RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FOXO3O43524 673 aa21.93■■□□□ 1.1
VAMP1-203ENST00000400911 XPCQ01831 940 aaPredicted RBP21.93■■□□□ 1.1
VAMP1-203ENST00000400911 FOXD1Q16676 465 aa21.93■■□□□ 1.1
VAMP1-203ENST00000400911 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
VAMP1-203ENST00000400911 STK26Q9P289 416 aa21.92■■□□□ 1.1
VAMP1-203ENST00000400911 LAMC1P11047 1609 aa21.91■■□□□ 1.1
VAMP1-203ENST00000400911 ADGRF5Q8IZF2 1346 aa21.91■■□□□ 1.1
VAMP1-203ENST00000400911 NUTM2FA1L443 756 aa21.91■■□□□ 1.1
VAMP1-203ENST00000400911 WAPLQ7Z5K2 1190 aa21.91■■□□□ 1.1
VAMP1-203ENST00000400911 ATRNO75882 1429 aa21.9■■□□□ 1.1
VAMP1-203ENST00000400911 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
VAMP1-203ENST00000400911 KIF1BO60333 1816 aa21.89■■□□□ 1.09
VAMP1-203ENST00000400911 MYOM2P54296 1465 aa21.87■■□□□ 1.09
VAMP1-203ENST00000400911 BCL9LQ86UU0 1499 aa21.86■■□□□ 1.09
VAMP1-203ENST00000400911 TMEM132EQ6IEE7 984 aa21.86■■□□□ 1.09
VAMP1-203ENST00000400911 EP400Q96L91 3159 aa21.86■■□□□ 1.09
VAMP1-203ENST00000400911 PXDNQ92626 1479 aa21.85■■□□□ 1.09
VAMP1-203ENST00000400911 GJD4Q96KN9 370 aaPredicted RBP21.85■■□□□ 1.09
VAMP1-203ENST00000400911 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
VAMP1-203ENST00000400911 ZRANB1Q9UGI0 708 aa21.84■■□□□ 1.09
VAMP1-203ENST00000400911 PLEKHH1Q9ULM0 1364 aa21.82■■□□□ 1.08
VAMP1-203ENST00000400911 COL22A1Q8NFW1 1626 aaPredicted RBP21.81■■□□□ 1.08
VAMP1-203ENST00000400911 CCDC125Q86Z20 511 aa21.81■■□□□ 1.08
VAMP1-203ENST00000400911 CDC42BPGQ6DT37 1551 aa21.81■■□□□ 1.08
VAMP1-203ENST00000400911 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
VAMP1-203ENST00000400911 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
VAMP1-203ENST00000400911 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
VAMP1-203ENST00000400911 MPHOSPH9Q99550 1183 aa21.79■■□□□ 1.08
VAMP1-203ENST00000400911 TECPR2O15040 1411 aa21.79■■□□□ 1.08
VAMP1-203ENST00000400911 SPATA31A3Q5VYP0 1347 aa21.79■■□□□ 1.08
VAMP1-203ENST00000400911 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
VAMP1-203ENST00000400911 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
VAMP1-203ENST00000400911 PPLO60437 1756 aa21.77■■□□□ 1.08
VAMP1-203ENST00000400911 KRT28Q7Z3Y7 464 aa21.77■■□□□ 1.08
VAMP1-203ENST00000400911 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
VAMP1-203ENST00000400911 SIRT1Q96EB6 747 aa21.73■■□□□ 1.07
VAMP1-203ENST00000400911 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
VAMP1-203ENST00000400911 YTHDC2Q9H6S0 1430 aaKnown RBP21.72■■□□□ 1.07
VAMP1-203ENST00000400911 RALGAPBQ86X10 1494 aa21.72■■□□□ 1.07
VAMP1-203ENST00000400911 HAP1P54257 671 aaPredicted RBP21.72■■□□□ 1.07
VAMP1-203ENST00000400911 CABLES1Q8TDN4 633 aa21.72■■□□□ 1.07
VAMP1-203ENST00000400911 PHF8Q9UPP1 1060 aa21.72■■□□□ 1.07
VAMP1-203ENST00000400911 SLIT2O94813 1529 aa21.71■■□□□ 1.07
VAMP1-203ENST00000400911 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
VAMP1-203ENST00000400911 PSME1Q06323 249 aa21.7■■□□□ 1.06
VAMP1-203ENST00000400911 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
VAMP1-203ENST00000400911 SEPT12Q8IYM1 358 aa21.69■■□□□ 1.06
VAMP1-203ENST00000400911 SAFB2Q14151 953 aaKnown RBP eCLIP21.68■■□□□ 1.06
VAMP1-203ENST00000400911 LMOD2Q6P5Q4 547 aa21.68■■□□□ 1.06
VAMP1-203ENST00000400911 VPS72Q15906 364 aa21.67■■□□□ 1.06
VAMP1-203ENST00000400911 DEFB132Q7Z7B7 95 aa21.67■■□□□ 1.06
VAMP1-203ENST00000400911 CCDC9Q9Y3X0 531 aaKnown RBP21.67■■□□□ 1.06
VAMP1-203ENST00000400911 BLMP54132 1417 aaPredicted RBP21.66■■□□□ 1.06
VAMP1-203ENST00000400911 PRAM1Q96QH2 718 aa21.66■■□□□ 1.06
VAMP1-203ENST00000400911 GLI3P10071 1580 aa21.65■■□□□ 1.06
VAMP1-203ENST00000400911 TNS3Q68CZ2 1445 aa21.64■■□□□ 1.06
VAMP1-203ENST00000400911 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
VAMP1-203ENST00000400911 ONECUT3O60422 494 aaPredicted RBP21.63■■□□□ 1.05
VAMP1-203ENST00000400911 SF3B2Q13435 895 aaKnown RBP21.63■■□□□ 1.05
VAMP1-203ENST00000400911 PMFBP1Q8TBY8 1022 aa21.63■■□□□ 1.05
VAMP1-203ENST00000400911 SBNO1A3KN83 1393 aa21.62■■□□□ 1.05
VAMP1-203ENST00000400911 FAM83GA6ND36 823 aa21.62■■□□□ 1.05
VAMP1-203ENST00000400911 FMN2Q9NZ56 1722 aa21.61■■□□□ 1.05
VAMP1-203ENST00000400911 POGKQ9P215 609 aa21.61■■□□□ 1.05
VAMP1-203ENST00000400911 MARF1Q9Y4F3 1742 aaKnown RBP21.6■■□□□ 1.05
VAMP1-203ENST00000400911 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
VAMP1-203ENST00000400911 KRT27Q7Z3Y8 459 aa21.6■■□□□ 1.05
VAMP1-203ENST00000400911 KIF1AQ12756 1690 aa21.6■■□□□ 1.05
VAMP1-203ENST00000400911 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
VAMP1-203ENST00000400911 ARHGEF10O15013 1369 aa21.59■■□□□ 1.05
VAMP1-203ENST00000400911 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.05
VAMP1-203ENST00000400911 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.04
VAMP1-203ENST00000400911 IFT172Q9UG01 1749 aa21.58■■□□□ 1.04
VAMP1-203ENST00000400911 A0A0G2JS52 829 aa21.56■■□□□ 1.04
VAMP1-203ENST00000400911 MYT1Q01538 1121 aa21.56■■□□□ 1.04
VAMP1-203ENST00000400911 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
VAMP1-203ENST00000400911 FAM98CQ17RN3 349 aaKnown RBP21.55■■□□□ 1.04
VAMP1-203ENST00000400911 BTG4Q9NY30 223 aa21.54■■□□□ 1.04
VAMP1-203ENST00000400911 TRAK1Q9UPV9 953 aa21.54■■□□□ 1.04
VAMP1-203ENST00000400911 ANKARQ7Z5J8 1434 aa21.52■■□□□ 1.04
VAMP1-203ENST00000400911 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.03
VAMP1-203ENST00000400911 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
VAMP1-203ENST00000400911 PRR36Q9H6K5 1346 aa21.5■■□□□ 1.03
VAMP1-203ENST00000400911 GPRASP1Q5JY77 1395 aa21.49■■□□□ 1.03
VAMP1-203ENST00000400911 PSDA5PKW4 1024 aaPredicted RBP21.49■■□□□ 1.03
VAMP1-203ENST00000400911 BAG6P46379 1132 aa21.49■■□□□ 1.03
VAMP1-203ENST00000400911 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
VAMP1-203ENST00000400911 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
VAMP1-203ENST00000400911 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
VAMP1-203ENST00000400911 FAM182BQ5T319 152 aa21.47■■□□□ 1.03
VAMP1-203ENST00000400911 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
VAMP1-203ENST00000400911 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
VAMP1-203ENST00000400911 BRWD3Q6RI45 1802 aa21.46■■□□□ 1.03
VAMP1-203ENST00000400911 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
VAMP1-203ENST00000400911 EN1Q05925 392 aaPredicted RBP21.45■■□□□ 1.02
VAMP1-203ENST00000400911 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
VAMP1-203ENST00000400911 SPATA31A5Q5VU36 1347 aa21.45■■□□□ 1.02
VAMP1-203ENST00000400911 SPATA31A7Q8IWB4 1347 aa21.45■■□□□ 1.02
VAMP1-203ENST00000400911 PLCH1Q4KWH8 1693 aa21.44■■□□□ 1.02
VAMP1-203ENST00000400911 NWD2Q9ULI1 1742 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms