RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 DLC1Q96QB1 1528 aa30.84■■■□□ 2.53
LSM8-203ENST00000422760 PRAM1Q96QH2 718 aa30.84■■■□□ 2.53
LSM8-203ENST00000422760 SLC12A5Q9H2X9 1139 aa30.83■■■□□ 2.53
LSM8-203ENST00000422760 NLRP1Q9C000 1473 aa30.83■■■□□ 2.53
LSM8-203ENST00000422760 USP32Q8NFA0 1604 aa30.83■■■□□ 2.53
LSM8-203ENST00000422760 NSD3Q9BZ95 1437 aa30.82■■■□□ 2.52
LSM8-203ENST00000422760 TMEM2Q9UHN6 1383 aa30.8■■■□□ 2.52
LSM8-203ENST00000422760 POGKQ9P215 609 aa30.79■■■□□ 2.52
LSM8-203ENST00000422760 CEBPAP49715 358 aaPredicted RBP30.79■■■□□ 2.52
LSM8-203ENST00000422760 CABP2Q9NPB3 220 aa30.78■■■□□ 2.52
LSM8-203ENST00000422760 MINK1Q8N4C8 1332 aaPredicted RBP30.76■■■□□ 2.52
LSM8-203ENST00000422760 BLMP54132 1417 aaPredicted RBP30.76■■■□□ 2.52
LSM8-203ENST00000422760 ANP32EQ9BTT0 268 aa30.76■■■□□ 2.51
LSM8-203ENST00000422760 SENP3-EIF4A1A0A087X0R7 540 aa30.75■■■□□ 2.51
LSM8-203ENST00000422760 HDGFP51858 240 aaKnown RBP30.75■■■□□ 2.51
LSM8-203ENST00000422760 ANKRD36BQ8N2N9 1353 aa30.75■■■□□ 2.51
LSM8-203ENST00000422760 IRX6P78412 446 aaPredicted RBP30.74■■■□□ 2.51
LSM8-203ENST00000422760 KNDC1Q76NI1 1749 aa30.74■■■□□ 2.51
LSM8-203ENST00000422760 ABCC11Q96J66 1382 aa30.73■■■□□ 2.51
LSM8-203ENST00000422760 NINLQ9Y2I6 1382 aa30.73■■■□□ 2.51
LSM8-203ENST00000422760 METP08581 1390 aa30.73■■■□□ 2.51
LSM8-203ENST00000422760 SRPK2P78362 688 aaKnown RBP30.73■■■□□ 2.51
LSM8-203ENST00000422760 FANCIQ9NVI1 1328 aa30.72■■■□□ 2.51
LSM8-203ENST00000422760 ATAD2Q6PL18 1390 aa30.71■■■□□ 2.51
LSM8-203ENST00000422760 PDE3BQ13370 1112 aa30.69■■■□□ 2.5
LSM8-203ENST00000422760 PLEKHH1Q9ULM0 1364 aa30.68■■■□□ 2.5
LSM8-203ENST00000422760 TECPR2O15040 1411 aa30.66■■■□□ 2.5
LSM8-203ENST00000422760 CPS1P31327 1500 aa30.66■■■□□ 2.5
LSM8-203ENST00000422760 A0A1W2PP64 1363 aa30.65■■■□□ 2.5
LSM8-203ENST00000422760 CGNL1Q0VF96 1302 aa30.65■■■□□ 2.5
LSM8-203ENST00000422760 WAPLQ7Z5K2 1190 aa30.65■■■□□ 2.5
LSM8-203ENST00000422760 ADAMTS13Q76LX8 1427 aa30.64■■■□□ 2.5
LSM8-203ENST00000422760 PLPPR3Q6T4P5 718 aa30.64■■■□□ 2.5
LSM8-203ENST00000422760 SLIT1O75093 1534 aa30.64■■■□□ 2.5
LSM8-203ENST00000422760 PLEKHG1Q9ULL1 1385 aa30.63■■■□□ 2.49
LSM8-203ENST00000422760 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
LSM8-203ENST00000422760 WDR43Q15061 677 aaKnown RBP eCLIP30.62■■■□□ 2.49
LSM8-203ENST00000422760 CDK19Q9BWU1 502 aa30.62■■■□□ 2.49
LSM8-203ENST00000422760 ADAMTS8Q9UP79 889 aa30.62■■■□□ 2.49
LSM8-203ENST00000422760 CD163L1Q9NR16 1453 aa30.61■■■□□ 2.49
LSM8-203ENST00000422760 ARHGAP23Q9P227 1491 aa30.61■■■□□ 2.49
LSM8-203ENST00000422760 NSD2O96028 1365 aa30.61■■■□□ 2.49
LSM8-203ENST00000422760 LTKP29376 864 aa30.61■■■□□ 2.49
LSM8-203ENST00000422760 RIMS1Q86UR5 1692 aaKnown RBP30.6■■■□□ 2.49
LSM8-203ENST00000422760 FAM135BQ49AJ0 1406 aa30.6■■■□□ 2.49
LSM8-203ENST00000422760 MORC1Q86VD1 984 aa30.6■■■□□ 2.49
LSM8-203ENST00000422760 SALL2Q9Y467 1007 aaPredicted RBP30.56■■■□□ 2.48
LSM8-203ENST00000422760 TXNDC2Q86VQ3 553 aa30.55■■■□□ 2.48
LSM8-203ENST00000422760 POLR3AO14802 1390 aaPredicted RBP30.55■■■□□ 2.48
LSM8-203ENST00000422760 TERF2IPQ9NYB0 399 aa30.55■■■□□ 2.48
LSM8-203ENST00000422760 MED14O60244 1454 aa30.54■■■□□ 2.48
LSM8-203ENST00000422760 ANKRD26Q9UPS8 1709 aa30.54■■■□□ 2.48
LSM8-203ENST00000422760 EID1Q9Y6B2 187 aa30.53■■■□□ 2.48
LSM8-203ENST00000422760 SIRT1Q96EB6 747 aa30.53■■■□□ 2.48
LSM8-203ENST00000422760 SHPRHQ149N8 1683 aa30.52■■■□□ 2.48
LSM8-203ENST00000422760 TNNT2P45379 298 aaPredicted RBP30.51■■■□□ 2.48
LSM8-203ENST00000422760 B4GALNT3Q6L9W6 998 aa30.51■■■□□ 2.48
LSM8-203ENST00000422760 CEP170BQ9Y4F5 1589 aaPredicted RBP30.51■■■□□ 2.47
LSM8-203ENST00000422760 ATP7BP35670 1465 aa30.5■■■□□ 2.47
LSM8-203ENST00000422760 ROBO2Q9HCK4 1378 aa30.49■■■□□ 2.47
LSM8-203ENST00000422760 KIF20BQ96Q89 1820 aa30.49■■■□□ 2.47
LSM8-203ENST00000422760 CABP1Q9NZU7 370 aa30.49■■■□□ 2.47
LSM8-203ENST00000422760 ADAMTSL3P82987 1691 aa30.49■■■□□ 2.47
LSM8-203ENST00000422760 WASLO00401 505 aaPredicted RBP30.47■■■□□ 2.47
LSM8-203ENST00000422760 THEMISQ8N1K5 641 aaPredicted RBP30.47■■■□□ 2.47
LSM8-203ENST00000422760 HDGFL2Q7Z4V5 671 aaPredicted RBP30.47■■■□□ 2.47
LSM8-203ENST00000422760 ADGRB2O60241 1585 aa30.45■■■□□ 2.47
LSM8-203ENST00000422760 DIP2AQ14689 1571 aa30.44■■■□□ 2.46
LSM8-203ENST00000422760 SLC26A8Q96RN1 970 aa30.44■■■□□ 2.46
LSM8-203ENST00000422760 PTPRUQ92729 1446 aa30.44■■■□□ 2.46
LSM8-203ENST00000422760 CCDC136Q96JN2 1154 aa30.43■■■□□ 2.46
LSM8-203ENST00000422760 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.43■■■□□ 2.46
LSM8-203ENST00000422760 PPIP5K1Q6PFW1 1433 aa30.42■■■□□ 2.46
LSM8-203ENST00000422760 ZNF142P52746 1687 aaPredicted RBP30.41■■■□□ 2.46
LSM8-203ENST00000422760 GGNBP2Q9H3C7 697 aa30.41■■■□□ 2.46
LSM8-203ENST00000422760 MTHFSP49914 203 aa30.4■■■□□ 2.46
LSM8-203ENST00000422760 FYB1O15117 783 aa30.39■■■□□ 2.46
LSM8-203ENST00000422760 CCDC146Q8IYE0 955 aa30.39■■■□□ 2.46
LSM8-203ENST00000422760 CDCA7LQ96GN5 454 aa30.39■■■□□ 2.46
LSM8-203ENST00000422760 CDC42BPGQ6DT37 1551 aa30.39■■■□□ 2.45
LSM8-203ENST00000422760 RRP1P56182 461 aaKnown RBP30.38■■■□□ 2.45
LSM8-203ENST00000422760 RCAN3Q9UKA8 241 aa30.37■■■□□ 2.45
LSM8-203ENST00000422760 CPSF1Q10570 1443 aaKnown RBP30.37■■■□□ 2.45
LSM8-203ENST00000422760 TBX22Q9Y458 520 aa30.37■■■□□ 2.45
LSM8-203ENST00000422760 MON2Q7Z3U7 1717 aa30.36■■■□□ 2.45
LSM8-203ENST00000422760 ITSN1Q15811 1721 aa30.35■■■□□ 2.45
LSM8-203ENST00000422760 NUDT16Q96DE0 195 aaKnown RBP30.35■■■□□ 2.45
LSM8-203ENST00000422760 CFAP53Q96M91 514 aa30.35■■■□□ 2.45
LSM8-203ENST00000422760 PTCH1Q13635 1447 aa30.34■■■□□ 2.45
LSM8-203ENST00000422760 AKAP12Q02952 1782 aa30.34■■■□□ 2.45
LSM8-203ENST00000422760 XRN1Q8IZH2 1706 aaKnown RBP30.34■■■□□ 2.45
LSM8-203ENST00000422760 ZNF521Q96K83 1311 aa30.34■■■□□ 2.45
LSM8-203ENST00000422760 TOPAZ1Q8N9V7 1692 aa30.33■■■□□ 2.45
LSM8-203ENST00000422760 EDC4Q6P2E9 1401 aaKnown RBP30.32■■■□□ 2.44
LSM8-203ENST00000422760 CCDC61Q9Y6R9 512 aa30.32■■■□□ 2.44
LSM8-203ENST00000422760 AMOTL2Q9Y2J4 779 aa30.31■■■□□ 2.44
LSM8-203ENST00000422760 PRR36Q9H6K5 1346 aa30.31■■■□□ 2.44
LSM8-203ENST00000422760 APAF1O14727 1248 aa30.3■■■□□ 2.44
LSM8-203ENST00000422760 NCKAP5LQ9HCH0 1330 aa30.29■■■□□ 2.44
LSM8-203ENST00000422760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms