RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 C14orf93Q9H972 538 aaKnown RBP30.37■■■□□ 2.45
LMBR1-203ENST00000414218 YTHDC2Q9H6S0 1430 aaKnown RBP30.35■■■□□ 2.45
LMBR1-203ENST00000414218 CDC42BPGQ6DT37 1551 aa30.35■■■□□ 2.45
LMBR1-203ENST00000414218 KNDC1Q76NI1 1749 aa30.35■■■□□ 2.45
LMBR1-203ENST00000414218 LAMC1P11047 1609 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 MYOM2P54296 1465 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 NRXN1Q9ULB1 1477 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 PNPLA6Q8IY17 1366 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 PLEKHH1Q9ULM0 1364 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 CFAP70Q5T0N1 1121 aa30.34■■■□□ 2.45
LMBR1-203ENST00000414218 HRCP23327 699 aa30.33■■■□□ 2.45
LMBR1-203ENST00000414218 ZNF772Q68DY9 489 aaPredicted RBP30.33■■■□□ 2.45
LMBR1-203ENST00000414218 SOS2Q07890 1332 aaPredicted RBP30.31■■■□□ 2.44
LMBR1-203ENST00000414218 ESCO1Q5FWF5 840 aa30.31■■■□□ 2.44
LMBR1-203ENST00000414218 NUTM2FA1L443 756 aa30.29■■■□□ 2.44
LMBR1-203ENST00000414218 DHX57Q6P158 1386 aaKnown RBP30.28■■■□□ 2.44
LMBR1-203ENST00000414218 SIRT1Q96EB6 747 aa30.27■■■□□ 2.44
LMBR1-203ENST00000414218 AFF2P51816 1311 aa30.24■■■□□ 2.43
LMBR1-203ENST00000414218 KDM2AQ9Y2K7 1162 aa30.24■■■□□ 2.43
LMBR1-203ENST00000414218 C8orf37Q96NL8 207 aa30.23■■■□□ 2.43
LMBR1-203ENST00000414218 NPHP3Q7Z494 1330 aa30.22■■■□□ 2.43
LMBR1-203ENST00000414218 FOXO3O43524 673 aa30.22■■■□□ 2.43
LMBR1-203ENST00000414218 DCAF11Q8TEB1 546 aa30.21■■■□□ 2.43
LMBR1-203ENST00000414218 FMN2Q9NZ56 1722 aa30.21■■■□□ 2.43
LMBR1-203ENST00000414218 ADAMTS2O95450 1211 aa30.2■■■□□ 2.43
LMBR1-203ENST00000414218 XPCQ01831 940 aaPredicted RBP30.2■■■□□ 2.43
LMBR1-203ENST00000414218 SAFB2Q14151 953 aaKnown RBP eCLIP30.19■■■□□ 2.42
LMBR1-203ENST00000414218 PRAM1Q96QH2 718 aa30.19■■■□□ 2.42
LMBR1-203ENST00000414218 RXRBP28702 533 aa30.18■■■□□ 2.42
LMBR1-203ENST00000414218 PXDNQ92626 1479 aa30.17■■■□□ 2.42
LMBR1-203ENST00000414218 NGLY1Q96IV0 654 aa30.15■■■□□ 2.42
LMBR1-203ENST00000414218 POGKQ9P215 609 aa30.15■■■□□ 2.42
LMBR1-203ENST00000414218 ADGRB1O14514 1584 aa30.13■■■□□ 2.41
LMBR1-203ENST00000414218 DLC1Q96QB1 1528 aa30.12■■■□□ 2.41
LMBR1-203ENST00000414218 COL22A1Q8NFW1 1626 aaPredicted RBP30.12■■■□□ 2.41
LMBR1-203ENST00000414218 TRAK1Q9UPV9 953 aa30.12■■■□□ 2.41
LMBR1-203ENST00000414218 RGPD8O14715 1765 aaPredicted RBP30.12■■■□□ 2.41
LMBR1-203ENST00000414218 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
LMBR1-203ENST00000414218 QTRT2Q9H974 415 aaKnown RBP30.11■■■□□ 2.41
LMBR1-203ENST00000414218 KIF1AQ12756 1690 aa30.09■■■□□ 2.41
LMBR1-203ENST00000414218 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
LMBR1-203ENST00000414218 KRT28Q7Z3Y7 464 aa30.06■■■□□ 2.4
LMBR1-203ENST00000414218 CDK12Q9NYV4 1490 aaPredicted RBP30.05■■■□□ 2.4
LMBR1-203ENST00000414218 SPATA31A3Q5VYP0 1347 aa30.03■■■□□ 2.4
LMBR1-203ENST00000414218 RBM6P78332 1123 aaKnown RBP30.03■■■□□ 2.4
LMBR1-203ENST00000414218 HIRIP3Q9BW71 556 aaPredicted RBP30.03■■■□□ 2.4
LMBR1-203ENST00000414218 USP21Q9UK80 565 aa30.03■■■□□ 2.4
LMBR1-203ENST00000414218 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
LMBR1-203ENST00000414218 FNBP4Q8N3X1 1017 aaPredicted RBP30.01■■■□□ 2.39
LMBR1-203ENST00000414218 ADGRB2O60241 1585 aa30■■■□□ 2.39
LMBR1-203ENST00000414218 USP32Q8NFA0 1604 aa29.99■■■□□ 2.39
LMBR1-203ENST00000414218 PSME1Q06323 249 aa29.98■■■□□ 2.39
LMBR1-203ENST00000414218 MARF1Q9Y4F3 1742 aaKnown RBP29.98■■■□□ 2.39
LMBR1-203ENST00000414218 ANKARQ7Z5J8 1434 aa29.97■■■□□ 2.39
LMBR1-203ENST00000414218 PMFBP1Q8TBY8 1022 aa29.97■■■□□ 2.39
LMBR1-203ENST00000414218 UPF1Q92900 1129 aaKnown RBP eCLIP29.96■■■□□ 2.39
LMBR1-203ENST00000414218 TRPC5Q9UL62 973 aaPredicted RBP29.96■■■□□ 2.39
LMBR1-203ENST00000414218 RGS12O14924 1447 aa29.96■■■□□ 2.39
LMBR1-203ENST00000414218 WASLO00401 505 aaPredicted RBP29.93■■■□□ 2.38
LMBR1-203ENST00000414218 TNS3Q68CZ2 1445 aa29.93■■■□□ 2.38
LMBR1-203ENST00000414218 ARHGEF28Q8N1W1 1705 aaKnown RBP29.92■■■□□ 2.38
LMBR1-203ENST00000414218 SBNO1A3KN83 1393 aa29.91■■■□□ 2.38
LMBR1-203ENST00000414218 ATRNO75882 1429 aa29.91■■■□□ 2.38
LMBR1-203ENST00000414218 PLEKHG5O94827 1062 aa29.91■■■□□ 2.38
LMBR1-203ENST00000414218 PRR36Q9H6K5 1346 aa29.91■■■□□ 2.38
LMBR1-203ENST00000414218 LMOD2Q6P5Q4 547 aa29.9■■■□□ 2.38
LMBR1-203ENST00000414218 BCL9LQ86UU0 1499 aa29.9■■■□□ 2.38
LMBR1-203ENST00000414218 EIF3AQ14152 1382 aaKnown RBP29.9■■■□□ 2.38
LMBR1-203ENST00000414218 CABLES1Q8TDN4 633 aa29.89■■■□□ 2.38
LMBR1-203ENST00000414218 TULP4Q9NRJ4 1543 aa29.89■■■□□ 2.38
LMBR1-203ENST00000414218 HAP1P54257 671 aaPredicted RBP29.87■■■□□ 2.37
LMBR1-203ENST00000414218 KIAA1210Q9ULL0 1709 aa29.87■■■□□ 2.37
LMBR1-203ENST00000414218 NBPF1Q3BBV0 1214 aa29.85■■■□□ 2.37
LMBR1-203ENST00000414218 ARHGEF10O15013 1369 aa29.84■■■□□ 2.37
LMBR1-203ENST00000414218 GPRASP1Q5JY77 1395 aa29.82■■■□□ 2.36
LMBR1-203ENST00000414218 UNC5CLQ8IV45 518 aa29.81■■■□□ 2.36
LMBR1-203ENST00000414218 NGDNQ8NEJ9 315 aaKnown RBP29.81■■■□□ 2.36
LMBR1-203ENST00000414218 TRPM3Q9HCF6 1732 aaPredicted RBP29.81■■■□□ 2.36
LMBR1-203ENST00000414218 SLIT2O94813 1529 aa29.81■■■□□ 2.36
LMBR1-203ENST00000414218 NUDT16Q96DE0 195 aaKnown RBP29.8■■■□□ 2.36
LMBR1-203ENST00000414218 GJD4Q96KN9 370 aaPredicted RBP29.8■■■□□ 2.36
LMBR1-203ENST00000414218 SIN3AQ96ST3 1273 aa29.79■■■□□ 2.36
LMBR1-203ENST00000414218 CDK19Q9BWU1 502 aa29.79■■■□□ 2.36
LMBR1-203ENST00000414218 ABCA3Q99758 1704 aa29.79■■■□□ 2.36
LMBR1-203ENST00000414218 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.79■■■□□ 2.36
LMBR1-203ENST00000414218 L3MBTL2Q969R5 705 aa29.78■■■□□ 2.36
LMBR1-203ENST00000414218 ATP7BP35670 1465 aa29.76■■■□□ 2.35
LMBR1-203ENST00000414218 ITSN1Q15811 1721 aa29.75■■■□□ 2.35
LMBR1-203ENST00000414218 ALS2Q96Q42 1657 aa29.75■■■□□ 2.35
LMBR1-203ENST00000414218 PAK3O75914 559 aaPredicted RBP29.74■■■□□ 2.35
LMBR1-203ENST00000414218 NEUROD1Q13562 356 aa29.73■■■□□ 2.35
LMBR1-203ENST00000414218 ATAD2Q6PL18 1390 aa29.73■■■□□ 2.35
LMBR1-203ENST00000414218 FAM83GA6ND36 823 aa29.72■■■□□ 2.35
LMBR1-203ENST00000414218 RALGAPBQ86X10 1494 aa29.71■■■□□ 2.35
LMBR1-203ENST00000414218 PLCH1Q4KWH8 1693 aa29.71■■■□□ 2.35
LMBR1-203ENST00000414218 GLI3P10071 1580 aa29.7■■■□□ 2.35
LMBR1-203ENST00000414218 NWD2Q9ULI1 1742 aa29.68■■■□□ 2.34
LMBR1-203ENST00000414218 CCDC61Q9Y6R9 512 aa29.68■■■□□ 2.34
LMBR1-203ENST00000414218 CENPJQ9HC77 1338 aaPredicted RBP29.68■■■□□ 2.34
LMBR1-203ENST00000414218 VPS72Q15906 364 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms