RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 RBM6P78332 1123 aaKnown RBP13.67□□□□□ -0.22
MRPL48-204ENST00000411840 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
MRPL48-204ENST00000411840 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
MRPL48-204ENST00000411840 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
MRPL48-204ENST00000411840 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
MRPL48-204ENST00000411840 KIF1BO60333 1816 aa13.64□□□□□ -0.23
MRPL48-204ENST00000411840 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
MRPL48-204ENST00000411840 STK26Q9P289 416 aa13.63□□□□□ -0.23
MRPL48-204ENST00000411840 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
MRPL48-204ENST00000411840 USP21Q9UK80 565 aa13.62□□□□□ -0.23
MRPL48-204ENST00000411840 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
MRPL48-204ENST00000411840 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
MRPL48-204ENST00000411840 RGS12O14924 1447 aa13.61□□□□□ -0.23
MRPL48-204ENST00000411840 LAMC1P11047 1609 aa13.61□□□□□ -0.23
MRPL48-204ENST00000411840 CCDC144AA2RUR9 1427 aa13.6□□□□□ -0.23
MRPL48-204ENST00000411840 FOXO3O43524 673 aa13.6□□□□□ -0.23
MRPL48-204ENST00000411840 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
MRPL48-204ENST00000411840 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
MRPL48-204ENST00000411840 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
MRPL48-204ENST00000411840 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
MRPL48-204ENST00000411840 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.23
MRPL48-204ENST00000411840 SPATA31E1Q6ZUB1 1445 aa13.58□□□□□ -0.24
MRPL48-204ENST00000411840 XPCQ01831 940 aaPredicted RBP13.58□□□□□ -0.24
MRPL48-204ENST00000411840 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
MRPL48-204ENST00000411840 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
MRPL48-204ENST00000411840 PPLO60437 1756 aa13.56□□□□□ -0.24
MRPL48-204ENST00000411840 TECPR2O15040 1411 aa13.56□□□□□ -0.24
MRPL48-204ENST00000411840 PXDNQ92626 1479 aa13.55□□□□□ -0.24
MRPL48-204ENST00000411840 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
MRPL48-204ENST00000411840 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
MRPL48-204ENST00000411840 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
MRPL48-204ENST00000411840 MYOM2P54296 1465 aa13.55□□□□□ -0.24
MRPL48-204ENST00000411840 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
MRPL48-204ENST00000411840 ATRNO75882 1429 aa13.54□□□□□ -0.24
MRPL48-204ENST00000411840 BCL9LQ86UU0 1499 aa13.54□□□□□ -0.24
MRPL48-204ENST00000411840 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
MRPL48-204ENST00000411840 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
MRPL48-204ENST00000411840 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
MRPL48-204ENST00000411840 COL22A1Q8NFW1 1626 aaPredicted RBP13.53□□□□□ -0.24
MRPL48-204ENST00000411840 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
MRPL48-204ENST00000411840 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
MRPL48-204ENST00000411840 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
MRPL48-204ENST00000411840 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
MRPL48-204ENST00000411840 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
MRPL48-204ENST00000411840 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
MRPL48-204ENST00000411840 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
MRPL48-204ENST00000411840 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
MRPL48-204ENST00000411840 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
MRPL48-204ENST00000411840 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
MRPL48-204ENST00000411840 PSME1Q06323 249 aa13.48□□□□□ -0.25
MRPL48-204ENST00000411840 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
MRPL48-204ENST00000411840 EP400Q96L91 3159 aa13.47□□□□□ -0.25
MRPL48-204ENST00000411840 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
MRPL48-204ENST00000411840 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
MRPL48-204ENST00000411840 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
MRPL48-204ENST00000411840 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
MRPL48-204ENST00000411840 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
MRPL48-204ENST00000411840 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
MRPL48-204ENST00000411840 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
MRPL48-204ENST00000411840 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
MRPL48-204ENST00000411840 POGKQ9P215 609 aa13.45□□□□□ -0.26
MRPL48-204ENST00000411840 SLIT2O94813 1529 aa13.44□□□□□ -0.26
MRPL48-204ENST00000411840 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
MRPL48-204ENST00000411840 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
MRPL48-204ENST00000411840 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
MRPL48-204ENST00000411840 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
MRPL48-204ENST00000411840 TNS3Q68CZ2 1445 aa13.43□□□□□ -0.26
MRPL48-204ENST00000411840 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
MRPL48-204ENST00000411840 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
MRPL48-204ENST00000411840 VPS72Q15906 364 aa13.42□□□□□ -0.26
MRPL48-204ENST00000411840 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
MRPL48-204ENST00000411840 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
MRPL48-204ENST00000411840 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
MRPL48-204ENST00000411840 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
MRPL48-204ENST00000411840 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
MRPL48-204ENST00000411840 RAB3GAP2Q9H2M9 1393 aa13.41□□□□□ -0.26
MRPL48-204ENST00000411840 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
MRPL48-204ENST00000411840 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
MRPL48-204ENST00000411840 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
MRPL48-204ENST00000411840 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
MRPL48-204ENST00000411840 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
MRPL48-204ENST00000411840 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
MRPL48-204ENST00000411840 GLI3P10071 1580 aa13.39□□□□□ -0.27
MRPL48-204ENST00000411840 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
MRPL48-204ENST00000411840 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
MRPL48-204ENST00000411840 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
MRPL48-204ENST00000411840 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
MRPL48-204ENST00000411840 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
MRPL48-204ENST00000411840 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
MRPL48-204ENST00000411840 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
MRPL48-204ENST00000411840 SF3B2Q13435 895 aaKnown RBP13.36□□□□□ -0.27
MRPL48-204ENST00000411840 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
MRPL48-204ENST00000411840 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
MRPL48-204ENST00000411840 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms