000423161 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
SREBF1-206ENST00000423161 USP21Q9UK80 565 aa27.16■■□□□ 1.94
SREBF1-206ENST00000423161 SAFB2Q14151 953 aaKnown RBP eCLIP27.15■■□□□ 1.94
SREBF1-206ENST00000423161 HRCP23327 699 aa27.13■■□□□ 1.93
SREBF1-206ENST00000423161 FNBP4Q8N3X1 1017 aaPredicted RBP27.13■■□□□ 1.93
SREBF1-206ENST00000423161 ADGRB2O60241 1585 aa27.13■■□□□ 1.93
SREBF1-206ENST00000423161 POGKQ9P215 609 aa27.12■■□□□ 1.93
SREBF1-206ENST00000423161 KDM2AQ9Y2K7 1162 aa27.12■■□□□ 1.93
SREBF1-206ENST00000423161 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
SREBF1-206ENST00000423161 TRPC5Q9UL62 973 aaPredicted RBP27.11■■□□□ 1.93
SREBF1-206ENST00000423161 USP32Q8NFA0 1604 aa27.11■■□□□ 1.93
SREBF1-206ENST00000423161 SPATA31A3Q5VYP0 1347 aa27.11■■□□□ 1.93
SREBF1-206ENST00000423161 ATRNO75882 1429 aa27.1■■□□□ 1.93
SREBF1-206ENST00000423161 KRT28Q7Z3Y7 464 aa27.1■■□□□ 1.93
SREBF1-206ENST00000423161 PHF8Q9UPP1 1060 aa27.1■■□□□ 1.93
SREBF1-206ENST00000423161 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.08■■□□□ 1.93
SREBF1-206ENST00000423161 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
SREBF1-206ENST00000423161 TNS3Q68CZ2 1445 aa27.07■■□□□ 1.92
SREBF1-206ENST00000423161 ANKARQ7Z5J8 1434 aa27.07■■□□□ 1.92
SREBF1-206ENST00000423161 BCL9LQ86UU0 1499 aa27.06■■□□□ 1.92
SREBF1-206ENST00000423161 STAC3Q96MF2 364 aa27.05■■□□□ 1.92
SREBF1-206ENST00000423161 ABCA3Q99758 1704 aa27.04■■□□□ 1.92
SREBF1-206ENST00000423161 PSME1Q06323 249 aa27.04■■□□□ 1.92
SREBF1-206ENST00000423161 ARHGEF28Q8N1W1 1705 aaKnown RBP27.04■■□□□ 1.92
SREBF1-206ENST00000423161 MINK1Q8N4C8 1332 aaPredicted RBP27.01■■□□□ 1.91
SREBF1-206ENST00000423161 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
SREBF1-206ENST00000423161 SBNO1A3KN83 1393 aa27■■□□□ 1.91
SREBF1-206ENST00000423161 TULP4Q9NRJ4 1543 aa27■■□□□ 1.91
SREBF1-206ENST00000423161 TRPM3Q9HCF6 1732 aaPredicted RBP26.99■■□□□ 1.91
SREBF1-206ENST00000423161 PMFBP1Q8TBY8 1022 aa26.99■■□□□ 1.91
SREBF1-206ENST00000423161 SLIT2O94813 1529 aa26.99■■□□□ 1.91
SREBF1-206ENST00000423161 PLCH1Q4KWH8 1693 aa26.98■■□□□ 1.91
SREBF1-206ENST00000423161 EIF3AQ14152 1382 aaKnown RBP26.98■■□□□ 1.91
SREBF1-206ENST00000423161 ATAD2Q6PL18 1390 aa26.98■■□□□ 1.91
SREBF1-206ENST00000423161 HAP1P54257 671 aaPredicted RBP26.98■■□□□ 1.91
SREBF1-206ENST00000423161 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
SREBF1-206ENST00000423161 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
SREBF1-206ENST00000423161 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
SREBF1-206ENST00000423161 PLEKHG5O94827 1062 aa26.95■■□□□ 1.9
SREBF1-206ENST00000423161 CABLES1Q8TDN4 633 aa26.95■■□□□ 1.9
SREBF1-206ENST00000423161 GJD4Q96KN9 370 aaPredicted RBP26.95■■□□□ 1.9
SREBF1-206ENST00000423161 NWD2Q9ULI1 1742 aa26.95■■□□□ 1.9
SREBF1-206ENST00000423161 KIAA1210Q9ULL0 1709 aa26.95■■□□□ 1.9
SREBF1-206ENST00000423161 GLI3P10071 1580 aa26.94■■□□□ 1.9
SREBF1-206ENST00000423161 UNC5CLQ8IV45 518 aa26.94■■□□□ 1.9
SREBF1-206ENST00000423161 ALS2Q96Q42 1657 aa26.94■■□□□ 1.9
SREBF1-206ENST00000423161 PRR36Q9H6K5 1346 aa26.93■■□□□ 1.9
SREBF1-206ENST00000423161 WASLO00401 505 aaPredicted RBP26.93■■□□□ 1.9
SREBF1-206ENST00000423161 RALGAPBQ86X10 1494 aa26.92■■□□□ 1.9
SREBF1-206ENST00000423161 GPRASP1Q5JY77 1395 aa26.9■■□□□ 1.9
SREBF1-206ENST00000423161 BRWD3Q6RI45 1802 aa26.89■■□□□ 1.9
SREBF1-206ENST00000423161 EP400Q96L91 3159 aa26.87■■□□□ 1.89
SREBF1-206ENST00000423161 ATP7BP35670 1465 aa26.87■■□□□ 1.89
SREBF1-206ENST00000423161 CRYBG1Q9Y4K1 1723 aa26.86■■□□□ 1.89
SREBF1-206ENST00000423161 NGDNQ8NEJ9 315 aaKnown RBP26.84■■□□□ 1.89
SREBF1-206ENST00000423161 NRAPQ86VF7 1730 aa26.84■■□□□ 1.89
SREBF1-206ENST00000423161 TOPAZ1Q8N9V7 1692 aa26.83■■□□□ 1.89
SREBF1-206ENST00000423161 VPS72Q15906 364 aa26.82■■□□□ 1.88
SREBF1-206ENST00000423161 COL14A1Q05707 1796 aaKnown RBP26.81■■□□□ 1.88
SREBF1-206ENST00000423161 FAM83GA6ND36 823 aa26.8■■□□□ 1.88
SREBF1-206ENST00000423161 NUDT16Q96DE0 195 aaKnown RBP26.8■■□□□ 1.88
SREBF1-206ENST00000423161 CCDC9Q9Y3X0 531 aaKnown RBP26.79■■□□□ 1.88
SREBF1-206ENST00000423161 PAK3O75914 559 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms