RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
NDUFA3-208ENST00000422029 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
NDUFA3-208ENST00000422029 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
NDUFA3-208ENST00000422029 FOXO3O43524 673 aa16.83■□□□□ 0.28
NDUFA3-208ENST00000422029 QTRT2Q9H974 415 aaKnown RBP16.83■□□□□ 0.28
NDUFA3-208ENST00000422029 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
NDUFA3-208ENST00000422029 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
NDUFA3-208ENST00000422029 SOS2Q07890 1332 aaPredicted RBP16.8■□□□□ 0.28
NDUFA3-208ENST00000422029 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
NDUFA3-208ENST00000422029 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
NDUFA3-208ENST00000422029 LRPPRCP42704 1394 aaKnown RBP16.78■□□□□ 0.28
NDUFA3-208ENST00000422029 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
NDUFA3-208ENST00000422029 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
NDUFA3-208ENST00000422029 USP21Q9UK80 565 aa16.76■□□□□ 0.27
NDUFA3-208ENST00000422029 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
NDUFA3-208ENST00000422029 PIK3C2GO75747 1445 aa16.75■□□□□ 0.27
NDUFA3-208ENST00000422029 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
NDUFA3-208ENST00000422029 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
NDUFA3-208ENST00000422029 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-208ENST00000422029 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
NDUFA3-208ENST00000422029 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-208ENST00000422029 PRAM1Q96QH2 718 aa16.73■□□□□ 0.27
NDUFA3-208ENST00000422029 RGS12O14924 1447 aa16.72■□□□□ 0.27
NDUFA3-208ENST00000422029 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
NDUFA3-208ENST00000422029 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
NDUFA3-208ENST00000422029 CABLES1Q8TDN4 633 aa16.71■□□□□ 0.27
NDUFA3-208ENST00000422029 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
NDUFA3-208ENST00000422029 POGKQ9P215 609 aa16.71■□□□□ 0.27
NDUFA3-208ENST00000422029 TECPR2O15040 1411 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 LAMC1P11047 1609 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 PXDNQ92626 1479 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
NDUFA3-208ENST00000422029 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
NDUFA3-208ENST00000422029 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
NDUFA3-208ENST00000422029 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
NDUFA3-208ENST00000422029 MINK1Q8N4C8 1332 aaPredicted RBP16.68■□□□□ 0.26
NDUFA3-208ENST00000422029 TRPC5Q9UL62 973 aaPredicted RBP16.67■□□□□ 0.26
NDUFA3-208ENST00000422029 PHF8Q9UPP1 1060 aa16.67■□□□□ 0.26
NDUFA3-208ENST00000422029 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
NDUFA3-208ENST00000422029 FMN2Q9NZ56 1722 aa16.66■□□□□ 0.26
NDUFA3-208ENST00000422029 KNDC1Q76NI1 1749 aa16.65■□□□□ 0.26
NDUFA3-208ENST00000422029 HAP1P54257 671 aaPredicted RBP16.65■□□□□ 0.26
NDUFA3-208ENST00000422029 MYOM2P54296 1465 aa16.65■□□□□ 0.26
NDUFA3-208ENST00000422029 CDK12Q9NYV4 1490 aaPredicted RBP16.65■□□□□ 0.26
NDUFA3-208ENST00000422029 SPATA31A3Q5VYP0 1347 aa16.65■□□□□ 0.26
NDUFA3-208ENST00000422029 PSME1Q06323 249 aa16.64■□□□□ 0.25
NDUFA3-208ENST00000422029 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
NDUFA3-208ENST00000422029 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
NDUFA3-208ENST00000422029 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
NDUFA3-208ENST00000422029 BCL9LQ86UU0 1499 aa16.62■□□□□ 0.25
NDUFA3-208ENST00000422029 ATRNO75882 1429 aa16.62■□□□□ 0.25
NDUFA3-208ENST00000422029 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
NDUFA3-208ENST00000422029 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
NDUFA3-208ENST00000422029 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
NDUFA3-208ENST00000422029 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
NDUFA3-208ENST00000422029 KIF1AQ12756 1690 aa16.57■□□□□ 0.24
NDUFA3-208ENST00000422029 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
NDUFA3-208ENST00000422029 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
NDUFA3-208ENST00000422029 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
NDUFA3-208ENST00000422029 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
NDUFA3-208ENST00000422029 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
NDUFA3-208ENST00000422029 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
NDUFA3-208ENST00000422029 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
NDUFA3-208ENST00000422029 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
NDUFA3-208ENST00000422029 WASLO00401 505 aaPredicted RBP16.54■□□□□ 0.24
NDUFA3-208ENST00000422029 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
NDUFA3-208ENST00000422029 DLC1Q96QB1 1528 aa16.54■□□□□ 0.24
NDUFA3-208ENST00000422029 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
NDUFA3-208ENST00000422029 SLIT2O94813 1529 aa16.52■□□□□ 0.24
NDUFA3-208ENST00000422029 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
NDUFA3-208ENST00000422029 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
NDUFA3-208ENST00000422029 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 GLI3P10071 1580 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 A0A0G2JS52 829 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 MYT1Q01538 1121 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
NDUFA3-208ENST00000422029 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
NDUFA3-208ENST00000422029 HRCP23327 699 aa16.49■□□□□ 0.23
NDUFA3-208ENST00000422029 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
NDUFA3-208ENST00000422029 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
NDUFA3-208ENST00000422029 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
NDUFA3-208ENST00000422029 VPS72Q15906 364 aa16.48■□□□□ 0.23
NDUFA3-208ENST00000422029 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
NDUFA3-208ENST00000422029 FAM182BQ5T319 152 aa16.47■□□□□ 0.23
NDUFA3-208ENST00000422029 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
NDUFA3-208ENST00000422029 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
NDUFA3-208ENST00000422029 TULP4Q9NRJ4 1543 aa16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 ABCA3Q99758 1704 aa16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 SIN3AQ96ST3 1273 aa16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
NDUFA3-208ENST00000422029 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
NDUFA3-208ENST00000422029 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
NDUFA3-208ENST00000422029 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
NDUFA3-208ENST00000422029 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms