RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
LITAF-203ENST00000413364 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
LITAF-203ENST00000413364 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
LITAF-203ENST00000413364 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
LITAF-203ENST00000413364 MLECQ14165 292 aa17.21■□□□□ 0.35
LITAF-203ENST00000413364 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
LITAF-203ENST00000413364 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
LITAF-203ENST00000413364 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
LITAF-203ENST00000413364 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
LITAF-203ENST00000413364 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
LITAF-203ENST00000413364 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
LITAF-203ENST00000413364 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
LITAF-203ENST00000413364 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
LITAF-203ENST00000413364 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
LITAF-203ENST00000413364 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
LITAF-203ENST00000413364 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
LITAF-203ENST00000413364 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
LITAF-203ENST00000413364 PTPRMP28827 1452 aa17.17■□□□□ 0.34
LITAF-203ENST00000413364 NBR1Q14596 966 aa17.17■□□□□ 0.34
LITAF-203ENST00000413364 STK26Q9P289 416 aa17.17■□□□□ 0.34
LITAF-203ENST00000413364 USP32Q8NFA0 1604 aa17.16■□□□□ 0.34
LITAF-203ENST00000413364 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
LITAF-203ENST00000413364 ZMYM3Q14202 1370 aa17.15■□□□□ 0.34
LITAF-203ENST00000413364 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
LITAF-203ENST00000413364 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
LITAF-203ENST00000413364 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
LITAF-203ENST00000413364 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
LITAF-203ENST00000413364 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
LITAF-203ENST00000413364 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
LITAF-203ENST00000413364 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
LITAF-203ENST00000413364 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
LITAF-203ENST00000413364 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
LITAF-203ENST00000413364 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
LITAF-203ENST00000413364 POGKQ9P215 609 aa17.11■□□□□ 0.33
LITAF-203ENST00000413364 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
LITAF-203ENST00000413364 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
LITAF-203ENST00000413364 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
LITAF-203ENST00000413364 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
LITAF-203ENST00000413364 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
LITAF-203ENST00000413364 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
LITAF-203ENST00000413364 NSD2O96028 1365 aa17.09■□□□□ 0.33
LITAF-203ENST00000413364 TNRQ92752 1358 aa17.09■□□□□ 0.33
LITAF-203ENST00000413364 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.33
LITAF-203ENST00000413364 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.33
LITAF-203ENST00000413364 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.32
LITAF-203ENST00000413364 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
LITAF-203ENST00000413364 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
LITAF-203ENST00000413364 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
LITAF-203ENST00000413364 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
LITAF-203ENST00000413364 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
LITAF-203ENST00000413364 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
LITAF-203ENST00000413364 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
LITAF-203ENST00000413364 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
LITAF-203ENST00000413364 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
LITAF-203ENST00000413364 ZMYND15Q9H091 742 aa17.03■□□□□ 0.32
LITAF-203ENST00000413364 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
LITAF-203ENST00000413364 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
LITAF-203ENST00000413364 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
LITAF-203ENST00000413364 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
LITAF-203ENST00000413364 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
LITAF-203ENST00000413364 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
LITAF-203ENST00000413364 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
LITAF-203ENST00000413364 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
LITAF-203ENST00000413364 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
LITAF-203ENST00000413364 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
LITAF-203ENST00000413364 APAF1O14727 1248 aa17■□□□□ 0.31
LITAF-203ENST00000413364 GOLGA2Q08379 1002 aa17■□□□□ 0.31
LITAF-203ENST00000413364 METP08581 1390 aa17■□□□□ 0.31
LITAF-203ENST00000413364 MTHFSP49914 203 aa16.99■□□□□ 0.31
LITAF-203ENST00000413364 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
LITAF-203ENST00000413364 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
LITAF-203ENST00000413364 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
LITAF-203ENST00000413364 MED14O60244 1454 aa16.98■□□□□ 0.31
LITAF-203ENST00000413364 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
LITAF-203ENST00000413364 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
LITAF-203ENST00000413364 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
LITAF-203ENST00000413364 SIRT1Q96EB6 747 aa16.97■□□□□ 0.31
LITAF-203ENST00000413364 TECPR2O15040 1411 aa16.97■□□□□ 0.31
LITAF-203ENST00000413364 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
LITAF-203ENST00000413364 FAM135BQ49AJ0 1406 aa16.96■□□□□ 0.31
LITAF-203ENST00000413364 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
LITAF-203ENST00000413364 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
LITAF-203ENST00000413364 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
LITAF-203ENST00000413364 ANKRD26Q9UPS8 1709 aa16.95■□□□□ 0.3
LITAF-203ENST00000413364 ATP7BP35670 1465 aa16.95■□□□□ 0.3
LITAF-203ENST00000413364 FYB1O15117 783 aa16.94■□□□□ 0.3
LITAF-203ENST00000413364 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
LITAF-203ENST00000413364 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
LITAF-203ENST00000413364 CPS1P31327 1500 aa16.93■□□□□ 0.3
LITAF-203ENST00000413364 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
LITAF-203ENST00000413364 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
LITAF-203ENST00000413364 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
LITAF-203ENST00000413364 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
LITAF-203ENST00000413364 WASLO00401 505 aaPredicted RBP16.92■□□□□ 0.3
LITAF-203ENST00000413364 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
LITAF-203ENST00000413364 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
LITAF-203ENST00000413364 E9PSI1 815 aa16.91■□□□□ 0.3
LITAF-203ENST00000413364 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
LITAF-203ENST00000413364 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
LITAF-203ENST00000413364 C3P01024 1663 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms