RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 IQSEC2Q5JU85 1478 aa11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
SNRPD3-203ENST00000404603 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
SNRPD3-203ENST00000404603 SETD1AO15047 1707 aaKnown RBP11.85□□□□□ -0.51
SNRPD3-203ENST00000404603 KNDC1Q76NI1 1749 aa11.85□□□□□ -0.51
SNRPD3-203ENST00000404603 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
SNRPD3-203ENST00000404603 CHD2O14647 1828 aaKnown RBP11.84□□□□□ -0.51
SNRPD3-203ENST00000404603 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
SNRPD3-203ENST00000404603 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
SNRPD3-203ENST00000404603 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
SNRPD3-203ENST00000404603 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
SNRPD3-203ENST00000404603 METP08581 1390 aa11.83□□□□□ -0.52
SNRPD3-203ENST00000404603 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
SNRPD3-203ENST00000404603 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
SNRPD3-203ENST00000404603 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
SNRPD3-203ENST00000404603 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
SNRPD3-203ENST00000404603 DCCP43146 1447 aa11.81□□□□□ -0.52
SNRPD3-203ENST00000404603 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
SNRPD3-203ENST00000404603 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
SNRPD3-203ENST00000404603 POGKQ9P215 609 aa11.81□□□□□ -0.52
SNRPD3-203ENST00000404603 STRCP1A6NGW2 1772 aa11.81□□□□□ -0.52
SNRPD3-203ENST00000404603 MSH6P52701 1360 aa11.8□□□□□ -0.52
SNRPD3-203ENST00000404603 C14orf37Q86TY3 774 aa11.8□□□□□ -0.52
SNRPD3-203ENST00000404603 ASXL1Q8IXJ9 1541 aa11.79□□□□□ -0.52
SNRPD3-203ENST00000404603 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
SNRPD3-203ENST00000404603 STK26Q9P289 416 aa11.78□□□□□ -0.52
SNRPD3-203ENST00000404603 CENPJQ9HC77 1338 aaPredicted RBP11.78□□□□□ -0.52
SNRPD3-203ENST00000404603 SBNO2Q9Y2G9 1366 aa11.78□□□□□ -0.52
SNRPD3-203ENST00000404603 PTPRUQ92729 1446 aa11.77□□□□□ -0.52
SNRPD3-203ENST00000404603 LRRC7Q96NW7 1537 aa11.77□□□□□ -0.52
SNRPD3-203ENST00000404603 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 TMEM94Q12767 1356 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
SNRPD3-203ENST00000404603 ATF3P18847 181 aa11.76□□□□□ -0.53
SNRPD3-203ENST00000404603 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNRPD3-203ENST00000404603 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
SNRPD3-203ENST00000404603 FBXO41Q8TF61 875 aa11.76□□□□□ -0.53
SNRPD3-203ENST00000404603 ARHGEF28Q8N1W1 1705 aaKnown RBP11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 TOM1O60784 492 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 PRAM1Q96QH2 718 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 USP47Q96K76 1375 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
SNRPD3-203ENST00000404603 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNRPD3-203ENST00000404603 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
SNRPD3-203ENST00000404603 ADGRB2O60241 1585 aa11.74□□□□□ -0.53
SNRPD3-203ENST00000404603 EVC2Q86UK5 1308 aa11.73□□□□□ -0.53
SNRPD3-203ENST00000404603 TMF1P82094 1093 aa11.71□□□□□ -0.53
SNRPD3-203ENST00000404603 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
SNRPD3-203ENST00000404603 XIRP1Q702N8 1843 aaKnown RBP11.71□□□□□ -0.54
SNRPD3-203ENST00000404603 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
SNRPD3-203ENST00000404603 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
SNRPD3-203ENST00000404603 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
SNRPD3-203ENST00000404603 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
SNRPD3-203ENST00000404603 NINLQ9Y2I6 1382 aa11.69□□□□□ -0.54
SNRPD3-203ENST00000404603 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
SNRPD3-203ENST00000404603 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
SNRPD3-203ENST00000404603 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
SNRPD3-203ENST00000404603 RBM33Q96EV2 1170 aaKnown RBP11.68□□□□□ -0.54
SNRPD3-203ENST00000404603 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.68□□□□□ -0.54
SNRPD3-203ENST00000404603 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
SNRPD3-203ENST00000404603 ST20-MTHFSA0A0A6YYL1 179 aa11.67□□□□□ -0.54
SNRPD3-203ENST00000404603 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
SNRPD3-203ENST00000404603 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNRPD3-203ENST00000404603 PLEKHH1Q9ULM0 1364 aa11.67□□□□□ -0.54
SNRPD3-203ENST00000404603 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
SNRPD3-203ENST00000404603 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
SNRPD3-203ENST00000404603 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
SNRPD3-203ENST00000404603 HAX1O00165 279 aa11.65□□□□□ -0.54
SNRPD3-203ENST00000404603 SLAIN2Q9P270 581 aa11.65□□□□□ -0.54
SNRPD3-203ENST00000404603 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
SNRPD3-203ENST00000404603 KIF1AQ12756 1690 aa11.65□□□□□ -0.55
SNRPD3-203ENST00000404603 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
SNRPD3-203ENST00000404603 MST1RQ04912 1400 aa11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
SNRPD3-203ENST00000404603 PIP4K2BP78356 416 aa11.62□□□□□ -0.55
SNRPD3-203ENST00000404603 TESK2Q96S53 571 aa11.62□□□□□ -0.55
SNRPD3-203ENST00000404603 NPHP3Q7Z494 1330 aa11.61□□□□□ -0.55
SNRPD3-203ENST00000404603 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
SNRPD3-203ENST00000404603 ATP7BP35670 1465 aa11.61□□□□□ -0.55
SNRPD3-203ENST00000404603 PSME1Q06323 249 aa11.6□□□□□ -0.55
SNRPD3-203ENST00000404603 ESCO1Q5FWF5 840 aa11.6□□□□□ -0.55
SNRPD3-203ENST00000404603 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
SNRPD3-203ENST00000404603 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
SNRPD3-203ENST00000404603 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
SNRPD3-203ENST00000404603 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
SNRPD3-203ENST00000404603 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms