RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SETD1AO15047 1707 aaKnown RBP32.66■■■□□ 2.82
VRK2-202ENST00000412104 ANKRD36BQ8N2N9 1353 aa32.66■■■□□ 2.82
VRK2-202ENST00000412104 CABP2Q9NPB3 220 aa32.65■■■□□ 2.82
VRK2-202ENST00000412104 CDCA7LQ96GN5 454 aa32.63■■■□□ 2.81
VRK2-202ENST00000412104 PRAM1Q96QH2 718 aa32.63■■■□□ 2.81
VRK2-202ENST00000412104 NINLQ9Y2I6 1382 aa32.61■■■□□ 2.81
VRK2-202ENST00000412104 CGNL1Q0VF96 1302 aa32.6■■■□□ 2.81
VRK2-202ENST00000412104 POLR3AO14802 1390 aaPredicted RBP32.59■■■□□ 2.81
VRK2-202ENST00000412104 MORC1Q86VD1 984 aa32.59■■■□□ 2.81
VRK2-202ENST00000412104 POGKQ9P215 609 aa32.59■■■□□ 2.81
VRK2-202ENST00000412104 DLC1Q96QB1 1528 aa32.58■■■□□ 2.81
VRK2-202ENST00000412104 RCAN3Q9UKA8 241 aa32.58■■■□□ 2.81
VRK2-202ENST00000412104 NRXN3Q9Y4C0 1643 aa32.58■■■□□ 2.81
VRK2-202ENST00000412104 MINK1Q8N4C8 1332 aaPredicted RBP32.57■■■□□ 2.81
VRK2-202ENST00000412104 PLEKHH1Q9ULM0 1364 aa32.57■■■□□ 2.8
VRK2-202ENST00000412104 SRPK2P78362 688 aaKnown RBP32.57■■■□□ 2.8
VRK2-202ENST00000412104 ATAD2Q6PL18 1390 aa32.56■■■□□ 2.8
VRK2-202ENST00000412104 B4GALNT3Q6L9W6 998 aa32.55■■■□□ 2.8
VRK2-202ENST00000412104 NSD2O96028 1365 aa32.54■■■□□ 2.8
VRK2-202ENST00000412104 TNRQ92752 1358 aa32.54■■■□□ 2.8
VRK2-202ENST00000412104 SHPRHQ149N8 1683 aa32.54■■■□□ 2.8
VRK2-202ENST00000412104 RRP1P56182 461 aaKnown RBP32.53■■■□□ 2.8
VRK2-202ENST00000412104 A0A1W2PP64 1363 aa32.53■■■□□ 2.8
VRK2-202ENST00000412104 ZNF521Q96K83 1311 aa32.51■■■□□ 2.8
VRK2-202ENST00000412104 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.51■■■□□ 2.79
VRK2-202ENST00000412104 CCDC146Q8IYE0 955 aa32.5■■■□□ 2.79
VRK2-202ENST00000412104 TNNT2P45379 298 aaPredicted RBP32.49■■■□□ 2.79
VRK2-202ENST00000412104 UBR1Q8IWV7 1749 aa32.49■■■□□ 2.79
VRK2-202ENST00000412104 ABCC11Q96J66 1382 aa32.48■■■□□ 2.79
VRK2-202ENST00000412104 CD163L1Q9NR16 1453 aa32.46■■■□□ 2.79
VRK2-202ENST00000412104 CDK19Q9BWU1 502 aa32.43■■■□□ 2.78
VRK2-202ENST00000412104 ANKRD26Q9UPS8 1709 aa32.42■■■□□ 2.78
VRK2-202ENST00000412104 APAF1O14727 1248 aa32.41■■■□□ 2.78
VRK2-202ENST00000412104 TERF2IPQ9NYB0 399 aa32.41■■■□□ 2.78
VRK2-202ENST00000412104 KNDC1Q76NI1 1749 aa32.41■■■□□ 2.78
VRK2-202ENST00000412104 METP08581 1390 aa32.4■■■□□ 2.78
VRK2-202ENST00000412104 GOLGA2Q08379 1002 aa32.4■■■□□ 2.78
VRK2-202ENST00000412104 WAPLQ7Z5K2 1190 aa32.4■■■□□ 2.78
VRK2-202ENST00000412104 HDGFP51858 240 aaKnown RBP32.39■■■□□ 2.78
VRK2-202ENST00000412104 TMEM2Q9UHN6 1383 aa32.39■■■□□ 2.78
VRK2-202ENST00000412104 MTHFSP49914 203 aa32.39■■■□□ 2.78
VRK2-202ENST00000412104 DUSP27Q5VZP5 1158 aa32.38■■■□□ 2.77
VRK2-202ENST00000412104 CCDC136Q96JN2 1154 aa32.36■■■□□ 2.77
VRK2-202ENST00000412104 MED14O60244 1454 aa32.35■■■□□ 2.77
VRK2-202ENST00000412104 NGEFQ8N5V2 710 aa32.35■■■□□ 2.77
VRK2-202ENST00000412104 CFAP53Q96M91 514 aa32.35■■■□□ 2.77
VRK2-202ENST00000412104 NLRP1Q9C000 1473 aa32.35■■■□□ 2.77
VRK2-202ENST00000412104 KIF20BQ96Q89 1820 aa32.34■■■□□ 2.77
VRK2-202ENST00000412104 HDGFL2Q7Z4V5 671 aaPredicted RBP32.33■■■□□ 2.77
VRK2-202ENST00000412104 TECPR2O15040 1411 aa32.33■■■□□ 2.77
VRK2-202ENST00000412104 CPS1P31327 1500 aa32.32■■■□□ 2.76
VRK2-202ENST00000412104 SLFN5Q08AF3 891 aa32.32■■■□□ 2.76
VRK2-202ENST00000412104 C3P01024 1663 aa32.32■■■□□ 2.76
VRK2-202ENST00000412104 GGNBP2Q9H3C7 697 aa32.31■■■□□ 2.76
VRK2-202ENST00000412104 CABP1Q9NZU7 370 aa32.31■■■□□ 2.76
VRK2-202ENST00000412104 ATP7BP35670 1465 aa32.3■■■□□ 2.76
VRK2-202ENST00000412104 FAM135BQ49AJ0 1406 aa32.3■■■□□ 2.76
VRK2-202ENST00000412104 IQSEC2Q5JU85 1478 aa32.3■■■□□ 2.76
VRK2-202ENST00000412104 EXOC6Q8TAG9 804 aa32.3■■■□□ 2.76
VRK2-202ENST00000412104 FER1L4A9Z1Z3 1794 aa32.29■■■□□ 2.76
VRK2-202ENST00000412104 FYB1O15117 783 aa32.29■■■□□ 2.76
VRK2-202ENST00000412104 TRMT2AQ8IZ69 625 aaKnown RBP32.28■■■□□ 2.76
VRK2-202ENST00000412104 RBM19Q9Y4C8 960 aaKnown RBP32.28■■■□□ 2.76
VRK2-202ENST00000412104 TXNDC2Q86VQ3 553 aa32.26■■■□□ 2.76
VRK2-202ENST00000412104 RUNDC1Q96C34 613 aa32.26■■■□□ 2.76
VRK2-202ENST00000412104 ADAMTS13Q76LX8 1427 aa32.26■■■□□ 2.75
VRK2-202ENST00000412104 CEBPAP49715 358 aaPredicted RBP32.26■■■□□ 2.75
VRK2-202ENST00000412104 SIRT1Q96EB6 747 aa32.25■■■□□ 2.75
VRK2-202ENST00000412104 SPINK5Q9NQ38 1064 aaPredicted RBP32.25■■■□□ 2.75
VRK2-202ENST00000412104 PLIN1O60240 522 aa32.24■■■□□ 2.75
VRK2-202ENST00000412104 WASLO00401 505 aaPredicted RBP32.24■■■□□ 2.75
VRK2-202ENST00000412104 PLEKHG1Q9ULL1 1385 aa32.23■■■□□ 2.75
VRK2-202ENST00000412104 E9PSI1 815 aa32.22■■■□□ 2.75
VRK2-202ENST00000412104 NKTRP30414 1462 aaKnown RBP32.22■■■□□ 2.75
VRK2-202ENST00000412104 COL3A1P02461 1466 aaPredicted RBP32.22■■■□□ 2.75
VRK2-202ENST00000412104 DMRT2Q9Y5R5 561 aa32.2■■■□□ 2.74
VRK2-202ENST00000412104 WWC1Q8IX03 1113 aa32.19■■■□□ 2.74
VRK2-202ENST00000412104 PPIP5K1Q6PFW1 1433 aa32.19■■■□□ 2.74
VRK2-202ENST00000412104 LTKP29376 864 aa32.18■■■□□ 2.74
VRK2-202ENST00000412104 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
VRK2-202ENST00000412104 TCP11L2Q8N4U5 519 aa32.17■■■□□ 2.74
VRK2-202ENST00000412104 CPSF1Q10570 1443 aaKnown RBP32.16■■■□□ 2.74
VRK2-202ENST00000412104 ADGRB2O60241 1585 aa32.16■■■□□ 2.74
VRK2-202ENST00000412104 SLIT1O75093 1534 aa32.16■■■□□ 2.74
VRK2-202ENST00000412104 ROBO2Q9HCK4 1378 aa32.15■■■□□ 2.74
VRK2-202ENST00000412104 CDC42BPGQ6DT37 1551 aa32.14■■■□□ 2.74
VRK2-202ENST00000412104 U2AF1L5P0DN76 240 aaPredicted RBP32.14■■■□□ 2.74
VRK2-202ENST00000412104 U2AF1Q01081 240 aaKnown RBP eCLIP32.14■■■□□ 2.74
VRK2-202ENST00000412104 ARHGAP23Q9P227 1491 aa32.14■■■□□ 2.74
VRK2-202ENST00000412104 RRP7AQ9Y3A4 280 aaKnown RBP32.13■■■□□ 2.73
VRK2-202ENST00000412104 CRBNQ96SW2 442 aa32.12■■■□□ 2.73
VRK2-202ENST00000412104 PHF23Q9BUL5 403 aaPredicted RBP32.12■■■□□ 2.73
VRK2-202ENST00000412104 EDC4Q6P2E9 1401 aaKnown RBP32.12■■■□□ 2.73
VRK2-202ENST00000412104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.12■■■□□ 2.73
VRK2-202ENST00000412104 MON2Q7Z3U7 1717 aa32.11■■■□□ 2.73
VRK2-202ENST00000412104 NEUROD2Q15784 382 aa32.11■■■□□ 2.73
VRK2-202ENST00000412104 NUDT16Q96DE0 195 aaKnown RBP32.11■■■□□ 2.73
VRK2-202ENST00000412104 AKAP12Q02952 1782 aa32.09■■■□□ 2.73
VRK2-202ENST00000412104 C20orf194Q5TEA3 1177 aa32.09■■■□□ 2.73
VRK2-202ENST00000412104 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms