RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 RAD21O60216 631 aa9.81□□□□□ -0.84
RFC4-204ENST00000417876 RNF40O75150 1001 aa9.81□□□□□ -0.84
RFC4-204ENST00000417876 USP17L8P0C7I0 530 aa9.81□□□□□ -0.84
RFC4-204ENST00000417876 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
RFC4-204ENST00000417876 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
RFC4-204ENST00000417876 GDPD2Q9HCC8 539 aa9.81□□□□□ -0.84
RFC4-204ENST00000417876 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
RFC4-204ENST00000417876 CFAP99D6REC4 459 aa9.79□□□□□ -0.84
RFC4-204ENST00000417876 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
RFC4-204ENST00000417876 MTMR2Q13614 643 aa9.79□□□□□ -0.84
RFC4-204ENST00000417876 GJD4Q96KN9 370 aaPredicted RBP9.79□□□□□ -0.84
RFC4-204ENST00000417876 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
RFC4-204ENST00000417876 HMX1Q9NP08 348 aaPredicted RBP9.78□□□□□ -0.84
RFC4-204ENST00000417876 TBC1D2BQ9UPU7 963 aa9.78□□□□□ -0.84
RFC4-204ENST00000417876 SOCS7O14512 581 aa9.77□□□□□ -0.85
RFC4-204ENST00000417876 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
RFC4-204ENST00000417876 PUS10Q3MIT2 529 aaKnown RBP9.77□□□□□ -0.85
RFC4-204ENST00000417876 MORN1Q5T089 497 aa9.76□□□□□ -0.85
RFC4-204ENST00000417876 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
RFC4-204ENST00000417876 C6orf229H3BNL8 230 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 ACTN4O43707 911 aaKnown RBP9.75□□□□□ -0.85
RFC4-204ENST00000417876 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 LRRN4Q8WUT4 740 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
RFC4-204ENST00000417876 GPR37L1O60883 481 aa9.74□□□□□ -0.85
RFC4-204ENST00000417876 ABL2P42684 1182 aa9.74□□□□□ -0.85
RFC4-204ENST00000417876 SLC27A5Q9Y2P5 690 aa9.74□□□□□ -0.85
RFC4-204ENST00000417876 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
RFC4-204ENST00000417876 KMT5BQ4FZB7 885 aa9.73□□□□□ -0.85
RFC4-204ENST00000417876 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
RFC4-204ENST00000417876 TSC1Q92574 1164 aa9.73□□□□□ -0.85
RFC4-204ENST00000417876 BCAMP50895 628 aa9.72□□□□□ -0.85
RFC4-204ENST00000417876 IRF5Q13568 498 aa9.72□□□□□ -0.85
RFC4-204ENST00000417876 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
RFC4-204ENST00000417876 SOWAHBA6NEL2 793 aa9.71□□□□□ -0.86
RFC4-204ENST00000417876 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
RFC4-204ENST00000417876 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
RFC4-204ENST00000417876 APLP1P51693 650 aa9.71□□□□□ -0.86
RFC4-204ENST00000417876 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
RFC4-204ENST00000417876 RNF19BQ6ZMZ0 732 aa9.69□□□□□ -0.86
RFC4-204ENST00000417876 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
RFC4-204ENST00000417876 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
RFC4-204ENST00000417876 HPS5Q9UPZ3 1129 aa9.69□□□□□ -0.86
RFC4-204ENST00000417876 PPP4CP60510 307 aa9.68□□□□□ -0.86
RFC4-204ENST00000417876 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
RFC4-204ENST00000417876 WNT2BQ93097 391 aa9.67□□□□□ -0.86
RFC4-204ENST00000417876 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
RFC4-204ENST00000417876 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
RFC4-204ENST00000417876 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
RFC4-204ENST00000417876 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
RFC4-204ENST00000417876 TSR3Q9UJK0 312 aaKnown RBP9.66□□□□□ -0.86
RFC4-204ENST00000417876 NR6A1Q15406 480 aa9.65□□□□□ -0.86
RFC4-204ENST00000417876 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
RFC4-204ENST00000417876 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
RFC4-204ENST00000417876 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
RFC4-204ENST00000417876 PRM3Q9NNZ6 103 aa9.65□□□□□ -0.86
RFC4-204ENST00000417876 Q3C1V9 767 aa9.64□□□□□ -0.87
RFC4-204ENST00000417876 ADAMTS19Q8TE59 1207 aa9.64□□□□□ -0.87
RFC4-204ENST00000417876 WBP1LQ9NX94 342 aa9.64□□□□□ -0.87
RFC4-204ENST00000417876 DESI1Q6ICB0 168 aa9.63□□□□□ -0.87
RFC4-204ENST00000417876 PRR14Q9BWN1 585 aa9.63□□□□□ -0.87
RFC4-204ENST00000417876 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
RFC4-204ENST00000417876 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
RFC4-204ENST00000417876 GLMNQ92990 594 aa9.62□□□□□ -0.87
RFC4-204ENST00000417876 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
RFC4-204ENST00000417876 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
RFC4-204ENST00000417876 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
RFC4-204ENST00000417876 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
RFC4-204ENST00000417876 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
RFC4-204ENST00000417876 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
RFC4-204ENST00000417876 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
RFC4-204ENST00000417876 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
RFC4-204ENST00000417876 RNF166Q96A37 237 aaPredicted RBP9.59□□□□□ -0.87
RFC4-204ENST00000417876 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
RFC4-204ENST00000417876 THSD4Q6ZMP0 1018 aa9.58□□□□□ -0.88
RFC4-204ENST00000417876 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
RFC4-204ENST00000417876 NR1I2O75469 434 aa9.57□□□□□ -0.88
RFC4-204ENST00000417876 WASHC4Q2M389 1173 aa9.57□□□□□ -0.88
RFC4-204ENST00000417876 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
RFC4-204ENST00000417876 COPS2P61201 443 aa9.55□□□□□ -0.88
RFC4-204ENST00000417876 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
RFC4-204ENST00000417876 ALG2Q9H553 416 aa9.55□□□□□ -0.88
RFC4-204ENST00000417876 JUNDP17535 347 aa9.54□□□□□ -0.88
RFC4-204ENST00000417876 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
RFC4-204ENST00000417876 SPSB2Q99619 263 aa9.53□□□□□ -0.88
RFC4-204ENST00000417876 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
RFC4-204ENST00000417876 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
RFC4-204ENST00000417876 PTPRNQ16849 979 aa9.52□□□□□ -0.89
RFC4-204ENST00000417876 TLL1O43897 1013 aa9.51□□□□□ -0.89
RFC4-204ENST00000417876 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
RFC4-204ENST00000417876 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
RFC4-204ENST00000417876 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
RFC4-204ENST00000417876 CFAP70Q5T0N1 1121 aa9.5□□□□□ -0.89
RFC4-204ENST00000417876 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
RFC4-204ENST00000417876 FBXO45P0C2W1 286 aa9.49□□□□□ -0.89
RFC4-204ENST00000417876 MMP16P51512 607 aa9.49□□□□□ -0.89
RFC4-204ENST00000417876 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
RFC4-204ENST00000417876 FKBPLQ9UIM3 349 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms