RNA–Protein interactions for RNA: ENST00000401980.3

SOD2-204, Transcript of superoxide dismutase 2, humanhuman

TSL 4

Gene SOD2, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-204ENST00000401980 USP21Q9UK80 565 aa18.64■□□□□ 0.57
SOD2-204ENST00000401980 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
SOD2-204ENST00000401980 TRPC5Q9UL62 973 aaPredicted RBP18.63■□□□□ 0.57
SOD2-204ENST00000401980 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
SOD2-204ENST00000401980 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
SOD2-204ENST00000401980 FOXD1Q16676 465 aa18.61■□□□□ 0.57
SOD2-204ENST00000401980 ATRNO75882 1429 aa18.6■□□□□ 0.57
SOD2-204ENST00000401980 ROBO2Q9HCK4 1378 aa18.6■□□□□ 0.57
SOD2-204ENST00000401980 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
SOD2-204ENST00000401980 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
SOD2-204ENST00000401980 EP400Q96L91 3159 aa18.57■□□□□ 0.56
SOD2-204ENST00000401980 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
SOD2-204ENST00000401980 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
SOD2-204ENST00000401980 VGFO15240 615 aaPredicted RBP18.56■□□□□ 0.56
SOD2-204ENST00000401980 PRAG1Q86YV5 1406 aa18.55■□□□□ 0.56
SOD2-204ENST00000401980 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
SOD2-204ENST00000401980 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
SOD2-204ENST00000401980 MYOM2P54296 1465 aa18.54■□□□□ 0.56
SOD2-204ENST00000401980 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
SOD2-204ENST00000401980 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
SOD2-204ENST00000401980 NPHP3Q7Z494 1330 aa18.51■□□□□ 0.55
SOD2-204ENST00000401980 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
SOD2-204ENST00000401980 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
SOD2-204ENST00000401980 PPLO60437 1756 aa18.5■□□□□ 0.55
SOD2-204ENST00000401980 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SOD2-204ENST00000401980 GJD4Q96KN9 370 aaPredicted RBP18.49■□□□□ 0.55
SOD2-204ENST00000401980 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
SOD2-204ENST00000401980 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
SOD2-204ENST00000401980 FOXO3O43524 673 aa18.48■□□□□ 0.55
SOD2-204ENST00000401980 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
SOD2-204ENST00000401980 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
SOD2-204ENST00000401980 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
SOD2-204ENST00000401980 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
SOD2-204ENST00000401980 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
SOD2-204ENST00000401980 GLI3P10071 1580 aa18.43■□□□□ 0.54
SOD2-204ENST00000401980 UNC5CLQ8IV45 518 aa18.43■□□□□ 0.54
SOD2-204ENST00000401980 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
SOD2-204ENST00000401980 RALGAPBQ86X10 1494 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 SLIT2O94813 1529 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 RGL3Q3MIN7 710 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
SOD2-204ENST00000401980 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
SOD2-204ENST00000401980 STK26Q9P289 416 aa18.4■□□□□ 0.54
SOD2-204ENST00000401980 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
SOD2-204ENST00000401980 ZEB1P37275 1124 aaPredicted RBP18.38■□□□□ 0.53
SOD2-204ENST00000401980 DEFB132Q7Z7B7 95 aa18.38■□□□□ 0.53
SOD2-204ENST00000401980 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
SOD2-204ENST00000401980 TECPR2O15040 1411 aa18.38■□□□□ 0.53
SOD2-204ENST00000401980 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
SOD2-204ENST00000401980 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
SOD2-204ENST00000401980 KIF1AQ12756 1690 aa18.36■□□□□ 0.53
SOD2-204ENST00000401980 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
SOD2-204ENST00000401980 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
SOD2-204ENST00000401980 ABCC11Q96J66 1382 aa18.35■□□□□ 0.53
SOD2-204ENST00000401980 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
SOD2-204ENST00000401980 KRT28Q7Z3Y7 464 aa18.35■□□□□ 0.53
SOD2-204ENST00000401980 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
SOD2-204ENST00000401980 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
SOD2-204ENST00000401980 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
SOD2-204ENST00000401980 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
SOD2-204ENST00000401980 IFT172Q9UG01 1749 aa18.33■□□□□ 0.52
SOD2-204ENST00000401980 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SOD2-204ENST00000401980 VPS72Q15906 364 aa18.33■□□□□ 0.52
SOD2-204ENST00000401980 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
SOD2-204ENST00000401980 ONECUT3O60422 494 aaPredicted RBP18.32■□□□□ 0.52
SOD2-204ENST00000401980 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
SOD2-204ENST00000401980 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
SOD2-204ENST00000401980 LRP5O75197 1615 aa18.31■□□□□ 0.52
SOD2-204ENST00000401980 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
SOD2-204ENST00000401980 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
SOD2-204ENST00000401980 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
SOD2-204ENST00000401980 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
SOD2-204ENST00000401980 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
SOD2-204ENST00000401980 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
SOD2-204ENST00000401980 TNS3Q68CZ2 1445 aa18.29■□□□□ 0.52
SOD2-204ENST00000401980 PSME1Q06323 249 aa18.28■□□□□ 0.52
SOD2-204ENST00000401980 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
SOD2-204ENST00000401980 STAC3Q96MF2 364 aa18.28■□□□□ 0.52
SOD2-204ENST00000401980 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
SOD2-204ENST00000401980 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
SOD2-204ENST00000401980 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
SOD2-204ENST00000401980 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
SOD2-204ENST00000401980 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
SOD2-204ENST00000401980 CFAP70Q5T0N1 1121 aa18.25■□□□□ 0.51
SOD2-204ENST00000401980 SBNO1A3KN83 1393 aa18.25■□□□□ 0.51
SOD2-204ENST00000401980 PSDA5PKW4 1024 aaPredicted RBP18.24■□□□□ 0.51
SOD2-204ENST00000401980 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
SOD2-204ENST00000401980 BAG6P46379 1132 aa18.23■□□□□ 0.51
SOD2-204ENST00000401980 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
SOD2-204ENST00000401980 ARHGEF10O15013 1369 aa18.22■□□□□ 0.51
SOD2-204ENST00000401980 NRAPQ86VF7 1730 aa18.22■□□□□ 0.51
SOD2-204ENST00000401980 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
SOD2-204ENST00000401980 A0A0G2JS52 829 aa18.2■□□□□ 0.5
SOD2-204ENST00000401980 MYT1Q01538 1121 aa18.2■□□□□ 0.5
SOD2-204ENST00000401980 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
SOD2-204ENST00000401980 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
SOD2-204ENST00000401980 SAFB2Q14151 953 aaKnown RBP eCLIP18.18■□□□□ 0.5
SOD2-204ENST00000401980 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms