RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 MS4A1P11836 297 aa10.12□□□□□ -0.79
XIST-202ENST00000417942 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
XIST-202ENST00000417942 PDE4DQ08499 809 aa10.11□□□□□ -0.79
XIST-202ENST00000417942 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
XIST-202ENST00000417942 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
XIST-202ENST00000417942 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
XIST-202ENST00000417942 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
XIST-202ENST00000417942 Q3C1V9 767 aa10.08□□□□□ -0.8
XIST-202ENST00000417942 BEGAINQ9BUH8 593 aa10.08□□□□□ -0.8
XIST-202ENST00000417942 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
XIST-202ENST00000417942 SLC19A1P41440 591 aa10.07□□□□□ -0.8
XIST-202ENST00000417942 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
XIST-202ENST00000417942 MOXD2PA6NHM9 499 aa10.06□□□□□ -0.8
XIST-202ENST00000417942 NDUFV2P19404 249 aa10.06□□□□□ -0.8
XIST-202ENST00000417942 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
XIST-202ENST00000417942 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
XIST-202ENST00000417942 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
XIST-202ENST00000417942 TRIM67Q6ZTA4 783 aa10.05□□□□□ -0.8
XIST-202ENST00000417942 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
XIST-202ENST00000417942 FDX1P10109 184 aa10.04□□□□□ -0.8
XIST-202ENST00000417942 MMP16P51512 607 aa10.04□□□□□ -0.8
XIST-202ENST00000417942 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
XIST-202ENST00000417942 DXOO77932 396 aaKnown RBP10.02□□□□□ -0.81
XIST-202ENST00000417942 ZNF598Q86UK7 904 aaKnown RBP10.01□□□□□ -0.81
XIST-202ENST00000417942 GFRA3O60609 400 aa10□□□□□ -0.81
XIST-202ENST00000417942 LCE2BO14633 110 aa9.99□□□□□ -0.81
XIST-202ENST00000417942 ZNF697Q5TEC3 545 aa9.99□□□□□ -0.81
XIST-202ENST00000417942 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
XIST-202ENST00000417942 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
XIST-202ENST00000417942 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
XIST-202ENST00000417942 SPTLC1O15269 473 aa9.97□□□□□ -0.81
XIST-202ENST00000417942 JUNDP17535 347 aa9.97□□□□□ -0.81
XIST-202ENST00000417942 RPIAP49247 311 aa9.97□□□□□ -0.81
XIST-202ENST00000417942 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
XIST-202ENST00000417942 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
XIST-202ENST00000417942 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
XIST-202ENST00000417942 GDF9O60383 454 aa9.96□□□□□ -0.82
XIST-202ENST00000417942 GJA5P36382 358 aa9.96□□□□□ -0.82
XIST-202ENST00000417942 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
XIST-202ENST00000417942 Q6ZNB5 142 aa9.96□□□□□ -0.82
XIST-202ENST00000417942 GPBP1L1Q9HC44 474 aaPredicted RBP9.96□□□□□ -0.82
XIST-202ENST00000417942 MYSM1Q5VVJ2 828 aa9.95□□□□□ -0.82
XIST-202ENST00000417942 PRR20EP86478 221 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 PRR20CP86479 221 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 PRR20DP86480 221 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 PRR20BP86481 221 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 PRR20AP86496 221 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 DIXDC1Q155Q3 683 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
XIST-202ENST00000417942 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
XIST-202ENST00000417942 NPM2Q86SE8 214 aaKnown RBP9.93□□□□□ -0.82
XIST-202ENST00000417942 MTMR2Q13614 643 aa9.92□□□□□ -0.82
XIST-202ENST00000417942 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
XIST-202ENST00000417942 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
XIST-202ENST00000417942 PRR7Q8TB68 274 aa9.91□□□□□ -0.82
XIST-202ENST00000417942 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
XIST-202ENST00000417942 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
XIST-202ENST00000417942 HRCP23327 699 aa9.9□□□□□ -0.82
XIST-202ENST00000417942 TRIM32Q13049 653 aa9.9□□□□□ -0.82
XIST-202ENST00000417942 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
XIST-202ENST00000417942 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
XIST-202ENST00000417942 CFAP99D6REC4 459 aa9.89□□□□□ -0.83
XIST-202ENST00000417942 CD2BP2O95400 341 aaKnown RBP9.89□□□□□ -0.83
XIST-202ENST00000417942 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
XIST-202ENST00000417942 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
XIST-202ENST00000417942 SPDYE5A6NIY4 337 aa9.88□□□□□ -0.83
XIST-202ENST00000417942 QPCTQ16769 361 aa9.88□□□□□ -0.83
XIST-202ENST00000417942 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
XIST-202ENST00000417942 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
XIST-202ENST00000417942 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
XIST-202ENST00000417942 ZBTB24O43167 697 aaPredicted RBP9.87□□□□□ -0.83
XIST-202ENST00000417942 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
XIST-202ENST00000417942 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
XIST-202ENST00000417942 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
XIST-202ENST00000417942 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
XIST-202ENST00000417942 PLEKHG3A1L390 1219 aa9.86□□□□□ -0.83
XIST-202ENST00000417942 SKOR1P84550 965 aa9.86□□□□□ -0.83
XIST-202ENST00000417942 FOXC1Q12948 553 aa9.86□□□□□ -0.83
XIST-202ENST00000417942 PTPRNQ16849 979 aa9.86□□□□□ -0.83
XIST-202ENST00000417942 LILRB3O75022 631 aa9.85□□□□□ -0.83
XIST-202ENST00000417942 CCNYL3P0C7X3 344 aa9.85□□□□□ -0.83
XIST-202ENST00000417942 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
XIST-202ENST00000417942 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
XIST-202ENST00000417942 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
XIST-202ENST00000417942 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
XIST-202ENST00000417942 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
XIST-202ENST00000417942 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
XIST-202ENST00000417942 TOR4AQ9NXH8 423 aa9.84□□□□□ -0.83
XIST-202ENST00000417942 WNT7AO00755 349 aa9.83□□□□□ -0.84
XIST-202ENST00000417942 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
XIST-202ENST00000417942 LYPD8Q6UX82 237 aa9.83□□□□□ -0.84
XIST-202ENST00000417942 RSPH6AQ9H0K4 717 aa9.82□□□□□ -0.84
XIST-202ENST00000417942 KCNH2Q12809 1159 aa9.81□□□□□ -0.84
XIST-202ENST00000417942 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
XIST-202ENST00000417942 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
XIST-202ENST00000417942 FAM187AA6NFU0 413 aa9.8□□□□□ -0.84
XIST-202ENST00000417942 DGAT1O75907 488 aa9.8□□□□□ -0.84
XIST-202ENST00000417942 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
XIST-202ENST00000417942 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms