RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 STK26Q9P289 416 aa13.27□□□□□ -0.29
SNORD88A-201ENST00000408314 DLC1Q96QB1 1528 aa13.24□□□□□ -0.29
SNORD88A-201ENST00000408314 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
SNORD88A-201ENST00000408314 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
SNORD88A-201ENST00000408314 TMEM132EQ6IEE7 984 aa13.23□□□□□ -0.29
SNORD88A-201ENST00000408314 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 SOS2Q07890 1332 aaPredicted RBP13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 LRP6O75581 1613 aa13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
SNORD88A-201ENST00000408314 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
SNORD88A-201ENST00000408314 EIF3AQ14152 1382 aaKnown RBP13.21□□□□□ -0.29
SNORD88A-201ENST00000408314 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
SNORD88A-201ENST00000408314 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
SNORD88A-201ENST00000408314 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
SNORD88A-201ENST00000408314 ORAI2Q96SN7 254 aa13.2□□□□□ -0.3
SNORD88A-201ENST00000408314 POGKQ9P215 609 aa13.2□□□□□ -0.3
SNORD88A-201ENST00000408314 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
SNORD88A-201ENST00000408314 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
SNORD88A-201ENST00000408314 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
SNORD88A-201ENST00000408314 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
SNORD88A-201ENST00000408314 PLEKHH1Q9ULM0 1364 aa13.19□□□□□ -0.3
SNORD88A-201ENST00000408314 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
SNORD88A-201ENST00000408314 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
SNORD88A-201ENST00000408314 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
SNORD88A-201ENST00000408314 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
SNORD88A-201ENST00000408314 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
SNORD88A-201ENST00000408314 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
SNORD88A-201ENST00000408314 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
SNORD88A-201ENST00000408314 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
SNORD88A-201ENST00000408314 PXDNQ92626 1479 aa13.16□□□□□ -0.3
SNORD88A-201ENST00000408314 AFF2P51816 1311 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 FOXO3O43524 673 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 PSME1Q06323 249 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
SNORD88A-201ENST00000408314 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
SNORD88A-201ENST00000408314 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNORD88A-201ENST00000408314 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
SNORD88A-201ENST00000408314 RXRBP28702 533 aa13.12□□□□□ -0.31
SNORD88A-201ENST00000408314 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
SNORD88A-201ENST00000408314 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
SNORD88A-201ENST00000408314 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
SNORD88A-201ENST00000408314 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
SNORD88A-201ENST00000408314 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
SNORD88A-201ENST00000408314 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
SNORD88A-201ENST00000408314 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
SNORD88A-201ENST00000408314 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
SNORD88A-201ENST00000408314 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
SNORD88A-201ENST00000408314 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
SNORD88A-201ENST00000408314 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
SNORD88A-201ENST00000408314 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
SNORD88A-201ENST00000408314 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
SNORD88A-201ENST00000408314 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
SNORD88A-201ENST00000408314 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
SNORD88A-201ENST00000408314 RGPD8O14715 1765 aaPredicted RBP13.07□□□□□ -0.32
SNORD88A-201ENST00000408314 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
SNORD88A-201ENST00000408314 USP21Q9UK80 565 aa13.07□□□□□ -0.32
SNORD88A-201ENST00000408314 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
SNORD88A-201ENST00000408314 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
SNORD88A-201ENST00000408314 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SNORD88A-201ENST00000408314 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
SNORD88A-201ENST00000408314 HIRIP3Q9BW71 556 aaPredicted RBP13.06□□□□□ -0.32
SNORD88A-201ENST00000408314 QTRT2Q9H974 415 aaKnown RBP13.06□□□□□ -0.32
SNORD88A-201ENST00000408314 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
SNORD88A-201ENST00000408314 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 PMFBP1Q8TBY8 1022 aa13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 ATRNO75882 1429 aa13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 ATP7BP35670 1465 aa13.03□□□□□ -0.32
SNORD88A-201ENST00000408314 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
SNORD88A-201ENST00000408314 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.33
SNORD88A-201ENST00000408314 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
SNORD88A-201ENST00000408314 RGS12O14924 1447 aa13.01□□□□□ -0.33
SNORD88A-201ENST00000408314 TRPM3Q9HCF6 1732 aaPredicted RBP13□□□□□ -0.33
SNORD88A-201ENST00000408314 NEUROD1Q13562 356 aa13□□□□□ -0.33
SNORD88A-201ENST00000408314 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
SNORD88A-201ENST00000408314 CDK19Q9BWU1 502 aa13□□□□□ -0.33
SNORD88A-201ENST00000408314 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
SNORD88A-201ENST00000408314 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 SLIT2O94813 1529 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 NBPF1Q3BBV0 1214 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
SNORD88A-201ENST00000408314 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
SNORD88A-201ENST00000408314 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
SNORD88A-201ENST00000408314 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
SNORD88A-201ENST00000408314 QRICH2Q9H0J4 1663 aa12.98□□□□□ -0.33
SNORD88A-201ENST00000408314 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
SNORD88A-201ENST00000408314 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
SNORD88A-201ENST00000408314 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms