RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ARHGAP23Q9P227 1491 aa9.81□□□□□ -0.84
CPS1-202ENST00000417946 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
CPS1-202ENST00000417946 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
CPS1-202ENST00000417946 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
CPS1-202ENST00000417946 ADGRF5Q8IZF2 1346 aa9.81□□□□□ -0.84
CPS1-202ENST00000417946 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
CPS1-202ENST00000417946 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
CPS1-202ENST00000417946 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
CPS1-202ENST00000417946 SETD1BQ9UPS6 1966 aaKnown RBP9.8□□□□□ -0.84
CPS1-202ENST00000417946 SLIT1O75093 1534 aa9.8□□□□□ -0.84
CPS1-202ENST00000417946 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
CPS1-202ENST00000417946 KDM2AQ9Y2K7 1162 aa9.79□□□□□ -0.84
CPS1-202ENST00000417946 SETBP1Q9Y6X0 1596 aa9.79□□□□□ -0.84
CPS1-202ENST00000417946 RPGRIP1LQ68CZ1 1315 aa9.79□□□□□ -0.84
CPS1-202ENST00000417946 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
CPS1-202ENST00000417946 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
CPS1-202ENST00000417946 MAP3K13O43283 966 aa9.77□□□□□ -0.85
CPS1-202ENST00000417946 TIE1P35590 1138 aa9.77□□□□□ -0.85
CPS1-202ENST00000417946 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
CPS1-202ENST00000417946 TMEM2Q9UHN6 1383 aa9.76□□□□□ -0.85
CPS1-202ENST00000417946 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
CPS1-202ENST00000417946 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
CPS1-202ENST00000417946 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
CPS1-202ENST00000417946 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
CPS1-202ENST00000417946 ALKQ9UM73 1620 aa9.75□□□□□ -0.85
CPS1-202ENST00000417946 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
CPS1-202ENST00000417946 MED14O60244 1454 aa9.74□□□□□ -0.85
CPS1-202ENST00000417946 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
CPS1-202ENST00000417946 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
CPS1-202ENST00000417946 PCDHB13Q9Y5F0 798 aa9.74□□□□□ -0.85
CPS1-202ENST00000417946 ROCK2O75116 1388 aaKnown RBP9.74□□□□□ -0.85
CPS1-202ENST00000417946 USP47Q96K76 1375 aa9.74□□□□□ -0.85
CPS1-202ENST00000417946 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
CPS1-202ENST00000417946 HSPA5P11021 654 aaKnown RBP9.73□□□□□ -0.85
CPS1-202ENST00000417946 CFAP70Q5T0N1 1121 aa9.73□□□□□ -0.85
CPS1-202ENST00000417946 C14orf93Q9H972 538 aaKnown RBP9.73□□□□□ -0.85
CPS1-202ENST00000417946 SCUBE2Q9NQ36 999 aa9.73□□□□□ -0.85
CPS1-202ENST00000417946 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
CPS1-202ENST00000417946 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
CPS1-202ENST00000417946 OTUD5Q96G74 571 aa9.72□□□□□ -0.85
CPS1-202ENST00000417946 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
CPS1-202ENST00000417946 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
CPS1-202ENST00000417946 SEC24BO95487 1268 aa9.71□□□□□ -0.86
CPS1-202ENST00000417946 LTKP29376 864 aa9.71□□□□□ -0.86
CPS1-202ENST00000417946 NUBP1P53384 320 aa9.71□□□□□ -0.86
CPS1-202ENST00000417946 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
CPS1-202ENST00000417946 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
CPS1-202ENST00000417946 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
CPS1-202ENST00000417946 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
CPS1-202ENST00000417946 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
CPS1-202ENST00000417946 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
CPS1-202ENST00000417946 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
CPS1-202ENST00000417946 LMTK3Q96Q04 1460 aa9.7□□□□□ -0.86
CPS1-202ENST00000417946 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
CPS1-202ENST00000417946 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
CPS1-202ENST00000417946 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
CPS1-202ENST00000417946 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
CPS1-202ENST00000417946 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
CPS1-202ENST00000417946 DLC1Q96QB1 1528 aa9.68□□□□□ -0.86
CPS1-202ENST00000417946 METP08581 1390 aa9.68□□□□□ -0.86
CPS1-202ENST00000417946 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
CPS1-202ENST00000417946 TESK2Q96S53 571 aa9.68□□□□□ -0.86
CPS1-202ENST00000417946 CPS1P31327 1500 aa9.67□□□□□ -0.86
CPS1-202ENST00000417946 TECPR2O15040 1411 aa9.67□□□□□ -0.86
CPS1-202ENST00000417946 YTHDC2Q9H6S0 1430 aaKnown RBP9.67□□□□□ -0.86
CPS1-202ENST00000417946 POTEB2H3BUK9 544 aa9.67□□□□□ -0.86
CPS1-202ENST00000417946 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
CPS1-202ENST00000417946 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPS1-202ENST00000417946 MYOM1P52179 1685 aa9.66□□□□□ -0.86
CPS1-202ENST00000417946 LRPPRCP42704 1394 aaKnown RBP9.65□□□□□ -0.86
CPS1-202ENST00000417946 CCDC7Q96M83 1385 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 IER5LQ5T953 404 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 TULP4Q9NRJ4 1543 aa9.65□□□□□ -0.86
CPS1-202ENST00000417946 SBNO2Q9Y2G9 1366 aa9.64□□□□□ -0.87
CPS1-202ENST00000417946 KIF7Q2M1P5 1343 aa9.64□□□□□ -0.87
CPS1-202ENST00000417946 CHD2O14647 1828 aaKnown RBP9.64□□□□□ -0.87
CPS1-202ENST00000417946 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
CPS1-202ENST00000417946 GSE1Q14687 1217 aa9.63□□□□□ -0.87
CPS1-202ENST00000417946 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
CPS1-202ENST00000417946 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
CPS1-202ENST00000417946 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
CPS1-202ENST00000417946 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
CPS1-202ENST00000417946 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CPS1-202ENST00000417946 TRPC6Q9Y210 931 aa9.62□□□□□ -0.87
CPS1-202ENST00000417946 STRCP1A6NGW2 1772 aa9.62□□□□□ -0.87
CPS1-202ENST00000417946 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
CPS1-202ENST00000417946 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
CPS1-202ENST00000417946 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
CPS1-202ENST00000417946 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
CPS1-202ENST00000417946 ADGRB2O60241 1585 aa9.61□□□□□ -0.87
CPS1-202ENST00000417946 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
CPS1-202ENST00000417946 PTCH1Q13635 1447 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms