RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
CPNE1-209ENST00000415920 ADAMTS2O95450 1211 aa19.76■□□□□ 0.75
CPNE1-209ENST00000415920 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
CPNE1-209ENST00000415920 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
CPNE1-209ENST00000415920 VGFO15240 615 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-209ENST00000415920 QTRT2Q9H974 415 aaKnown RBP19.74■□□□□ 0.75
CPNE1-209ENST00000415920 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-209ENST00000415920 SIN3AQ96ST3 1273 aa19.73■□□□□ 0.75
CPNE1-209ENST00000415920 SPATA31E1Q6ZUB1 1445 aa19.73■□□□□ 0.75
CPNE1-209ENST00000415920 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
CPNE1-209ENST00000415920 RPGRIP1LQ68CZ1 1315 aa19.71■□□□□ 0.75
CPNE1-209ENST00000415920 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
CPNE1-209ENST00000415920 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
CPNE1-209ENST00000415920 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
CPNE1-209ENST00000415920 COL22A1Q8NFW1 1626 aaPredicted RBP19.69■□□□□ 0.74
CPNE1-209ENST00000415920 CDC42BPGQ6DT37 1551 aa19.69■□□□□ 0.74
CPNE1-209ENST00000415920 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
CPNE1-209ENST00000415920 PXDNQ92626 1479 aa19.67■□□□□ 0.74
CPNE1-209ENST00000415920 XPCQ01831 940 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-209ENST00000415920 MYOM2P54296 1465 aa19.66■□□□□ 0.74
CPNE1-209ENST00000415920 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
CPNE1-209ENST00000415920 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
CPNE1-209ENST00000415920 PLEKHH1Q9ULM0 1364 aa19.65■□□□□ 0.74
CPNE1-209ENST00000415920 NUTM2FA1L443 756 aa19.64■□□□□ 0.73
CPNE1-209ENST00000415920 ESCO1Q5FWF5 840 aa19.64■□□□□ 0.73
CPNE1-209ENST00000415920 STK26Q9P289 416 aa19.64■□□□□ 0.73
CPNE1-209ENST00000415920 USP21Q9UK80 565 aa19.64■□□□□ 0.73
CPNE1-209ENST00000415920 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
CPNE1-209ENST00000415920 TECPR2O15040 1411 aa19.62■□□□□ 0.73
CPNE1-209ENST00000415920 ATRNO75882 1429 aa19.62■□□□□ 0.73
CPNE1-209ENST00000415920 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
CPNE1-209ENST00000415920 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-209ENST00000415920 FOXO3O43524 673 aa19.61■□□□□ 0.73
CPNE1-209ENST00000415920 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
CPNE1-209ENST00000415920 BCL9LQ86UU0 1499 aa19.6■□□□□ 0.73
CPNE1-209ENST00000415920 LRPPRCP42704 1394 aaKnown RBP19.59■□□□□ 0.73
CPNE1-209ENST00000415920 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
CPNE1-209ENST00000415920 TRPC5Q9UL62 973 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-209ENST00000415920 FMN2Q9NZ56 1722 aa19.59■□□□□ 0.73
CPNE1-209ENST00000415920 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.73
CPNE1-209ENST00000415920 KIAA1210Q9ULL0 1709 aa19.58■□□□□ 0.72
CPNE1-209ENST00000415920 PIK3C2GO75747 1445 aa19.58■□□□□ 0.72
CPNE1-209ENST00000415920 ATAD2Q6PL18 1390 aa19.56■□□□□ 0.72
CPNE1-209ENST00000415920 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
CPNE1-209ENST00000415920 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-209ENST00000415920 DCAF11Q8TEB1 546 aa19.55■□□□□ 0.72
CPNE1-209ENST00000415920 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
CPNE1-209ENST00000415920 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
CPNE1-209ENST00000415920 YTHDC2Q9H6S0 1430 aaKnown RBP19.54■□□□□ 0.72
CPNE1-209ENST00000415920 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
CPNE1-209ENST00000415920 KIF1AQ12756 1690 aa19.52■□□□□ 0.71
CPNE1-209ENST00000415920 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.51■□□□□ 0.71
CPNE1-209ENST00000415920 GLI3P10071 1580 aa19.51■□□□□ 0.71
CPNE1-209ENST00000415920 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
CPNE1-209ENST00000415920 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
CPNE1-209ENST00000415920 SLIT2O94813 1529 aa19.49■□□□□ 0.71
CPNE1-209ENST00000415920 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-209ENST00000415920 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
CPNE1-209ENST00000415920 EP400Q96L91 3159 aa19.47■□□□□ 0.71
CPNE1-209ENST00000415920 CFAP70Q5T0N1 1121 aa19.47■□□□□ 0.71
CPNE1-209ENST00000415920 C14orf93Q9H972 538 aaKnown RBP19.47■□□□□ 0.71
CPNE1-209ENST00000415920 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
CPNE1-209ENST00000415920 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
CPNE1-209ENST00000415920 ABCA3Q99758 1704 aa19.46■□□□□ 0.71
CPNE1-209ENST00000415920 PLEKHG5O94827 1062 aa19.46■□□□□ 0.71
CPNE1-209ENST00000415920 KRT28Q7Z3Y7 464 aa19.46■□□□□ 0.71
CPNE1-209ENST00000415920 SAFB2Q14151 953 aaKnown RBP eCLIP19.45■□□□□ 0.7
CPNE1-209ENST00000415920 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
CPNE1-209ENST00000415920 PLCH1Q4KWH8 1693 aa19.44■□□□□ 0.7
CPNE1-209ENST00000415920 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
CPNE1-209ENST00000415920 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
CPNE1-209ENST00000415920 TNS3Q68CZ2 1445 aa19.43■□□□□ 0.7
CPNE1-209ENST00000415920 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
CPNE1-209ENST00000415920 PHF8Q9UPP1 1060 aa19.43■□□□□ 0.7
CPNE1-209ENST00000415920 ADGRB1O14514 1584 aa19.42■□□□□ 0.7
CPNE1-209ENST00000415920 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
CPNE1-209ENST00000415920 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
CPNE1-209ENST00000415920 SRCAPQ6ZRS2 3230 aa19.4■□□□□ 0.7
CPNE1-209ENST00000415920 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
CPNE1-209ENST00000415920 ROCK2O75116 1388 aaKnown RBP19.38■□□□□ 0.69
CPNE1-209ENST00000415920 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-209ENST00000415920 NWD2Q9ULI1 1742 aa19.37■□□□□ 0.69
CPNE1-209ENST00000415920 DLC1Q96QB1 1528 aa19.37■□□□□ 0.69
CPNE1-209ENST00000415920 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-209ENST00000415920 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
CPNE1-209ENST00000415920 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
CPNE1-209ENST00000415920 QRICH2Q9H0J4 1663 aa19.36■□□□□ 0.69
CPNE1-209ENST00000415920 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
CPNE1-209ENST00000415920 SBNO1A3KN83 1393 aa19.36■□□□□ 0.69
CPNE1-209ENST00000415920 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
CPNE1-209ENST00000415920 NRAPQ86VF7 1730 aa19.35■□□□□ 0.69
CPNE1-209ENST00000415920 HAP1P54257 671 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-209ENST00000415920 DEFB132Q7Z7B7 95 aa19.35■□□□□ 0.69
CPNE1-209ENST00000415920 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
CPNE1-209ENST00000415920 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-209ENST00000415920 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
CPNE1-209ENST00000415920 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
CPNE1-209ENST00000415920 PSME1Q06323 249 aa19.34■□□□□ 0.69
CPNE1-209ENST00000415920 VPS72Q15906 364 aa19.34■□□□□ 0.69
CPNE1-209ENST00000415920 CCDC125Q86Z20 511 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms