RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 NLRP1Q9C000 1473 aa24.41■■□□□ 1.5
MSI2-203ENST00000416426 ABCC11Q96J66 1382 aa24.41■■□□□ 1.5
MSI2-203ENST00000416426 HDGFP51858 240 aaKnown RBP24.4■■□□□ 1.5
MSI2-203ENST00000416426 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.5
MSI2-203ENST00000416426 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.5
MSI2-203ENST00000416426 PDE3BQ13370 1112 aa24.39■■□□□ 1.5
MSI2-203ENST00000416426 C3P01024 1663 aa24.39■■□□□ 1.49
MSI2-203ENST00000416426 TMEM2Q9UHN6 1383 aa24.39■■□□□ 1.49
MSI2-203ENST00000416426 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
MSI2-203ENST00000416426 CABP2Q9NPB3 220 aa24.38■■□□□ 1.49
MSI2-203ENST00000416426 POGKQ9P215 609 aa24.38■■□□□ 1.49
MSI2-203ENST00000416426 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.492e-6■■■■□ 20
MSI2-203ENST00000416426 BCANQ96GW7 911 aa24.38■■□□□ 1.49
MSI2-203ENST00000416426 ADAMTS8Q9UP79 889 aa24.38■■□□□ 1.49
MSI2-203ENST00000416426 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
MSI2-203ENST00000416426 ADAMTSL3P82987 1691 aa24.37■■□□□ 1.49
MSI2-203ENST00000416426 NSD2O96028 1365 aa24.37■■□□□ 1.49
MSI2-203ENST00000416426 RNF123Q5XPI4 1314 aa24.36■■□□□ 1.49
MSI2-203ENST00000416426 MINK1Q8N4C8 1332 aaPredicted RBP24.35■■□□□ 1.49
MSI2-203ENST00000416426 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
MSI2-203ENST00000416426 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
MSI2-203ENST00000416426 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
MSI2-203ENST00000416426 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
MSI2-203ENST00000416426 TECPR2O15040 1411 aa24.33■■□□□ 1.49
MSI2-203ENST00000416426 SRPK2P78362 688 aaKnown RBP24.32■■□□□ 1.48
MSI2-203ENST00000416426 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
MSI2-203ENST00000416426 METP08581 1390 aa24.32■■□□□ 1.48
MSI2-203ENST00000416426 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
MSI2-203ENST00000416426 CPS1P31327 1500 aa24.31■■□□□ 1.48
MSI2-203ENST00000416426 CD163L1Q9NR16 1453 aa24.31■■□□□ 1.48
MSI2-203ENST00000416426 MORC1Q86VD1 984 aa24.31■■□□□ 1.48
MSI2-203ENST00000416426 A0A1W2PP64 1363 aa24.3■■□□□ 1.48
MSI2-203ENST00000416426 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
MSI2-203ENST00000416426 PLPPR3Q6T4P5 718 aa24.3■■□□□ 1.48
MSI2-203ENST00000416426 CDK19Q9BWU1 502 aa24.29■■□□□ 1.48
MSI2-203ENST00000416426 PLEKHH1Q9ULM0 1364 aa24.28■■□□□ 1.48
MSI2-203ENST00000416426 ANKRD26Q9UPS8 1709 aa24.28■■□□□ 1.48
MSI2-203ENST00000416426 PLEKHG1Q9ULL1 1385 aa24.28■■□□□ 1.48
MSI2-203ENST00000416426 SLIT1O75093 1534 aa24.27■■□□□ 1.48
MSI2-203ENST00000416426 IRX6P78412 446 aaPredicted RBP24.27■■□□□ 1.48
MSI2-203ENST00000416426 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
MSI2-203ENST00000416426 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
MSI2-203ENST00000416426 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
MSI2-203ENST00000416426 ARHGAP23Q9P227 1491 aa24.27■■□□□ 1.48
MSI2-203ENST00000416426 MED14O60244 1454 aa24.26■■□□□ 1.47
MSI2-203ENST00000416426 CEBPAP49715 358 aaPredicted RBP24.26■■□□□ 1.47
MSI2-203ENST00000416426 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
MSI2-203ENST00000416426 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
MSI2-203ENST00000416426 SALL2Q9Y467 1007 aaPredicted RBP24.24■■□□□ 1.47
MSI2-203ENST00000416426 ATP7BP35670 1465 aa24.23■■□□□ 1.47
MSI2-203ENST00000416426 PPP4R2Q9NY27 417 aa24.21■■□□□ 1.47
MSI2-203ENST00000416426 ZNF521Q96K83 1311 aa24.21■■□□□ 1.47
MSI2-203ENST00000416426 LTKP29376 864 aa24.21■■□□□ 1.47
MSI2-203ENST00000416426 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
MSI2-203ENST00000416426 HDGFL2Q7Z4V5 671 aaPredicted RBP24.19■■□□□ 1.46
MSI2-203ENST00000416426 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
MSI2-203ENST00000416426 WASLO00401 505 aaPredicted RBP24.18■■□□□ 1.46
MSI2-203ENST00000416426 TXNDC2Q86VQ3 553 aa24.17■■□□□ 1.46
MSI2-203ENST00000416426 NGEFQ8N5V2 710 aa24.17■■□□□ 1.46
MSI2-203ENST00000416426 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
MSI2-203ENST00000416426 ADGRB2O60241 1585 aa24.17■■□□□ 1.46
MSI2-203ENST00000416426 MTHFSP49914 203 aa24.15■■□□□ 1.46
MSI2-203ENST00000416426 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
MSI2-203ENST00000416426 EID1Q9Y6B2 187 aa24.15■■□□□ 1.46
MSI2-203ENST00000416426 FYB1O15117 783 aa24.14■■□□□ 1.45
MSI2-203ENST00000416426 TNNT2P45379 298 aaPredicted RBP24.14■■□□□ 1.45
MSI2-203ENST00000416426 DIP2AQ14689 1571 aa24.14■■□□□ 1.45
MSI2-203ENST00000416426 CFAP53Q96M91 514 aa24.13■■□□□ 1.45
MSI2-203ENST00000416426 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
MSI2-203ENST00000416426 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
MSI2-203ENST00000416426 CCDC146Q8IYE0 955 aa24.12■■□□□ 1.45
MSI2-203ENST00000416426 THEMISQ8N1K5 641 aaPredicted RBP24.12■■□□□ 1.45
MSI2-203ENST00000416426 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.11■■□□□ 1.45
MSI2-203ENST00000416426 CDC42BPGQ6DT37 1551 aa24.11■■□□□ 1.45
MSI2-203ENST00000416426 GGNBP2Q9H3C7 697 aa24.1■■□□□ 1.45
MSI2-203ENST00000416426 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
MSI2-203ENST00000416426 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
MSI2-203ENST00000416426 APAF1O14727 1248 aa24.1■■□□□ 1.45
MSI2-203ENST00000416426 RRP1P56182 461 aaKnown RBP24.1■■□□□ 1.45
MSI2-203ENST00000416426 GOLGA2Q08379 1002 aa24.09■■□□□ 1.45
MSI2-203ENST00000416426 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
MSI2-203ENST00000416426 AKAP12Q02952 1782 aa24.09■■□□□ 1.45
MSI2-203ENST00000416426 MON2Q7Z3U7 1717 aa24.09■■□□□ 1.45
MSI2-203ENST00000416426 COL3A1P02461 1466 aaPredicted RBP24.09■■□□□ 1.45
MSI2-203ENST00000416426 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.45
MSI2-203ENST00000416426 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
MSI2-203ENST00000416426 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
MSI2-203ENST00000416426 DUSP27Q5VZP5 1158 aa24.07■■□□□ 1.44
MSI2-203ENST00000416426 TRMT2AQ8IZ69 625 aaKnown RBP24.07■■□□□ 1.44
MSI2-203ENST00000416426 NUDT16Q96DE0 195 aaKnown RBP24.07■■□□□ 1.44
MSI2-203ENST00000416426 TOPAZ1Q8N9V7 1692 aa24.06■■□□□ 1.44
MSI2-203ENST00000416426 SLFN5Q08AF3 891 aa24.05■■□□□ 1.44
MSI2-203ENST00000416426 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
MSI2-203ENST00000416426 ITSN1Q15811 1721 aa24.05■■□□□ 1.44
MSI2-203ENST00000416426 PTCH1Q13635 1447 aa24.05■■□□□ 1.44
MSI2-203ENST00000416426 CCDC61Q9Y6R9 512 aa24.04■■□□□ 1.44
MSI2-203ENST00000416426 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
MSI2-203ENST00000416426 NCBP3Q53F19 620 aaKnown RBP24.03■■□□□ 1.44
MSI2-203ENST00000416426 TSHZ2Q9NRE2 1034 aa24.03■■□□□ 1.44
MSI2-203ENST00000416426 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms