RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
NCL-203ENST00000417652 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
NCL-203ENST00000417652 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
NCL-203ENST00000417652 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
NCL-203ENST00000417652 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
NCL-203ENST00000417652 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
NCL-203ENST00000417652 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
NCL-203ENST00000417652 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.84
NCL-203ENST00000417652 DCCP43146 1447 aa9.77□□□□□ -0.85
NCL-203ENST00000417652 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
NCL-203ENST00000417652 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
NCL-203ENST00000417652 TECPR2O15040 1411 aa9.76□□□□□ -0.85
NCL-203ENST00000417652 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
NCL-203ENST00000417652 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
NCL-203ENST00000417652 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
NCL-203ENST00000417652 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
NCL-203ENST00000417652 ASXL1Q8IXJ9 1541 aa9.75□□□□□ -0.85
NCL-203ENST00000417652 ROBO1Q9Y6N7 1651 aa9.74□□□□□ -0.85
NCL-203ENST00000417652 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
NCL-203ENST00000417652 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
NCL-203ENST00000417652 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
NCL-203ENST00000417652 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
NCL-203ENST00000417652 ADGRB1O14514 1584 aa9.73□□□□□ -0.85
NCL-203ENST00000417652 WASLO00401 505 aaPredicted RBP9.73□□□□□ -0.85
NCL-203ENST00000417652 SRPK2P78362 688 aaKnown RBP9.73□□□□□ -0.85
NCL-203ENST00000417652 EIF3AQ14152 1382 aaKnown RBP9.73□□□□□ -0.85
NCL-203ENST00000417652 MST1RQ04912 1400 aa9.73□□□□□ -0.85
NCL-203ENST00000417652 C1orf167Q5SNV9 1468 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 DLC1Q96QB1 1528 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 FOXO3O43524 673 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 PSME1Q06323 249 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 DDX17Q92841 729 aaKnown RBP9.72□□□□□ -0.85
NCL-203ENST00000417652 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
NCL-203ENST00000417652 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
NCL-203ENST00000417652 PHLPP1O60346 1717 aa9.71□□□□□ -0.85
NCL-203ENST00000417652 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
NCL-203ENST00000417652 PMFBP1Q8TBY8 1022 aa9.71□□□□□ -0.86
NCL-203ENST00000417652 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
NCL-203ENST00000417652 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.86
NCL-203ENST00000417652 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
NCL-203ENST00000417652 EVC2Q86UK5 1308 aa9.7□□□□□ -0.86
NCL-203ENST00000417652 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
NCL-203ENST00000417652 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
NCL-203ENST00000417652 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
NCL-203ENST00000417652 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
NCL-203ENST00000417652 NUDT16Q96DE0 195 aaKnown RBP9.69□□□□□ -0.86
NCL-203ENST00000417652 JCADQ9P266 1359 aa9.68□□□□□ -0.86
NCL-203ENST00000417652 DISP3Q9P2K9 1392 aa9.68□□□□□ -0.86
NCL-203ENST00000417652 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
NCL-203ENST00000417652 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
NCL-203ENST00000417652 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
NCL-203ENST00000417652 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
NCL-203ENST00000417652 ARHGEF28Q8N1W1 1705 aaKnown RBP9.68□□□□□ -0.86
NCL-203ENST00000417652 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
NCL-203ENST00000417652 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
NCL-203ENST00000417652 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
NCL-203ENST00000417652 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
NCL-203ENST00000417652 FMN2Q9NZ56 1722 aa9.66□□□□□ -0.86
NCL-203ENST00000417652 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
NCL-203ENST00000417652 RGPD8O14715 1765 aaPredicted RBP9.65□□□□□ -0.86
NCL-203ENST00000417652 SPATA31A6Q5VVP1 1343 aa9.65□□□□□ -0.86
NCL-203ENST00000417652 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
NCL-203ENST00000417652 AHDC1Q5TGY3 1603 aaPredicted RBP9.64□□□□□ -0.87
NCL-203ENST00000417652 SOS2Q07890 1332 aaPredicted RBP9.64□□□□□ -0.87
NCL-203ENST00000417652 PRR36Q9H6K5 1346 aa9.64□□□□□ -0.87
NCL-203ENST00000417652 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
NCL-203ENST00000417652 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
NCL-203ENST00000417652 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
NCL-203ENST00000417652 TULP4Q9NRJ4 1543 aa9.63□□□□□ -0.87
NCL-203ENST00000417652 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
NCL-203ENST00000417652 TMF1P82094 1093 aa9.63□□□□□ -0.87
NCL-203ENST00000417652 C1QBPQ07021 282 aaKnown RBP9.63□□□□□ -0.87
NCL-203ENST00000417652 ADGRB2O60241 1585 aa9.63□□□□□ -0.87
NCL-203ENST00000417652 USP47Q96K76 1375 aa9.63□□□□□ -0.87
NCL-203ENST00000417652 ACEP12821 1306 aa9.62□□□□□ -0.87
NCL-203ENST00000417652 KIF1AQ12756 1690 aa9.62□□□□□ -0.87
NCL-203ENST00000417652 EIF4G2P78344 907 aaKnown RBP eCLIP9.62□□□□□ -0.878e-30■□□□□ 8.2
NCL-203ENST00000417652 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
NCL-203ENST00000417652 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
NCL-203ENST00000417652 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
NCL-203ENST00000417652 SPATA31A3Q5VYP0 1347 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 NHSL1Q5SYE7 1610 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 C8orf37Q96NL8 207 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 PPIP5K1Q6PFW1 1433 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 PNPLA6Q8IY17 1366 aa9.61□□□□□ -0.87
NCL-203ENST00000417652 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
NCL-203ENST00000417652 ABTB2Q8N961 1025 aa9.6□□□□□ -0.87
NCL-203ENST00000417652 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
NCL-203ENST00000417652 ARHGEF10O15013 1369 aa9.6□□□□□ -0.87
NCL-203ENST00000417652 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
NCL-203ENST00000417652 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
NCL-203ENST00000417652 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms