RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
HCG18-234ENST00000413358 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
HCG18-234ENST00000413358 USP47Q96K76 1375 aa12.63□□□□□ -0.39
HCG18-234ENST00000413358 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
HCG18-234ENST00000413358 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
HCG18-234ENST00000413358 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
HCG18-234ENST00000413358 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
HCG18-234ENST00000413358 NUTM2AQ8IVF1 878 aaPredicted RBP12.6□□□□□ -0.39
HCG18-234ENST00000413358 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
HCG18-234ENST00000413358 METP08581 1390 aa12.59□□□□□ -0.39
HCG18-234ENST00000413358 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
HCG18-234ENST00000413358 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
HCG18-234ENST00000413358 RXRBP28702 533 aa12.58□□□□□ -0.4
HCG18-234ENST00000413358 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
HCG18-234ENST00000413358 STK26Q9P289 416 aa12.58□□□□□ -0.4
HCG18-234ENST00000413358 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
HCG18-234ENST00000413358 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
HCG18-234ENST00000413358 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
HCG18-234ENST00000413358 TRAK1Q9UPV9 953 aa12.57□□□□□ -0.4
HCG18-234ENST00000413358 COL16A1Q07092 1604 aaPredicted RBP12.57□□□□□ -0.4
HCG18-234ENST00000413358 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
HCG18-234ENST00000413358 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
HCG18-234ENST00000413358 DCCP43146 1447 aa12.56□□□□□ -0.4
HCG18-234ENST00000413358 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
HCG18-234ENST00000413358 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
HCG18-234ENST00000413358 TECPR2O15040 1411 aa12.55□□□□□ -0.4
HCG18-234ENST00000413358 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
HCG18-234ENST00000413358 ABCC11Q96J66 1382 aa12.55□□□□□ -0.4
HCG18-234ENST00000413358 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
HCG18-234ENST00000413358 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
HCG18-234ENST00000413358 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
HCG18-234ENST00000413358 ST20-MTHFSA0A0A6YYL1 179 aa12.53□□□□□ -0.4
HCG18-234ENST00000413358 POGKQ9P215 609 aa12.53□□□□□ -0.4
HCG18-234ENST00000413358 LRP6O75581 1613 aa12.52□□□□□ -0.4
HCG18-234ENST00000413358 SHPRHQ149N8 1683 aa12.52□□□□□ -0.4
HCG18-234ENST00000413358 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
HCG18-234ENST00000413358 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
HCG18-234ENST00000413358 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
HCG18-234ENST00000413358 AFF2P51816 1311 aa12.52□□□□□ -0.41
HCG18-234ENST00000413358 SAFB2Q14151 953 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■□□ 15.2
HCG18-234ENST00000413358 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
HCG18-234ENST00000413358 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
HCG18-234ENST00000413358 SBNO2Q9Y2G9 1366 aa12.5□□□□□ -0.41
HCG18-234ENST00000413358 MST1RQ04912 1400 aa12.49□□□□□ -0.41
HCG18-234ENST00000413358 PLEKHH1Q9ULM0 1364 aa12.49□□□□□ -0.41
HCG18-234ENST00000413358 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
HCG18-234ENST00000413358 RBM6P78332 1123 aaKnown RBP12.49□□□□□ -0.41
HCG18-234ENST00000413358 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
HCG18-234ENST00000413358 QTRT2Q9H974 415 aaKnown RBP12.49□□□□□ -0.41
HCG18-234ENST00000413358 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
HCG18-234ENST00000413358 TMF1P82094 1093 aa12.48□□□□□ -0.41
HCG18-234ENST00000413358 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
HCG18-234ENST00000413358 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
HCG18-234ENST00000413358 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
HCG18-234ENST00000413358 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
HCG18-234ENST00000413358 ADGRB2O60241 1585 aa12.47□□□□□ -0.41
HCG18-234ENST00000413358 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
HCG18-234ENST00000413358 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
HCG18-234ENST00000413358 DDX17Q92841 729 aaKnown RBP12.46□□□□□ -0.41
HCG18-234ENST00000413358 TESK2Q96S53 571 aa12.46□□□□□ -0.41
HCG18-234ENST00000413358 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
HCG18-234ENST00000413358 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
HCG18-234ENST00000413358 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
HCG18-234ENST00000413358 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
HCG18-234ENST00000413358 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
HCG18-234ENST00000413358 NALCNQ8IZF0 1738 aa12.44□□□□□ -0.42
HCG18-234ENST00000413358 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
HCG18-234ENST00000413358 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
HCG18-234ENST00000413358 USP21Q9UK80 565 aa12.43□□□□□ -0.42
HCG18-234ENST00000413358 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
HCG18-234ENST00000413358 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
HCG18-234ENST00000413358 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
HCG18-234ENST00000413358 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
HCG18-234ENST00000413358 ORAI2Q96SN7 254 aa12.42□□□□□ -0.42
HCG18-234ENST00000413358 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
HCG18-234ENST00000413358 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
HCG18-234ENST00000413358 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
HCG18-234ENST00000413358 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
HCG18-234ENST00000413358 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
HCG18-234ENST00000413358 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
HCG18-234ENST00000413358 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
HCG18-234ENST00000413358 WASLO00401 505 aaPredicted RBP12.39□□□□□ -0.43
HCG18-234ENST00000413358 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
HCG18-234ENST00000413358 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
HCG18-234ENST00000413358 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
HCG18-234ENST00000413358 RGS12O14924 1447 aa12.37□□□□□ -0.43
HCG18-234ENST00000413358 ATP7BP35670 1465 aa12.37□□□□□ -0.43
HCG18-234ENST00000413358 MYOM1P52179 1685 aa12.37□□□□□ -0.43
HCG18-234ENST00000413358 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
HCG18-234ENST00000413358 NINLQ9Y2I6 1382 aa12.36□□□□□ -0.43
HCG18-234ENST00000413358 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
HCG18-234ENST00000413358 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
HCG18-234ENST00000413358 FOXO3O43524 673 aa12.35□□□□□ -0.43
HCG18-234ENST00000413358 HAP1P54257 671 aaPredicted RBP12.35□□□□□ -0.43
HCG18-234ENST00000413358 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
HCG18-234ENST00000413358 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
HCG18-234ENST00000413358 PUS7Q96PZ0 661 aaKnown RBP12.35□□□□□ -0.43
HCG18-234ENST00000413358 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
HCG18-234ENST00000413358 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
HCG18-234ENST00000413358 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms