RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TRPM2O94759 1503 aa9.99□□□□□ -0.81
VRK2-203ENST00000417641 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
VRK2-203ENST00000417641 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
VRK2-203ENST00000417641 GRPEL1Q9HAV7 217 aa9.99□□□□□ -0.81
VRK2-203ENST00000417641 KIAA1210Q9ULL0 1709 aa9.98□□□□□ -0.81
VRK2-203ENST00000417641 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
VRK2-203ENST00000417641 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
VRK2-203ENST00000417641 C22orf23Q9BZE7 217 aa9.98□□□□□ -0.81
VRK2-203ENST00000417641 GZF1Q9H116 711 aaPredicted RBP9.98□□□□□ -0.81
VRK2-203ENST00000417641 RWDD1Q9H446 243 aaPredicted RBP9.98□□□□□ -0.81
VRK2-203ENST00000417641 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
VRK2-203ENST00000417641 HSP90AA1P07900 732 aaKnown RBP9.97□□□□□ -0.81
VRK2-203ENST00000417641 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
VRK2-203ENST00000417641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
VRK2-203ENST00000417641 ESPNB1AK53 854 aa9.97□□□□□ -0.81
VRK2-203ENST00000417641 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
VRK2-203ENST00000417641 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
VRK2-203ENST00000417641 CCDC27Q2M243 656 aa9.97□□□□□ -0.81
VRK2-203ENST00000417641 RUNDC1Q96C34 613 aa9.96□□□□□ -0.81
VRK2-203ENST00000417641 ZMYND15Q9H091 742 aa9.96□□□□□ -0.81
VRK2-203ENST00000417641 NEURL4Q96JN8 1562 aa9.96□□□□□ -0.81
VRK2-203ENST00000417641 ARHGAP5Q13017 1502 aa9.96□□□□□ -0.82
VRK2-203ENST00000417641 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
VRK2-203ENST00000417641 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
VRK2-203ENST00000417641 SHROOM2Q13796 1616 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
VRK2-203ENST00000417641 SNX21Q969T3 373 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 GAS2L3Q86XJ1 694 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 ARXQ96QS3 562 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 MYH16Q9H6N6 1097 aa9.95□□□□□ -0.82
VRK2-203ENST00000417641 SLC24A1O60721 1099 aa9.94□□□□□ -0.82
VRK2-203ENST00000417641 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
VRK2-203ENST00000417641 HDAC1Q13547 482 aaPredicted RBP9.94□□□□□ -0.82
VRK2-203ENST00000417641 TCP11L2Q8N4U5 519 aa9.94□□□□□ -0.82
VRK2-203ENST00000417641 SMC5Q8IY18 1101 aa9.94□□□□□ -0.82
VRK2-203ENST00000417641 VSIG10Q8N0Z9 540 aa9.94□□□□□ -0.82
VRK2-203ENST00000417641 SBNO2Q9Y2G9 1366 aa9.94□□□□□ -0.82
VRK2-203ENST00000417641 MYO3AQ8NEV4 1616 aa9.93□□□□□ -0.82
VRK2-203ENST00000417641 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
VRK2-203ENST00000417641 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
VRK2-203ENST00000417641 RRP7AQ9Y3A4 280 aaKnown RBP9.93□□□□□ -0.82
VRK2-203ENST00000417641 MYOM2P54296 1465 aa9.92□□□□□ -0.82
VRK2-203ENST00000417641 BCL2L13Q9BXK5 485 aa9.92□□□□□ -0.82
VRK2-203ENST00000417641 ZNF518AQ6AHZ1 1483 aa9.92□□□□□ -0.82
VRK2-203ENST00000417641 RAB3GAP1Q15042 981 aa9.92□□□□□ -0.82
VRK2-203ENST00000417641 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
VRK2-203ENST00000417641 TPM2P07951 284 aa9.91□□□□□ -0.82
VRK2-203ENST00000417641 ZKSCAN2Q63HK3 967 aa9.91□□□□□ -0.82
VRK2-203ENST00000417641 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
VRK2-203ENST00000417641 PPP1R9BQ96SB3 815 aa9.91□□□□□ -0.82
VRK2-203ENST00000417641 ABCA6Q8N139 1617 aa9.91□□□□□ -0.82
VRK2-203ENST00000417641 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
VRK2-203ENST00000417641 FBLN2P98095 1184 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 DZIP1LQ8IYY4 767 aaKnown RBP9.9□□□□□ -0.82
VRK2-203ENST00000417641 ADGRB2O60241 1585 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 VWDEQ8N2E2 1590 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 NRXN1Q9ULB1 1477 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 KIF2CQ99661 725 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 DEPDC5O75140 1603 aa9.9□□□□□ -0.82
VRK2-203ENST00000417641 PLCH2O75038 1416 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 CLEC17AQ6ZS10 378 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 ADGRL1O94910 1474 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 NSD3Q9BZ95 1437 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
VRK2-203ENST00000417641 ABCC1P33527 1531 aa9.89□□□□□ -0.83
VRK2-203ENST00000417641 ADGRF5Q8IZF2 1346 aa9.88□□□□□ -0.83
VRK2-203ENST00000417641 TET3O43151 1660 aa9.88□□□□□ -0.83
VRK2-203ENST00000417641 TRIM27P14373 513 aa9.88□□□□□ -0.83
VRK2-203ENST00000417641 MORC1Q86VD1 984 aa9.88□□□□□ -0.83
VRK2-203ENST00000417641 NUCB1Q02818 461 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 ZBTB40Q9NUA8 1239 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 IBTKQ9P2D0 1353 aaPredicted RBP9.87□□□□□ -0.83
VRK2-203ENST00000417641 NOS1P29475 1434 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 PTMSP20962 102 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 GBP4Q96PP9 640 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 PDCL3Q9H2J4 239 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
VRK2-203ENST00000417641 MTHFSP49914 203 aa9.86□□□□□ -0.83
VRK2-203ENST00000417641 CCDC173Q0VFZ6 552 aa9.86□□□□□ -0.83
VRK2-203ENST00000417641 IFT172Q9UG01 1749 aa9.86□□□□□ -0.83
VRK2-203ENST00000417641 OFD1O75665 1012 aa9.86□□□□□ -0.83
VRK2-203ENST00000417641 TERF1P54274 439 aa9.86□□□□□ -0.83
VRK2-203ENST00000417641 TRIM44Q96DX7 344 aaPredicted RBP9.86□□□□□ -0.83
VRK2-203ENST00000417641 CD109Q6YHK3 1445 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
VRK2-203ENST00000417641 ATF7IPQ6VMQ6 1270 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 SSH1Q8WYL5 1049 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
VRK2-203ENST00000417641 SETBP1Q9Y6X0 1596 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 ZFYVE16Q7Z3T8 1539 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 RIPK4P57078 832 aa9.85□□□□□ -0.83
VRK2-203ENST00000417641 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
VRK2-203ENST00000417641 ZSCAN30Q86W11 494 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms