RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 RLBP1P12271 317 aa19.44■□□□□ 0.7
SEMA3B-203ENST00000419007 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-203ENST00000419007 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-203ENST00000419007 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-203ENST00000419007 BECN1Q14457 450 aa19.43■□□□□ 0.7
SEMA3B-203ENST00000419007 USP19O94966 1318 aa19.43■□□□□ 0.7
SEMA3B-203ENST00000419007 PCDHB15Q9Y5E8 787 aa19.43■□□□□ 0.7
SEMA3B-203ENST00000419007 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-203ENST00000419007 TET3O43151 1660 aa19.42■□□□□ 0.7
SEMA3B-203ENST00000419007 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-203ENST00000419007 NOS1P29475 1434 aa19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 U2AF1L5P0DN76 240 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 U2AF1Q01081 240 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 GGT6Q6P531 493 aa19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 CFAP53Q96M91 514 aa19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
SEMA3B-203ENST00000419007 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
SEMA3B-203ENST00000419007 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
SEMA3B-203ENST00000419007 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
SEMA3B-203ENST00000419007 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
SEMA3B-203ENST00000419007 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
SEMA3B-203ENST00000419007 NINLQ9Y2I6 1382 aa19.39■□□□□ 0.69
SEMA3B-203ENST00000419007 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
SEMA3B-203ENST00000419007 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-203ENST00000419007 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
SEMA3B-203ENST00000419007 ARXQ96QS3 562 aa19.36■□□□□ 0.69
SEMA3B-203ENST00000419007 POGKQ9P215 609 aa19.36■□□□□ 0.69
SEMA3B-203ENST00000419007 RWDD1Q9H446 243 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-203ENST00000419007 MYOM2P54296 1465 aa19.35■□□□□ 0.69
SEMA3B-203ENST00000419007 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
SEMA3B-203ENST00000419007 WDR63Q8IWG1 891 aa19.35■□□□□ 0.69
SEMA3B-203ENST00000419007 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
SEMA3B-203ENST00000419007 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
SEMA3B-203ENST00000419007 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
SEMA3B-203ENST00000419007 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
SEMA3B-203ENST00000419007 KIF1BO60333 1816 aa19.33■□□□□ 0.68
SEMA3B-203ENST00000419007 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
SEMA3B-203ENST00000419007 C14orf93Q9H972 538 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-203ENST00000419007 SBNO2Q9Y2G9 1366 aa19.31■□□□□ 0.68
SEMA3B-203ENST00000419007 SMC4Q9NTJ3 1288 aa19.31■□□□□ 0.68
SEMA3B-203ENST00000419007 ABCA9Q8IUA7 1624 aa19.31■□□□□ 0.68
SEMA3B-203ENST00000419007 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
SEMA3B-203ENST00000419007 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
SEMA3B-203ENST00000419007 DZIP1LQ8IYY4 767 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 STK26Q9P289 416 aa19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 MVPQ14764 893 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
SEMA3B-203ENST00000419007 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-203ENST00000419007 ITPRIPQ8IWB1 547 aa19.28■□□□□ 0.68
SEMA3B-203ENST00000419007 INO80Q9ULG1 1556 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-203ENST00000419007 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-203ENST00000419007 EVC2Q86UK5 1308 aa19.27■□□□□ 0.68
SEMA3B-203ENST00000419007 MROH2AA6NES4 1674 aa19.27■□□□□ 0.68
SEMA3B-203ENST00000419007 EXOSC9Q06265 439 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-203ENST00000419007 EFCAB6Q5THR3 1501 aa19.27■□□□□ 0.68
SEMA3B-203ENST00000419007 AAMPQ13685 434 aa19.27■□□□□ 0.67
SEMA3B-203ENST00000419007 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.67
SEMA3B-203ENST00000419007 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-203ENST00000419007 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-203ENST00000419007 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
SEMA3B-203ENST00000419007 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
SEMA3B-203ENST00000419007 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
SEMA3B-203ENST00000419007 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
SEMA3B-203ENST00000419007 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
SEMA3B-203ENST00000419007 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
SEMA3B-203ENST00000419007 PPRC1Q5VV67 1664 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-203ENST00000419007 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
SEMA3B-203ENST00000419007 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-203ENST00000419007 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-203ENST00000419007 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
SEMA3B-203ENST00000419007 TRIM27P14373 513 aa19.22■□□□□ 0.67
SEMA3B-203ENST00000419007 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
SEMA3B-203ENST00000419007 ANTXR1Q9H6X2 564 aa19.22■□□□□ 0.67
SEMA3B-203ENST00000419007 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
SEMA3B-203ENST00000419007 NPATQ14207 1427 aa19.21■□□□□ 0.67
SEMA3B-203ENST00000419007 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
SEMA3B-203ENST00000419007 QRICH2Q9H0J4 1663 aa19.21■□□□□ 0.67
SEMA3B-203ENST00000419007 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-203ENST00000419007 NOB1Q9ULX3 412 aaKnown RBP19.2■□□□□ 0.66
SEMA3B-203ENST00000419007 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
SEMA3B-203ENST00000419007 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
SEMA3B-203ENST00000419007 ANKRD36BQ8N2N9 1353 aa19.19■□□□□ 0.66
SEMA3B-203ENST00000419007 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
SEMA3B-203ENST00000419007 IFT172Q9UG01 1749 aa19.18■□□□□ 0.66
SEMA3B-203ENST00000419007 MLECQ14165 292 aa19.18■□□□□ 0.66
SEMA3B-203ENST00000419007 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
SEMA3B-203ENST00000419007 RIPK4P57078 832 aa19.18■□□□□ 0.66
SEMA3B-203ENST00000419007 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
SEMA3B-203ENST00000419007 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
SEMA3B-203ENST00000419007 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-203ENST00000419007 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
SEMA3B-203ENST00000419007 SETBP1Q9Y6X0 1596 aa19.16■□□□□ 0.66
SEMA3B-203ENST00000419007 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
SEMA3B-203ENST00000419007 DIP2BQ9P265 1576 aa19.16■□□□□ 0.66
SEMA3B-203ENST00000419007 RPGRIP1LQ68CZ1 1315 aa19.15■□□□□ 0.66
SEMA3B-203ENST00000419007 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
SEMA3B-203ENST00000419007 ADGRB1O14514 1584 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms