RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RIPK4P57078 832 aa16.13■□□□□ 0.17
PPP4R1-202ENST00000400555 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
PPP4R1-202ENST00000400555 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
PPP4R1-202ENST00000400555 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
PPP4R1-202ENST00000400555 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 ZKSCAN2Q63HK3 967 aa16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 DZIP1LQ8IYY4 767 aaKnown RBP16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
PPP4R1-202ENST00000400555 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-202ENST00000400555 APBB1O00213 710 aa16.11■□□□□ 0.17
PPP4R1-202ENST00000400555 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
PPP4R1-202ENST00000400555 IDI1Q13907 227 aa16.1■□□□□ 0.17
PPP4R1-202ENST00000400555 CHD1O14646 1710 aa16.09■□□□□ 0.17
PPP4R1-202ENST00000400555 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
PPP4R1-202ENST00000400555 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
PPP4R1-202ENST00000400555 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
PPP4R1-202ENST00000400555 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.17
PPP4R1-202ENST00000400555 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-202ENST00000400555 CABP1Q9NZU7 370 aa16.08■□□□□ 0.16
PPP4R1-202ENST00000400555 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
PPP4R1-202ENST00000400555 MYO5CQ9NQX4 1742 aa16.07■□□□□ 0.16
PPP4R1-202ENST00000400555 PIK3C2GO75747 1445 aa16.07■□□□□ 0.16
PPP4R1-202ENST00000400555 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
PPP4R1-202ENST00000400555 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
PPP4R1-202ENST00000400555 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-202ENST00000400555 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-202ENST00000400555 TERF2IPQ9NYB0 399 aa16.06■□□□□ 0.16
PPP4R1-202ENST00000400555 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
PPP4R1-202ENST00000400555 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
PPP4R1-202ENST00000400555 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
PPP4R1-202ENST00000400555 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-202ENST00000400555 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 WDR63Q8IWG1 891 aa16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 UNC13BO14795 1591 aa16.03■□□□□ 0.16
PPP4R1-202ENST00000400555 TRIM27P14373 513 aa16.02■□□□□ 0.16
PPP4R1-202ENST00000400555 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
PPP4R1-202ENST00000400555 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.16
PPP4R1-202ENST00000400555 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-202ENST00000400555 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
PPP4R1-202ENST00000400555 E9PCH4 1651 aa16.01■□□□□ 0.15
PPP4R1-202ENST00000400555 CDK19Q9BWU1 502 aa16.01■□□□□ 0.15
PPP4R1-202ENST00000400555 ABCC1P33527 1531 aa16.01■□□□□ 0.15
PPP4R1-202ENST00000400555 CLTCL1P53675 1640 aa16■□□□□ 0.15
PPP4R1-202ENST00000400555 NGEFQ8N5V2 710 aa16■□□□□ 0.15
PPP4R1-202ENST00000400555 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 POLR3AO14802 1390 aaPredicted RBP15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 ATP7AQ04656 1500 aa15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 PTPRTO14522 1441 aa15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
PPP4R1-202ENST00000400555 FYB1O15117 783 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
PPP4R1-202ENST00000400555 IPO8O15397 1037 aaKnown RBP15.97■□□□□ 0.15
PPP4R1-202ENST00000400555 HSCBQ8IWL3 235 aa15.97■□□□□ 0.15
PPP4R1-202ENST00000400555 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
PPP4R1-202ENST00000400555 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
PPP4R1-202ENST00000400555 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
PPP4R1-202ENST00000400555 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
PPP4R1-202ENST00000400555 TRPM2O94759 1503 aa15.96■□□□□ 0.15
PPP4R1-202ENST00000400555 NCKAP5LQ9HCH0 1330 aa15.96■□□□□ 0.15
PPP4R1-202ENST00000400555 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
PPP4R1-202ENST00000400555 PLXNC1O60486 1568 aa15.96■□□□□ 0.15
PPP4R1-202ENST00000400555 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.14
PPP4R1-202ENST00000400555 INSRP06213 1382 aa15.95■□□□□ 0.14
PPP4R1-202ENST00000400555 TXNDC2Q86VQ3 553 aa15.95■□□□□ 0.14
PPP4R1-202ENST00000400555 ZFYVE16Q7Z3T8 1539 aa15.94■□□□□ 0.14
PPP4R1-202ENST00000400555 NPATQ14207 1427 aa15.94■□□□□ 0.14
PPP4R1-202ENST00000400555 USP19O94966 1318 aa15.94■□□□□ 0.14
PPP4R1-202ENST00000400555 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
PPP4R1-202ENST00000400555 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
PPP4R1-202ENST00000400555 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
PPP4R1-202ENST00000400555 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
PPP4R1-202ENST00000400555 A0A1W2PP64 1363 aa15.92■□□□□ 0.14
PPP4R1-202ENST00000400555 NME9Q86XW9 330 aa15.92■□□□□ 0.14
PPP4R1-202ENST00000400555 SYNMO15061 1565 aa15.92■□□□□ 0.14
PPP4R1-202ENST00000400555 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
PPP4R1-202ENST00000400555 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
PPP4R1-202ENST00000400555 TBC1D32Q96NH3 1257 aa15.91■□□□□ 0.14
PPP4R1-202ENST00000400555 NCLP19338 710 aaKnown RBP15.9■□□□□ 0.14
PPP4R1-202ENST00000400555 FAM69CQ0P6D2 419 aa15.9■□□□□ 0.14
PPP4R1-202ENST00000400555 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
PPP4R1-202ENST00000400555 SLC4A10Q6U841 1118 aa15.89■□□□□ 0.13
PPP4R1-202ENST00000400555 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
PPP4R1-202ENST00000400555 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
PPP4R1-202ENST00000400555 NECTIN2Q92692 538 aa15.89■□□□□ 0.13
PPP4R1-202ENST00000400555 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
PPP4R1-202ENST00000400555 ANKRD36BQ8N2N9 1353 aa15.88■□□□□ 0.13
PPP4R1-202ENST00000400555 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
PPP4R1-202ENST00000400555 KRT24Q2M2I5 525 aa15.87■□□□□ 0.13
PPP4R1-202ENST00000400555 SPHKAPQ2M3C7 1700 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms