RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 PRAM1Q96QH2 718 aa18.27■□□□□ 0.52
TMEM50B-201ENST00000420455 STK26Q9P289 416 aa18.25■□□□□ 0.51
TMEM50B-201ENST00000420455 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
TMEM50B-201ENST00000420455 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
TMEM50B-201ENST00000420455 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
TMEM50B-201ENST00000420455 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
TMEM50B-201ENST00000420455 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
TMEM50B-201ENST00000420455 PLEKHH1Q9ULM0 1364 aa18.23■□□□□ 0.51
TMEM50B-201ENST00000420455 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
TMEM50B-201ENST00000420455 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
TMEM50B-201ENST00000420455 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
TMEM50B-201ENST00000420455 ATAD2Q6PL18 1390 aa18.22■□□□□ 0.51
TMEM50B-201ENST00000420455 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
TMEM50B-201ENST00000420455 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
TMEM50B-201ENST00000420455 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
TMEM50B-201ENST00000420455 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
TMEM50B-201ENST00000420455 INSRP06213 1382 aa18.21■□□□□ 0.51
TMEM50B-201ENST00000420455 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
TMEM50B-201ENST00000420455 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
TMEM50B-201ENST00000420455 PIK3R4Q99570 1358 aa18.2■□□□□ 0.5
TMEM50B-201ENST00000420455 POGKQ9P215 609 aa18.2■□□□□ 0.5
TMEM50B-201ENST00000420455 ROBO2Q9HCK4 1378 aa18.19■□□□□ 0.5
TMEM50B-201ENST00000420455 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
TMEM50B-201ENST00000420455 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 TOPAZ1Q8N9V7 1692 aa18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 MINK1Q8N4C8 1332 aaPredicted RBP18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
TMEM50B-201ENST00000420455 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-201ENST00000420455 ATP7BP35670 1465 aa18.16■□□□□ 0.5
TMEM50B-201ENST00000420455 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-201ENST00000420455 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
TMEM50B-201ENST00000420455 NSD2O96028 1365 aa18.15■□□□□ 0.5
TMEM50B-201ENST00000420455 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.5
TMEM50B-201ENST00000420455 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.5
TMEM50B-201ENST00000420455 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
TMEM50B-201ENST00000420455 TMC1Q8TDI8 760 aa18.13■□□□□ 0.49
TMEM50B-201ENST00000420455 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-201ENST00000420455 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
TMEM50B-201ENST00000420455 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
TMEM50B-201ENST00000420455 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
TMEM50B-201ENST00000420455 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
TMEM50B-201ENST00000420455 SUPT16HQ9Y5B9 1047 aaKnown RBP18.12■□□□□ 0.49
TMEM50B-201ENST00000420455 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
TMEM50B-201ENST00000420455 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
TMEM50B-201ENST00000420455 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
TMEM50B-201ENST00000420455 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
TMEM50B-201ENST00000420455 KIF20BQ96Q89 1820 aa18.1■□□□□ 0.49
TMEM50B-201ENST00000420455 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
TMEM50B-201ENST00000420455 ANKLE2Q86XL3 938 aa18.1■□□□□ 0.49
TMEM50B-201ENST00000420455 SLC26A8Q96RN1 970 aa18.1■□□□□ 0.49
TMEM50B-201ENST00000420455 ZBED9Q6R2W3 1325 aa18.09■□□□□ 0.49
TMEM50B-201ENST00000420455 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
TMEM50B-201ENST00000420455 BCANQ96GW7 911 aa18.08■□□□□ 0.49
TMEM50B-201ENST00000420455 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.49
TMEM50B-201ENST00000420455 NWD1Q149M9 1564 aa18.08■□□□□ 0.49
TMEM50B-201ENST00000420455 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
TMEM50B-201ENST00000420455 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
TMEM50B-201ENST00000420455 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
TMEM50B-201ENST00000420455 ITSN1Q15811 1721 aa18.06■□□□□ 0.48
TMEM50B-201ENST00000420455 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
TMEM50B-201ENST00000420455 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
TMEM50B-201ENST00000420455 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
TMEM50B-201ENST00000420455 SHPRHQ149N8 1683 aa18.04■□□□□ 0.48
TMEM50B-201ENST00000420455 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
TMEM50B-201ENST00000420455 FMN2Q9NZ56 1722 aa18.04■□□□□ 0.48
TMEM50B-201ENST00000420455 PRR36Q9H6K5 1346 aa18.03■□□□□ 0.48
TMEM50B-201ENST00000420455 NUDT16Q96DE0 195 aaKnown RBP18.02■□□□□ 0.48
TMEM50B-201ENST00000420455 EDC4Q6P2E9 1401 aaKnown RBP18.02■□□□□ 0.48
TMEM50B-201ENST00000420455 NALCNQ8IZF0 1738 aa18.02■□□□□ 0.47
TMEM50B-201ENST00000420455 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
TMEM50B-201ENST00000420455 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
TMEM50B-201ENST00000420455 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
TMEM50B-201ENST00000420455 FYB1O15117 783 aa17.99■□□□□ 0.47
TMEM50B-201ENST00000420455 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
TMEM50B-201ENST00000420455 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-201ENST00000420455 KCNA6P17658 529 aa17.98■□□□□ 0.47
TMEM50B-201ENST00000420455 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
TMEM50B-201ENST00000420455 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
TMEM50B-201ENST00000420455 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
TMEM50B-201ENST00000420455 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
TMEM50B-201ENST00000420455 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
TMEM50B-201ENST00000420455 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
TMEM50B-201ENST00000420455 USP54Q70EL1 1684 aa17.94■□□□□ 0.46
TMEM50B-201ENST00000420455 FKBP8Q14318 412 aa17.93■□□□□ 0.46
TMEM50B-201ENST00000420455 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
TMEM50B-201ENST00000420455 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
TMEM50B-201ENST00000420455 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
TMEM50B-201ENST00000420455 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
TMEM50B-201ENST00000420455 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
TMEM50B-201ENST00000420455 PNPLA6Q8IY17 1366 aa17.92■□□□□ 0.46
TMEM50B-201ENST00000420455 USP6P35125 1406 aa17.92■□□□□ 0.46
TMEM50B-201ENST00000420455 AATKQ6ZMQ8 1374 aa17.9■□□□□ 0.46
TMEM50B-201ENST00000420455 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
TMEM50B-201ENST00000420455 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
TMEM50B-201ENST00000420455 STRCQ7RTU9 1775 aa17.89■□□□□ 0.46
TMEM50B-201ENST00000420455 MTHFSP49914 203 aa17.88■□□□□ 0.45
TMEM50B-201ENST00000420455 ACEP12821 1306 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms