RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 FMN2Q9NZ56 1722 aa20.28■□□□□ 0.84
VAMP2-202ENST00000404970 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
VAMP2-202ENST00000404970 SLAIN2Q9P270 581 aa20.26■□□□□ 0.83
VAMP2-202ENST00000404970 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
VAMP2-202ENST00000404970 HSPA1LP34931 641 aa20.25■□□□□ 0.83
VAMP2-202ENST00000404970 ADGRB2O60241 1585 aa20.25■□□□□ 0.83
VAMP2-202ENST00000404970 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
VAMP2-202ENST00000404970 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
VAMP2-202ENST00000404970 ATF3P18847 181 aa20.24■□□□□ 0.83
VAMP2-202ENST00000404970 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
VAMP2-202ENST00000404970 SIRT1Q96EB6 747 aa20.24■□□□□ 0.83
VAMP2-202ENST00000404970 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
VAMP2-202ENST00000404970 NHSL1Q5SYE7 1610 aa20.22■□□□□ 0.83
VAMP2-202ENST00000404970 C1orf167Q5SNV9 1468 aa20.22■□□□□ 0.83
VAMP2-202ENST00000404970 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
VAMP2-202ENST00000404970 USP32Q8NFA0 1604 aa20.22■□□□□ 0.83
VAMP2-202ENST00000404970 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
VAMP2-202ENST00000404970 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
VAMP2-202ENST00000404970 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
VAMP2-202ENST00000404970 RALGAPBQ86X10 1494 aa20.2■□□□□ 0.82
VAMP2-202ENST00000404970 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
VAMP2-202ENST00000404970 QRICH2Q9H0J4 1663 aa20.2■□□□□ 0.82
VAMP2-202ENST00000404970 BRINP3Q76B58 766 aa20.18■□□□□ 0.82
VAMP2-202ENST00000404970 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
VAMP2-202ENST00000404970 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
VAMP2-202ENST00000404970 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
VAMP2-202ENST00000404970 POGKQ9P215 609 aa20.16■□□□□ 0.82
VAMP2-202ENST00000404970 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
VAMP2-202ENST00000404970 MINK1Q8N4C8 1332 aaPredicted RBP20.15■□□□□ 0.82
VAMP2-202ENST00000404970 ORAI2Q96SN7 254 aa20.14■□□□□ 0.81
VAMP2-202ENST00000404970 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
VAMP2-202ENST00000404970 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
VAMP2-202ENST00000404970 TULP4Q9NRJ4 1543 aa20.11■□□□□ 0.81
VAMP2-202ENST00000404970 TOPAZ1Q8N9V7 1692 aa20.1■□□□□ 0.81
VAMP2-202ENST00000404970 KIF1AQ12756 1690 aa20.09■□□□□ 0.81
VAMP2-202ENST00000404970 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
VAMP2-202ENST00000404970 ATP7BP35670 1465 aa20.08■□□□□ 0.8
VAMP2-202ENST00000404970 SHPRHQ149N8 1683 aa20.08■□□□□ 0.8
VAMP2-202ENST00000404970 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
VAMP2-202ENST00000404970 ANKARQ7Z5J8 1434 aa20.06■□□□□ 0.8
VAMP2-202ENST00000404970 PXDNQ92626 1479 aa20.06■□□□□ 0.8
VAMP2-202ENST00000404970 ITSN1Q15811 1721 aa20.06■□□□□ 0.8
VAMP2-202ENST00000404970 MED1Q15648 1581 aaPredicted RBP20.06■□□□□ 0.8
VAMP2-202ENST00000404970 WASLO00401 505 aaPredicted RBP20.05■□□□□ 0.8
VAMP2-202ENST00000404970 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
VAMP2-202ENST00000404970 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
VAMP2-202ENST00000404970 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
VAMP2-202ENST00000404970 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
VAMP2-202ENST00000404970 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
VAMP2-202ENST00000404970 CDK19Q9BWU1 502 aa20■□□□□ 0.79
VAMP2-202ENST00000404970 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
VAMP2-202ENST00000404970 XPCQ01831 940 aaPredicted RBP19.99■□□□□ 0.79
VAMP2-202ENST00000404970 LRP6O75581 1613 aa19.99■□□□□ 0.79
VAMP2-202ENST00000404970 FOXO3O43524 673 aa19.99■□□□□ 0.79
VAMP2-202ENST00000404970 JCADQ9P266 1359 aa19.98■□□□□ 0.79
VAMP2-202ENST00000404970 PHF8Q9UPP1 1060 aa19.98■□□□□ 0.79
VAMP2-202ENST00000404970 COL22A1Q8NFW1 1626 aaPredicted RBP19.97■□□□□ 0.79
VAMP2-202ENST00000404970 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
VAMP2-202ENST00000404970 PMFBP1Q8TBY8 1022 aa19.96■□□□□ 0.79
VAMP2-202ENST00000404970 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
VAMP2-202ENST00000404970 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
VAMP2-202ENST00000404970 NPHP3Q7Z494 1330 aa19.95■□□□□ 0.78
VAMP2-202ENST00000404970 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
VAMP2-202ENST00000404970 USP47Q96K76 1375 aa19.94■□□□□ 0.78
VAMP2-202ENST00000404970 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
VAMP2-202ENST00000404970 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
VAMP2-202ENST00000404970 TESK2Q96S53 571 aa19.92■□□□□ 0.78
VAMP2-202ENST00000404970 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
VAMP2-202ENST00000404970 AKAP12Q02952 1782 aa19.9■□□□□ 0.78
VAMP2-202ENST00000404970 PPIP5K1Q6PFW1 1433 aa19.9■□□□□ 0.78
VAMP2-202ENST00000404970 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
VAMP2-202ENST00000404970 KRT28Q7Z3Y7 464 aa19.9■□□□□ 0.78
VAMP2-202ENST00000404970 LRRC59Q96AG4 307 aaKnown RBP19.9■□□□□ 0.78
VAMP2-202ENST00000404970 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
VAMP2-202ENST00000404970 CRYBG1Q9Y4K1 1723 aa19.9■□□□□ 0.78
VAMP2-202ENST00000404970 POLR3AO14802 1390 aaPredicted RBP19.89■□□□□ 0.78
VAMP2-202ENST00000404970 TNS3Q68CZ2 1445 aa19.88■□□□□ 0.77
VAMP2-202ENST00000404970 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
VAMP2-202ENST00000404970 SPATA31A3Q5VYP0 1347 aa19.87■□□□□ 0.77
VAMP2-202ENST00000404970 PLEKHG3A1L390 1219 aa19.86■□□□□ 0.77
VAMP2-202ENST00000404970 MARF1Q9Y4F3 1742 aaKnown RBP19.86■□□□□ 0.77
VAMP2-202ENST00000404970 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
VAMP2-202ENST00000404970 ACEP12821 1306 aa19.85■□□□□ 0.77
VAMP2-202ENST00000404970 SBNO1A3KN83 1393 aa19.85■□□□□ 0.77
VAMP2-202ENST00000404970 NRKQ7Z2Y5 1582 aa19.85■□□□□ 0.77
VAMP2-202ENST00000404970 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
VAMP2-202ENST00000404970 NGDNQ8NEJ9 315 aaKnown RBP19.84■□□□□ 0.77
VAMP2-202ENST00000404970 CD163L1Q9NR16 1453 aa19.83■□□□□ 0.77
VAMP2-202ENST00000404970 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.76
VAMP2-202ENST00000404970 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.76
VAMP2-202ENST00000404970 PSME1Q06323 249 aa19.83■□□□□ 0.76
VAMP2-202ENST00000404970 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.76
VAMP2-202ENST00000404970 CABP1Q9NZU7 370 aa19.83■□□□□ 0.76
VAMP2-202ENST00000404970 MYOM1P52179 1685 aa19.83■□□□□ 0.76
VAMP2-202ENST00000404970 RGS17Q9UGC6 210 aaPredicted RBP19.81■□□□□ 0.76
VAMP2-202ENST00000404970 ATAD2Q6PL18 1390 aa19.81■□□□□ 0.76
VAMP2-202ENST00000404970 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
VAMP2-202ENST00000404970 PIK3C2AO00443 1686 aa19.8■□□□□ 0.76
VAMP2-202ENST00000404970 USP6P35125 1406 aa19.79■□□□□ 0.76
VAMP2-202ENST00000404970 CPSF1Q10570 1443 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms