RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 RPRD2Q5VT52 1461 aaKnown RBP11.41□□□□□ -0.58
RBM39-209ENST00000416529 RIMBP2O15034 1052 aa11.4□□□□□ -0.58
RBM39-209ENST00000416529 ITGAEP38570 1179 aa11.39□□□□□ -0.59
RBM39-209ENST00000416529 EMP3P54852 163 aa11.39□□□□□ -0.59
RBM39-209ENST00000416529 NPATQ14207 1427 aa11.39□□□□□ -0.59
RBM39-209ENST00000416529 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
RBM39-209ENST00000416529 MS4A4AQ96JQ5 239 aa11.39□□□□□ -0.59
RBM39-209ENST00000416529 WASHC2CQ9Y4E1 1318 aa11.38□□□□□ -0.59
RBM39-209ENST00000416529 RGL2O15211 777 aa11.38□□□□□ -0.59
RBM39-209ENST00000416529 GGT6Q6P531 493 aa11.37□□□□□ -0.59
RBM39-209ENST00000416529 IQGAP3Q86VI3 1631 aa11.37□□□□□ -0.59
RBM39-209ENST00000416529 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
RBM39-209ENST00000416529 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
RBM39-209ENST00000416529 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
RBM39-209ENST00000416529 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
RBM39-209ENST00000416529 NUP155O75694 1391 aa11.36□□□□□ -0.59
RBM39-209ENST00000416529 TET3O43151 1660 aa11.36□□□□□ -0.59
RBM39-209ENST00000416529 ABCC3O15438 1527 aa11.35□□□□□ -0.59
RBM39-209ENST00000416529 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
RBM39-209ENST00000416529 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
RBM39-209ENST00000416529 PZPP20742 1482 aa11.35□□□□□ -0.59
RBM39-209ENST00000416529 SIGLEC1Q9BZZ2 1709 aa11.34□□□□□ -0.59
RBM39-209ENST00000416529 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
RBM39-209ENST00000416529 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
RBM39-209ENST00000416529 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
RBM39-209ENST00000416529 EFCAB6Q5THR3 1501 aa11.32□□□□□ -0.6
RBM39-209ENST00000416529 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
RBM39-209ENST00000416529 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
RBM39-209ENST00000416529 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
RBM39-209ENST00000416529 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
RBM39-209ENST00000416529 NLRP1Q9C000 1473 aa11.3□□□□□ -0.6
RBM39-209ENST00000416529 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
RBM39-209ENST00000416529 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
RBM39-209ENST00000416529 NOS1P29475 1434 aa11.29□□□□□ -0.6
RBM39-209ENST00000416529 CEBPAP49715 358 aaPredicted RBP11.29□□□□□ -0.6
RBM39-209ENST00000416529 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
RBM39-209ENST00000416529 PTPRTO14522 1441 aa11.28□□□□□ -0.6
RBM39-209ENST00000416529 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
RBM39-209ENST00000416529 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
RBM39-209ENST00000416529 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
RBM39-209ENST00000416529 C3P01024 1663 aa11.27□□□□□ -0.6
RBM39-209ENST00000416529 CEP152O94986 1710 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 TNRQ92752 1358 aa11.26□□□□□ -0.61
RBM39-209ENST00000416529 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
RBM39-209ENST00000416529 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
RBM39-209ENST00000416529 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
RBM39-209ENST00000416529 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
RBM39-209ENST00000416529 E9PCH4 1651 aa11.24□□□□□ -0.61
RBM39-209ENST00000416529 TRPM2O94759 1503 aa11.23□□□□□ -0.61
RBM39-209ENST00000416529 A2ML1A8K2U0 1454 aa11.22□□□□□ -0.61
RBM39-209ENST00000416529 ERBB3P21860 1342 aa11.22□□□□□ -0.61
RBM39-209ENST00000416529 ZNF142P52746 1687 aaPredicted RBP11.22□□□□□ -0.61
RBM39-209ENST00000416529 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
RBM39-209ENST00000416529 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.61
RBM39-209ENST00000416529 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
RBM39-209ENST00000416529 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 PLA2R1Q13018 1463 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 PCGF6Q9BYE7 350 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
RBM39-209ENST00000416529 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
RBM39-209ENST00000416529 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
RBM39-209ENST00000416529 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
RBM39-209ENST00000416529 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
RBM39-209ENST00000416529 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
RBM39-209ENST00000416529 CEP170BQ9Y4F5 1589 aaPredicted RBP11.17□□□□□ -0.62
RBM39-209ENST00000416529 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
RBM39-209ENST00000416529 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
RBM39-209ENST00000416529 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
RBM39-209ENST00000416529 SYNMO15061 1565 aa11.16□□□□□ -0.62
RBM39-209ENST00000416529 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
RBM39-209ENST00000416529 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
RBM39-209ENST00000416529 IDI1Q13907 227 aa11.16□□□□□ -0.62
RBM39-209ENST00000416529 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
RBM39-209ENST00000416529 KIF1BO60333 1816 aa11.16□□□□□ -0.62
RBM39-209ENST00000416529 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 SLIT1O75093 1534 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 KIF3CO14782 793 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 SPNS2Q8IVW8 549 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
RBM39-209ENST00000416529 ARHGAP23Q9P227 1491 aa11.14□□□□□ -0.63
RBM39-209ENST00000416529 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
RBM39-209ENST00000416529 ANKLE2Q86XL3 938 aa11.13□□□□□ -0.63
RBM39-209ENST00000416529 EID1Q9Y6B2 187 aa11.13□□□□□ -0.63
RBM39-209ENST00000416529 TMEM2Q9UHN6 1383 aa11.13□□□□□ -0.63
RBM39-209ENST00000416529 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
RBM39-209ENST00000416529 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
RBM39-209ENST00000416529 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
RBM39-209ENST00000416529 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
RBM39-209ENST00000416529 MED14O60244 1454 aa11.12□□□□□ -0.63
RBM39-209ENST00000416529 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
RBM39-209ENST00000416529 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
RBM39-209ENST00000416529 SLC34A2O95436 690 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms