RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 METP08581 1390 aa14.03□□□□□ -0.16
SNORD88C-201ENST00000408061 PARD3Q8TEW0 1356 aa14.03□□□□□ -0.16
SNORD88C-201ENST00000408061 BRD4O60885 1362 aaPredicted RBP14.02□□□□□ -0.17
SNORD88C-201ENST00000408061 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
SNORD88C-201ENST00000408061 NLRP13Q86W25 1043 aa14□□□□□ -0.17
SNORD88C-201ENST00000408061 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
SNORD88C-201ENST00000408061 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
SNORD88C-201ENST00000408061 TERF2IPQ9NYB0 399 aa13.99□□□□□ -0.17
SNORD88C-201ENST00000408061 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
SNORD88C-201ENST00000408061 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
SNORD88C-201ENST00000408061 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
SNORD88C-201ENST00000408061 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
SNORD88C-201ENST00000408061 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
SNORD88C-201ENST00000408061 NSD2O96028 1365 aa13.97□□□□□ -0.17
SNORD88C-201ENST00000408061 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
SNORD88C-201ENST00000408061 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
SNORD88C-201ENST00000408061 INSRP06213 1382 aa13.96□□□□□ -0.17
SNORD88C-201ENST00000408061 MINK1Q8N4C8 1332 aaPredicted RBP13.96□□□□□ -0.17
SNORD88C-201ENST00000408061 WASLO00401 505 aaPredicted RBP13.96□□□□□ -0.17
SNORD88C-201ENST00000408061 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
SNORD88C-201ENST00000408061 ADGRB2O60241 1585 aa13.96□□□□□ -0.18
SNORD88C-201ENST00000408061 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
SNORD88C-201ENST00000408061 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
SNORD88C-201ENST00000408061 AMOTL2Q9Y2J4 779 aa13.95□□□□□ -0.18
SNORD88C-201ENST00000408061 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
SNORD88C-201ENST00000408061 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNORD88C-201ENST00000408061 HDGFL2Q7Z4V5 671 aaPredicted RBP13.94□□□□□ -0.18
SNORD88C-201ENST00000408061 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
SNORD88C-201ENST00000408061 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
SNORD88C-201ENST00000408061 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
SNORD88C-201ENST00000408061 ATP7BP35670 1465 aa13.93□□□□□ -0.18
SNORD88C-201ENST00000408061 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
SNORD88C-201ENST00000408061 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
SNORD88C-201ENST00000408061 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
SNORD88C-201ENST00000408061 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
SNORD88C-201ENST00000408061 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
SNORD88C-201ENST00000408061 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
SNORD88C-201ENST00000408061 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
SNORD88C-201ENST00000408061 PTPRUQ92729 1446 aa13.91□□□□□ -0.18
SNORD88C-201ENST00000408061 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
SNORD88C-201ENST00000408061 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
SNORD88C-201ENST00000408061 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
SNORD88C-201ENST00000408061 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.19
SNORD88C-201ENST00000408061 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
SNORD88C-201ENST00000408061 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
SNORD88C-201ENST00000408061 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
SNORD88C-201ENST00000408061 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
SNORD88C-201ENST00000408061 KCNA6P17658 529 aa13.87□□□□□ -0.19
SNORD88C-201ENST00000408061 MORC1Q86VD1 984 aa13.87□□□□□ -0.19
SNORD88C-201ENST00000408061 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
SNORD88C-201ENST00000408061 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
SNORD88C-201ENST00000408061 A0A1W2PP64 1363 aa13.86□□□□□ -0.19
SNORD88C-201ENST00000408061 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
SNORD88C-201ENST00000408061 CPSF1Q10570 1443 aaKnown RBP13.86□□□□□ -0.19
SNORD88C-201ENST00000408061 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
SNORD88C-201ENST00000408061 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
SNORD88C-201ENST00000408061 CD163L1Q9NR16 1453 aa13.85□□□□□ -0.19
SNORD88C-201ENST00000408061 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
SNORD88C-201ENST00000408061 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
SNORD88C-201ENST00000408061 EDC4Q6P2E9 1401 aaKnown RBP13.84□□□□□ -0.19
SNORD88C-201ENST00000408061 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNORD88C-201ENST00000408061 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.19
SNORD88C-201ENST00000408061 CDC42BPGQ6DT37 1551 aa13.83□□□□□ -0.19
SNORD88C-201ENST00000408061 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
SNORD88C-201ENST00000408061 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
SNORD88C-201ENST00000408061 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
SNORD88C-201ENST00000408061 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
SNORD88C-201ENST00000408061 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
SNORD88C-201ENST00000408061 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
SNORD88C-201ENST00000408061 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
SNORD88C-201ENST00000408061 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
SNORD88C-201ENST00000408061 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
SNORD88C-201ENST00000408061 FYB1O15117 783 aa13.81□□□□□ -0.2
SNORD88C-201ENST00000408061 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
SNORD88C-201ENST00000408061 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
SNORD88C-201ENST00000408061 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
SNORD88C-201ENST00000408061 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
SNORD88C-201ENST00000408061 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
SNORD88C-201ENST00000408061 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNORD88C-201ENST00000408061 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
SNORD88C-201ENST00000408061 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
SNORD88C-201ENST00000408061 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
SNORD88C-201ENST00000408061 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
SNORD88C-201ENST00000408061 ACEP12821 1306 aa13.76□□□□□ -0.21
SNORD88C-201ENST00000408061 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
SNORD88C-201ENST00000408061 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
SNORD88C-201ENST00000408061 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
SNORD88C-201ENST00000408061 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
SNORD88C-201ENST00000408061 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 USP6P35125 1406 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 MTHFSP49914 203 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 COG3Q96JB2 828 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
SNORD88C-201ENST00000408061 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms