RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 PIK3R4Q99570 1358 aa26.24■■□□□ 1.79
LMO2-203ENST00000411482 PANK3Q9H999 370 aa26.24■■□□□ 1.79
LMO2-203ENST00000411482 NWD1Q149M9 1564 aa26.23■■□□□ 1.79
LMO2-203ENST00000411482 CPS1P31327 1500 aa26.23■■□□□ 1.79
LMO2-203ENST00000411482 PNISRQ8TF01 805 aaKnown RBP26.2■■□□□ 1.79
LMO2-203ENST00000411482 LRRC7Q96NW7 1537 aa26.2■■□□□ 1.78
LMO2-203ENST00000411482 FAM9BQ8IZU0 186 aa26.19■■□□□ 1.78
LMO2-203ENST00000411482 XIRP1Q702N8 1843 aaKnown RBP26.19■■□□□ 1.78
LMO2-203ENST00000411482 AMOTL2Q9Y2J4 779 aa26.18■■□□□ 1.78
LMO2-203ENST00000411482 ZBED9Q6R2W3 1325 aa26.17■■□□□ 1.78
LMO2-203ENST00000411482 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
LMO2-203ENST00000411482 XRN1Q8IZH2 1706 aaKnown RBP26.16■■□□□ 1.78
LMO2-203ENST00000411482 NPC1L1Q9UHC9 1359 aa26.16■■□□□ 1.78
LMO2-203ENST00000411482 MYOM1P52179 1685 aa26.16■■□□□ 1.78
LMO2-203ENST00000411482 NLRP13Q86W25 1043 aa26.15■■□□□ 1.78
LMO2-203ENST00000411482 ASXL1Q8IXJ9 1541 aa26.15■■□□□ 1.78
LMO2-203ENST00000411482 CENPJQ9HC77 1338 aaPredicted RBP26.15■■□□□ 1.78
LMO2-203ENST00000411482 NKTRP30414 1462 aaKnown RBP26.14■■□□□ 1.78
LMO2-203ENST00000411482 TMC1Q8TDI8 760 aa26.14■■□□□ 1.77
LMO2-203ENST00000411482 TMEM132EQ6IEE7 984 aa26.13■■□□□ 1.77
LMO2-203ENST00000411482 PUS7Q96PZ0 661 aaKnown RBP26.12■■□□□ 1.77
LMO2-203ENST00000411482 IQSEC2Q5JU85 1478 aa26.12■■□□□ 1.77
LMO2-203ENST00000411482 PROSER2Q86WR7 435 aaPredicted RBP26.11■■□□□ 1.77
LMO2-203ENST00000411482 RBM33Q96EV2 1170 aaKnown RBP26.11■■□□□ 1.77
LMO2-203ENST00000411482 INSRP06213 1382 aa26.1■■□□□ 1.77
LMO2-203ENST00000411482 SUPT16HQ9Y5B9 1047 aaKnown RBP26.09■■□□□ 1.77
LMO2-203ENST00000411482 TMEM94Q12767 1356 aa26.09■■□□□ 1.77
LMO2-203ENST00000411482 AMER1Q5JTC6 1135 aaPredicted RBP26.09■■□□□ 1.77
LMO2-203ENST00000411482 KNSTRNQ9Y448 316 aa26.06■■□□□ 1.76
LMO2-203ENST00000411482 QRICH2Q9H0J4 1663 aa26.05■■□□□ 1.76
LMO2-203ENST00000411482 TRAK1Q9UPV9 953 aa26.05■■□□□ 1.76
LMO2-203ENST00000411482 ABCC11Q96J66 1382 aa26.04■■□□□ 1.76
LMO2-203ENST00000411482 ROBO2Q9HCK4 1378 aa26.04■■□□□ 1.76
LMO2-203ENST00000411482 YTHDC2Q9H6S0 1430 aaKnown RBP26.04■■□□□ 1.76
LMO2-203ENST00000411482 CNGB1Q14028 1251 aaPredicted RBP26.04■■□□□ 1.76
LMO2-203ENST00000411482 ARHGEF28Q8N1W1 1705 aaKnown RBP26.03■■□□□ 1.76
LMO2-203ENST00000411482 TECPR2O15040 1411 aa26.03■■□□□ 1.76
LMO2-203ENST00000411482 STK26Q9P289 416 aa26.02■■□□□ 1.76
LMO2-203ENST00000411482 PTCH1Q13635 1447 aa26.01■■□□□ 1.75
LMO2-203ENST00000411482 CC2D1BQ5T0F9 858 aaKnown RBP26.01■■□□□ 1.75
LMO2-203ENST00000411482 NCOA3Q9Y6Q9 1424 aa26.01■■□□□ 1.75
LMO2-203ENST00000411482 KNDC1Q76NI1 1749 aa26■■□□□ 1.75
LMO2-203ENST00000411482 SIRT1Q96EB6 747 aa25.96■■□□□ 1.75
LMO2-203ENST00000411482 WAPLQ7Z5K2 1190 aa25.95■■□□□ 1.74
LMO2-203ENST00000411482 FBXO41Q8TF61 875 aa25.95■■□□□ 1.74
LMO2-203ENST00000411482 CARD14Q9BXL6 1004 aa25.94■■□□□ 1.74
LMO2-203ENST00000411482 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.94■■□□□ 1.74
LMO2-203ENST00000411482 PLEKHH1Q9ULM0 1364 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 EVC2Q86UK5 1308 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 UBAP1LF5GYI3 381 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 PPP2R1AP30153 589 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 C19orf44Q9H6X5 657 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
LMO2-203ENST00000411482 FAM135BQ49AJ0 1406 aa25.92■■□□□ 1.74
LMO2-203ENST00000411482 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
LMO2-203ENST00000411482 NALCNQ8IZF0 1738 aa25.92■■□□□ 1.74
LMO2-203ENST00000411482 DLC1Q96QB1 1528 aa25.91■■□□□ 1.74
LMO2-203ENST00000411482 MSH6P52701 1360 aa25.9■■□□□ 1.74
LMO2-203ENST00000411482 NEFLP07196 543 aa25.9■■□□□ 1.74
LMO2-203ENST00000411482 TOM1O60784 492 aa25.89■■□□□ 1.74
LMO2-203ENST00000411482 FKBP8Q14318 412 aa25.89■■□□□ 1.74
LMO2-203ENST00000411482 ADGRL3Q9HAR2 1447 aa25.89■■□□□ 1.74
LMO2-203ENST00000411482 BLMP54132 1417 aaPredicted RBP25.88■■□□□ 1.73
LMO2-203ENST00000411482 C14orf37Q86TY3 774 aa25.88■■□□□ 1.73
LMO2-203ENST00000411482 USP32Q8NFA0 1604 aa25.87■■□□□ 1.73
LMO2-203ENST00000411482 NINLQ9Y2I6 1382 aa25.86■■□□□ 1.73
LMO2-203ENST00000411482 PRAM1Q96QH2 718 aa25.86■■□□□ 1.73
LMO2-203ENST00000411482 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
LMO2-203ENST00000411482 DCCP43146 1447 aa25.84■■□□□ 1.73
LMO2-203ENST00000411482 SLC12A5Q9H2X9 1139 aa25.83■■□□□ 1.73
LMO2-203ENST00000411482 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.72
LMO2-203ENST00000411482 CADPS2Q86UW7 1296 aa25.82■■□□□ 1.72
LMO2-203ENST00000411482 SLAIN2Q9P270 581 aa25.82■■□□□ 1.72
LMO2-203ENST00000411482 NUDCQ9Y266 331 aa25.82■■□□□ 1.72
LMO2-203ENST00000411482 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
LMO2-203ENST00000411482 ANKRD36BQ8N2N9 1353 aa25.81■■□□□ 1.72
LMO2-203ENST00000411482 ATF3P18847 181 aa25.8■■□□□ 1.72
LMO2-203ENST00000411482 NSD3Q9BZ95 1437 aa25.79■■□□□ 1.72
LMO2-203ENST00000411482 PIP4K2BP78356 416 aa25.79■■□□□ 1.72
LMO2-203ENST00000411482 POGKQ9P215 609 aa25.79■■□□□ 1.72
LMO2-203ENST00000411482 PDE3BQ13370 1112 aa25.78■■□□□ 1.72
LMO2-203ENST00000411482 MST1RQ04912 1400 aa25.77■■□□□ 1.72
LMO2-203ENST00000411482 ATAD2Q6PL18 1390 aa25.77■■□□□ 1.72
LMO2-203ENST00000411482 CDC42BPGQ6DT37 1551 aa25.77■■□□□ 1.72
LMO2-203ENST00000411482 RNF123Q5XPI4 1314 aa25.76■■□□□ 1.71
LMO2-203ENST00000411482 NSD2O96028 1365 aa25.75■■□□□ 1.71
LMO2-203ENST00000411482 CABP2Q9NPB3 220 aa25.73■■□□□ 1.71
LMO2-203ENST00000411482 MINK1Q8N4C8 1332 aaPredicted RBP25.73■■□□□ 1.71
LMO2-203ENST00000411482 ADAMTS8Q9UP79 889 aa25.73■■□□□ 1.71
LMO2-203ENST00000411482 POLR3AO14802 1390 aaPredicted RBP25.72■■□□□ 1.71
LMO2-203ENST00000411482 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
LMO2-203ENST00000411482 ADGRB2O60241 1585 aa25.72■■□□□ 1.71
LMO2-203ENST00000411482 ROBO1Q9Y6N7 1651 aa25.72■■□□□ 1.71
LMO2-203ENST00000411482 FMN2Q9NZ56 1722 aa25.71■■□□□ 1.71
LMO2-203ENST00000411482 C1orf167Q5SNV9 1468 aa25.71■■□□□ 1.71
LMO2-203ENST00000411482 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
LMO2-203ENST00000411482 WDR43Q15061 677 aaKnown RBP eCLIP25.68■■□□□ 1.7
LMO2-203ENST00000411482 BRINP3Q76B58 766 aa25.68■■□□□ 1.7
LMO2-203ENST00000411482 SRPK2P78362 688 aaKnown RBP25.67■■□□□ 1.7
LMO2-203ENST00000411482 CD163L1Q9NR16 1453 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms